co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM5G802566

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1900865: chloroplast RNA modification	0.00E+00
2	GO:0010157: response to chlorate	0.00E+00
3	GO:0006591: ornithine metabolic process	0.00E+00
4	GO:0048564: photosystem I assembly	0.00E+00
5	GO:0046653: tetrahydrofolate metabolic process	0.00E+00
6	GO:0043953: protein transport by the Tat complex	0.00E+00
7	GO:0000372: Group I intron splicing	0.00E+00
8	GO:0010239: chloroplast mRNA processing	0.00E+00
9	GO:0046506: sulfolipid biosynthetic process	0.00E+00
10	GO:0010117: photoprotection	0.00E+00
11	GO:0009658: chloroplast organization	1.57E-08
12	GO:0006457: protein folding	2.33E-07
13	GO:1901671: positive regulation of superoxide dismutase activity	8.48E-06
14	GO:0010027: thylakoid membrane organization	1.10E-04
15	GO:0010468: regulation of gene expression	1.24E-04
16	GO:0010206: photosystem II repair	2.87E-04
17	GO:0006399: tRNA metabolic process	3.94E-04
18	GO:0009959: negative gravitropism	4.90E-04
19	GO:0006364: rRNA processing	6.12E-04
20	GO:0009642: response to light intensity	1.14E-03
21	GO:0030308: negative regulation of cell growth	1.14E-03
22	GO:0019481: L-alanine catabolic process, by transamination	1.14E-03
23	GO:0045036: protein targeting to chloroplast	1.20E-03
24	GO:0042793: transcription from plastid promoter	1.41E-03
25	GO:0008299: isoprenoid biosynthetic process	1.64E-03
26	GO:0051085: chaperone mediated protein folding requiring cofactor	1.91E-03
27	GO:0016075: rRNA catabolic process	1.91E-03
28	GO:0009231: riboflavin biosynthetic process	1.91E-03
29	GO:0009247: glycolipid biosynthetic process	1.91E-03
30	GO:0015867: ATP transport	1.91E-03
31	GO:0019760: glucosinolate metabolic process	1.91E-03
32	GO:0009627: systemic acquired resistance	2.71E-03
33	GO:0042026: protein refolding	2.76E-03
34	GO:0006782: protoporphyrinogen IX biosynthetic process	2.76E-03
35	GO:0019375: galactolipid biosynthetic process	2.76E-03
36	GO:0045038: protein import into chloroplast thylakoid membrane	2.76E-03
37	GO:0000373: Group II intron splicing	2.76E-03
38	GO:0010207: photosystem II assembly	3.30E-03
39	GO:0045893: positive regulation of transcription, DNA-templated	3.96E-03
40	GO:0006396: RNA processing	4.19E-03
41	GO:0006749: glutathione metabolic process	4.89E-03
42	GO:0031347: regulation of defense response	4.89E-03
43	GO:0009306: protein secretion	4.89E-03
44	GO:0006520: cellular amino acid metabolic process	4.98E-03
45	GO:0009902: chloroplast relocation	4.98E-03
46	GO:0006189: 'de novo' IMP biosynthetic process	6.09E-03
47	GO:0034660: ncRNA metabolic process	6.09E-03
48	GO:0019538: protein metabolic process	6.09E-03
49	GO:0032880: regulation of protein localization	6.09E-03
50	GO:0009704: de-etiolation	6.09E-03
51	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	7.29E-03
52	GO:0051604: protein maturation	7.39E-03
53	GO:0045087: innate immune response	8.79E-03
54	GO:0001666: response to hypoxia	8.79E-03
55	GO:0000302: response to reactive oxygen species	1.02E-02
56	GO:0009407: toxin catabolic process	1.02E-02
57	GO:0016556: mRNA modification	1.18E-02
58	GO:0045454: cell redox homeostasis	1.20E-02
59	GO:0006779: porphyrin-containing compound biosynthetic process	1.34E-02
60	GO:0006508: proteolysis	1.54E-02
61	GO:0051607: defense response to virus	1.69E-02
62	GO:0006655: phosphatidylglycerol biosynthetic process	1.69E-02
63	GO:0009630: gravitropism	2.07E-02
64	GO:0009058: biosynthetic process	2.20E-02
65	GO:0009657: plastid organization	2.27E-02
66	GO:0019684: photosynthesis, light reaction	2.27E-02
67	GO:0016036: cellular response to phosphate starvation	2.48E-02
68	GO:0035196: production of miRNAs involved in gene silencing by miRNA	2.48E-02
69	GO:0008219: cell death	2.48E-02
70	GO:0044267: cellular protein metabolic process	2.48E-02
71	GO:0010267: production of ta-siRNAs involved in RNA interference	2.48E-02
72	GO:0010103: stomatal complex morphogenesis	2.69E-02
73	GO:0009416: response to light stimulus	2.84E-02
74	GO:0006807: nitrogen compound metabolic process	2.91E-02
75	GO:0035304: regulation of protein dephosphorylation	2.91E-02
76	GO:0019252: starch biosynthetic process	2.95E-02
77	GO:0009409: response to cold	3.04E-02
78	GO:0006869: lipid transport	3.14E-02
79	GO:0009853: photorespiration	3.86E-02
80	GO:0006626: protein targeting to mitochondrion	4.11E-02
81	GO:0030163: protein catabolic process	4.36E-02
82	GO:0006184: obsolete GTP catabolic process	4.80E-02
83	GO:0009073: aromatic amino acid family biosynthetic process	4.89E-02
84	GO:0006662: glycerol ether metabolic process	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0004585: ornithine carbamoyltransferase activity	0.00E+00
2	GO:0008864: formyltetrahydrofolate deformylase activity	0.00E+00
3	GO:0009977: proton motive force dependent protein transmembrane transporter activity	0.00E+00
4	GO:0046507: UDPsulfoquinovose synthase activity	0.00E+00
5	GO:0003919: FMN adenylyltransferase activity	0.00E+00
6	GO:0016743: carboxyl- or carbamoyltransferase activity	3.04E-05
7	GO:0016817: hydrolase activity, acting on acid anhydrides	1.97E-04
8	GO:0051082: unfolded protein binding	2.82E-04
9	GO:0004525: ribonuclease III activity	2.87E-04
10	GO:0004362: glutathione-disulfide reductase activity	4.90E-04
11	GO:0008146: sulfotransferase activity	4.90E-04
12	GO:0046914: transition metal ion binding	8.22E-04
13	GO:0004252: serine-type endopeptidase activity	8.68E-04
14	GO:0016742: hydroxymethyl-, formyl- and related transferase activity	1.14E-03
15	GO:0047134: protein-disulfide reductase activity	1.14E-03
16	GO:0004853: uroporphyrinogen decarboxylase activity	1.14E-03
17	GO:0005347: ATP transmembrane transporter activity	1.14E-03
18	GO:0005496: steroid binding	1.14E-03
19	GO:0000774: adenyl-nucleotide exchange factor activity	1.91E-03
20	GO:0016668: oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor	2.76E-03
21	GO:0016597: amino acid binding	4.56E-03
22	GO:0008173: RNA methyltransferase activity	4.89E-03
23	GO:0005507: copper ion binding	6.14E-03
24	GO:0051087: chaperone binding	7.39E-03
25	GO:0008266: poly(U) RNA binding	8.79E-03
26	GO:0005525: GTP binding	1.13E-02
27	GO:0003690: double-stranded DNA binding	1.34E-02
28	GO:0016831: carboxy-lyase activity	2.07E-02
29	GO:0015035: protein disulfide oxidoreductase activity	2.20E-02
30	GO:0031072: heat shock protein binding	3.14E-02
31	GO:0008565: protein transporter activity	3.14E-02
32	GO:0004222: metalloendopeptidase activity	3.61E-02
33	GO:0030170: pyridoxal phosphate binding	4.66E-02
34	GO:0005524: ATP binding	4.79E-02

Rank	GO Term	Adjusted P value
1	GO:0009526: plastid envelope	0.00E+00
2	GO:0042646: plastid nucleoid	0.00E+00
3	GO:0009537: proplastid	0.00E+00
4	GO:0055035: plastid thylakoid membrane	0.00E+00
5	GO:0009513: etioplast	0.00E+00
6	GO:0009507: chloroplast	1.43E-12
7	GO:0009570: chloroplast stroma	2.38E-08
8	GO:0009941: chloroplast envelope	5.32E-06
9	GO:0009535: chloroplast thylakoid membrane	7.71E-06
10	GO:0009532: plastid stroma	9.51E-06
11	GO:0009579: thylakoid	2.60E-05
12	GO:0009509: chromoplast	4.90E-04
13	GO:0009533: chloroplast stromal thylakoid	1.14E-03
14	GO:0009840: chloroplastic endopeptidase Clp complex	3.78E-03
15	GO:0019898: extrinsic component of membrane	4.89E-03
16	GO:0005759: mitochondrial matrix	4.98E-03
17	GO:0009536: plastid	5.18E-03
18	GO:0009654: photosystem II oxygen evolving complex	6.09E-03
19	GO:0009501: amyloplast	6.09E-03
20	GO:0010319: stromule	8.01E-03
21	GO:0031977: thylakoid lumen	8.59E-03
22	GO:0005739: mitochondrion	1.10E-02
23	GO:0009295: nucleoid	1.34E-02
24	GO:0009534: chloroplast thylakoid	1.41E-02
25	GO:0042651: thylakoid membrane	1.69E-02
26	GO:0009543: chloroplast thylakoid lumen	1.69E-02
27	GO:0009706: chloroplast inner membrane	3.61E-02
28	GO:0009523: photosystem II	4.62E-02