co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM5G836910

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0035970: peptidyl-threonine dephosphorylation	0.00E+00
2	GO:0001561: fatty acid alpha-oxidation	0.00E+00
3	GO:2000505: regulation of energy homeostasis	0.00E+00
4	GO:0030243: cellulose metabolic process	0.00E+00
5	GO:1902609: (R)-2-hydroxy-alpha-linolenic acid biosynthetic process	0.00E+00
6	GO:0010207: photosystem II assembly	7.09E-07
7	GO:0019344: cysteine biosynthetic process	2.10E-06
8	GO:0010196: nonphotochemical quenching	8.51E-06
9	GO:0009657: plastid organization	1.04E-05
10	GO:0010155: regulation of proton transport	1.30E-05
11	GO:0006364: rRNA processing	1.44E-05
12	GO:0070838: divalent metal ion transport	1.62E-05
13	GO:0046777: protein autophosphorylation	1.93E-05
14	GO:0030003: cellular cation homeostasis	4.14E-05
15	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	7.02E-05
16	GO:0016117: carotenoid biosynthetic process	7.38E-05
17	GO:0019761: glucosinolate biosynthetic process	8.28E-05
18	GO:0071482: cellular response to light stimulus	1.43E-04
19	GO:0009590: detection of gravity	1.43E-04
20	GO:0009768: photosynthesis, light harvesting in photosystem I	1.43E-04
21	GO:0019253: reductive pentose-phosphate cycle	1.43E-04
22	GO:0019676: ammonia assimilation cycle	1.43E-04
23	GO:0009830: cell wall modification involved in abscission	1.43E-04
24	GO:0042742: defense response to bacterium	1.53E-04
25	GO:0009767: photosynthetic electron transport chain	2.44E-04
26	GO:0043085: positive regulation of catalytic activity	2.73E-04
27	GO:0006636: unsaturated fatty acid biosynthetic process	2.88E-04
28	GO:0010236: plastoquinone biosynthetic process	3.52E-04
29	GO:0009052: pentose-phosphate shunt, non-oxidative branch	3.52E-04
30	GO:0010106: cellular response to iron ion starvation	3.52E-04
31	GO:0009664: plant-type cell wall organization	4.42E-04
32	GO:0035304: regulation of protein dephosphorylation	5.63E-04
33	GO:0005986: sucrose biosynthetic process	6.05E-04
34	GO:0019252: starch biosynthetic process	6.13E-04
35	GO:0009817: defense response to fungus, incompatible interaction	6.28E-04
36	GO:0006098: pentose-phosphate shunt	8.29E-04
37	GO:0071704: organic substance metabolic process	8.95E-04
38	GO:0009595: detection of biotic stimulus	8.95E-04
39	GO:0015976: carbon utilization	8.95E-04
40	GO:0015979: photosynthesis	9.52E-04
41	GO:0043900: regulation of multi-organism process	1.22E-03
42	GO:0019748: secondary metabolic process	1.22E-03
43	GO:0006569: tryptophan catabolic process	1.22E-03
44	GO:0009637: response to blue light	1.30E-03
45	GO:0010114: response to red light	1.51E-03
46	GO:0006979: response to oxidative stress	1.64E-03
47	GO:0010218: response to far red light	1.73E-03
48	GO:0000023: maltose metabolic process	1.84E-03
49	GO:0009106: lipoate metabolic process	1.94E-03
50	GO:0006766: vitamin metabolic process	1.94E-03
51	GO:0009108: coenzyme biosynthetic process	1.94E-03
52	GO:0010167: response to nitrate	1.94E-03
53	GO:0015706: nitrate transport	1.94E-03
54	GO:0010206: photosystem II repair	1.94E-03
55	GO:0016311: dephosphorylation	2.08E-03
56	GO:0009744: response to sucrose	2.20E-03
57	GO:0046939: nucleotide phosphorylation	2.32E-03
58	GO:0000272: polysaccharide catabolic process	2.32E-03
59	GO:0010310: regulation of hydrogen peroxide metabolic process	2.32E-03
60	GO:0009832: plant-type cell wall biogenesis	3.19E-03
61	GO:0006826: iron ion transport	3.19E-03
62	GO:0009684: indoleacetic acid biosynthetic process	3.19E-03
63	GO:0005983: starch catabolic process	3.19E-03
64	GO:0006354: DNA-templated transcription, elongation	3.68E-03
65	GO:0006814: sodium ion transport	3.68E-03
66	GO:0006006: glucose metabolic process	3.68E-03
67	GO:0009697: salicylic acid biosynthetic process	3.68E-03
68	GO:0006546: glycine catabolic process	4.18E-03
69	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	4.18E-03
70	GO:0009765: photosynthesis, light harvesting	4.18E-03
71	GO:0050832: defense response to fungus	4.46E-03
72	GO:0042631: cellular response to water deprivation	4.70E-03
73	GO:0044262: cellular carbohydrate metabolic process	5.23E-03
74	GO:0006108: malate metabolic process	5.23E-03
75	GO:0010027: thylakoid membrane organization	5.24E-03
76	GO:0016049: cell growth	6.38E-03
77	GO:0006833: water transport	6.38E-03
78	GO:0009750: response to fructose	6.38E-03
79	GO:0016126: sterol biosynthetic process	7.00E-03
80	GO:0019684: photosynthesis, light reaction	7.00E-03
81	GO:0018298: protein-chromophore linkage	7.62E-03
82	GO:0010200: response to chitin	8.26E-03
83	GO:0006352: DNA-templated transcription, initiation	8.26E-03
84	GO:0009627: systemic acquired resistance	8.26E-03
85	GO:0006612: protein targeting to membrane	8.26E-03
86	GO:0010363: regulation of plant-type hypersensitive response	8.93E-03
87	GO:0006139: nucleobase-containing compound metabolic process	8.93E-03
88	GO:0009773: photosynthetic electron transport in photosystem I	8.93E-03
89	GO:0031348: negative regulation of defense response	9.61E-03
90	GO:0009695: jasmonic acid biosynthetic process	9.61E-03
91	GO:0009867: jasmonic acid mediated signaling pathway	9.61E-03
92	GO:0000165: MAPK cascade	1.25E-02
93	GO:0009735: response to cytokinin	1.41E-02
94	GO:0006662: glycerol ether metabolic process	1.49E-02
95	GO:0055114: oxidation-reduction process	1.65E-02
96	GO:0006099: tricarboxylic acid cycle	1.74E-02
97	GO:0009624: response to nematode	2.58E-02
98	GO:0015995: chlorophyll biosynthetic process	2.58E-02
99	GO:0009644: response to high light intensity	2.68E-02
100	GO:0022900: electron transport chain	2.78E-02
101	GO:0005975: carbohydrate metabolic process	2.93E-02
102	GO:0009416: response to light stimulus	4.24E-02

Rank	GO Term	Adjusted P value
1	GO:0010356: homogentisate geranylgeranyltransferase activity	0.00E+00
2	GO:0004614: phosphoglucomutase activity	0.00E+00
3	GO:0045157: electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity	0.00E+00
4	GO:0010355: homogentisate farnesyltransferase activity	0.00E+00
5	GO:0019200: carbohydrate kinase activity	0.00E+00
6	GO:0046554: malate dehydrogenase (NADP+) activity	0.00E+00
7	GO:0015131: oxaloacetate transmembrane transporter activity	0.00E+00
8	GO:0015139: alpha-ketoglutarate transmembrane transporter activity	0.00E+00
9	GO:0010357: homogentisate solanesyltransferase activity	0.00E+00
10	GO:0009496: plastoquinol--plastocyanin reductase activity	0.00E+00
11	GO:0003959: NADPH dehydrogenase activity	3.61E-06
12	GO:0004324: ferredoxin-NADP+ reductase activity	3.61E-06
13	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	8.51E-06
14	GO:0008266: poly(U) RNA binding	8.05E-05
15	GO:0050307: sucrose-phosphate phosphatase activity	1.43E-04
16	GO:0016679: oxidoreductase activity, acting on diphenols and related substances as donors	1.43E-04
17	GO:0015140: malate transmembrane transporter activity	1.43E-04
18	GO:0050661: NADP binding	1.83E-04
19	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	3.52E-04
20	GO:0004751: ribose-5-phosphate isomerase activity	3.52E-04
21	GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity	3.52E-04
22	GO:0004659: prenyltransferase activity	8.95E-04
23	GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity	8.95E-04
24	GO:0016868: intramolecular transferase activity, phosphotransferases	1.22E-03
25	GO:0016987: sigma factor activity	1.22E-03
26	GO:0004017: adenylate kinase activity	1.22E-03
27	GO:0004089: carbonate dehydratase activity	1.94E-03
28	GO:0019201: nucleotide kinase activity	1.94E-03
29	GO:0008121: ubiquinol-cytochrome-c reductase activity	1.94E-03
30	GO:0019205: nucleobase-containing compound kinase activity	1.94E-03
31	GO:0016615: malate dehydrogenase activity	1.94E-03
32	GO:0016791: phosphatase activity	1.96E-03
33	GO:0008047: enzyme activator activity	2.32E-03
34	GO:0030060: L-malate dehydrogenase activity	2.32E-03
35	GO:0016776: phosphotransferase activity, phosphate group as acceptor	2.73E-03
36	GO:0042578: phosphoric ester hydrolase activity	2.73E-03
37	GO:0003993: acid phosphatase activity	4.70E-03
38	GO:0050660: flavin adenine dinucleotide binding	7.09E-03
39	GO:0016168: chlorophyll binding	7.62E-03
40	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	9.61E-03
41	GO:0051537: 2 iron, 2 sulfur cluster binding	9.61E-03
42	GO:0004601: peroxidase activity	1.04E-02
43	GO:0000287: magnesium ion binding	1.20E-02
44	GO:0016853: isomerase activity	1.37E-02
45	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	1.49E-02
46	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	3.42E-02
47	GO:0015035: protein disulfide oxidoreductase activity	3.54E-02
48	GO:0051287: NAD binding	3.76E-02
49	GO:0051536: iron-sulfur cluster binding	3.88E-02
50	GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	4.48E-02
51	GO:0003824: catalytic activity	4.76E-02

Rank	GO Term	Adjusted P value
1	GO:0009571: proplastid stroma	0.00E+00
2	GO:0009783: photosystem II antenna complex	0.00E+00
3	GO:0009579: thylakoid	6.94E-11
4	GO:0009507: chloroplast	5.29E-10
5	GO:0009570: chloroplast stroma	3.45E-09
6	GO:0009941: chloroplast envelope	3.63E-08
7	GO:0009535: chloroplast thylakoid membrane	6.90E-07
8	GO:0042651: thylakoid membrane	4.93E-06
9	GO:0009522: photosystem I	1.93E-05
10	GO:0048046: apoplast	7.27E-05
11	GO:0031977: thylakoid lumen	1.03E-04
12	GO:0009517: PSII associated light-harvesting complex II	1.43E-04
13	GO:0010287: plastoglobule	2.16E-04
14	GO:0009534: chloroplast thylakoid	2.16E-04
15	GO:0009533: chloroplast stromal thylakoid	3.52E-04
16	GO:0012511: monolayer-surrounded lipid storage body	3.52E-04
17	GO:0009538: photosystem I reaction center	8.95E-04
18	GO:0010319: stromule	1.51E-03
19	GO:0009543: chloroplast thylakoid lumen	5.23E-03
20	GO:0009706: chloroplast inner membrane	1.10E-02
21	GO:0009536: plastid	3.88E-02