co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G458824

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010270: photosystem II oxygen evolving complex assembly	0.00E+00
2	GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis	0.00E+00
3	GO:0043953: protein transport by the Tat complex	0.00E+00
4	GO:0010337: regulation of salicylic acid metabolic process	0.00E+00
5	GO:0046506: sulfolipid biosynthetic process	0.00E+00
6	GO:1901259: chloroplast rRNA processing	0.00E+00
7	GO:0009306: protein secretion	6.11E-07
8	GO:0010027: thylakoid membrane organization	6.73E-07
9	GO:0045038: protein import into chloroplast thylakoid membrane	2.34E-05
10	GO:0006399: tRNA metabolic process	1.50E-04
11	GO:0016050: vesicle organization	2.62E-04
12	GO:0009658: chloroplast organization	4.44E-04
13	GO:0045036: protein targeting to chloroplast	4.82E-04
14	GO:0006655: phosphatidylglycerol biosynthetic process	5.72E-04
15	GO:0043255: regulation of carbohydrate biosynthetic process	6.18E-04
16	GO:0009688: abscisic acid biosynthetic process	6.18E-04
17	GO:0005987: sucrose catabolic process	6.18E-04
18	GO:0006364: rRNA processing	7.93E-04
19	GO:0019760: glucosinolate metabolic process	1.06E-03
20	GO:0007186: G-protein coupled receptor signaling pathway	1.06E-03
21	GO:0010731: protein glutathionylation	1.06E-03
22	GO:0009247: glycolipid biosynthetic process	1.06E-03
23	GO:0010103: stomatal complex morphogenesis	1.14E-03
24	GO:0000373: Group II intron splicing	1.55E-03
25	GO:0071704: organic substance metabolic process	1.55E-03
26	GO:0006598: polyamine catabolic process	1.55E-03
27	GO:0045037: protein import into chloroplast stroma	1.55E-03
28	GO:0019375: galactolipid biosynthetic process	1.55E-03
29	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	2.34E-03
30	GO:0009735: response to cytokinin	2.43E-03
31	GO:0048229: gametophyte development	2.65E-03
32	GO:0000105: histidine biosynthetic process	2.65E-03
33	GO:0010583: response to cyclopentenone	3.31E-03
34	GO:0006032: chitin catabolic process	3.31E-03
35	GO:0010053: root epidermal cell differentiation	4.02E-03
36	GO:0006221: pyrimidine nucleotide biosynthetic process	4.77E-03
37	GO:0045087: innate immune response	4.77E-03
38	GO:0009684: indoleacetic acid biosynthetic process	5.55E-03
39	GO:0009407: toxin catabolic process	5.55E-03
40	GO:0009809: lignin biosynthetic process	5.55E-03
41	GO:0009567: double fertilization forming a zygote and endosperm	6.38E-03
42	GO:0016556: mRNA modification	6.38E-03
43	GO:0006200: obsolete ATP catabolic process	6.81E-03
44	GO:0009825: multidimensional cell growth	8.18E-03
45	GO:0016998: cell wall macromolecule catabolic process	8.18E-03
46	GO:0016042: lipid catabolic process	8.18E-03
47	GO:0010207: photosystem II assembly	8.29E-03
48	GO:0042793: transcription from plastid promoter	9.13E-03
49	GO:0005982: starch metabolic process	1.01E-02
50	GO:0008299: isoprenoid biosynthetic process	1.01E-02
51	GO:0009416: response to light stimulus	1.17E-02
52	GO:0019684: photosynthesis, light reaction	1.22E-02
53	GO:0016036: cellular response to phosphate starvation	1.33E-02
54	GO:0048825: cotyledon development	1.33E-02
55	GO:0010155: regulation of proton transport	1.33E-02
56	GO:0006417: regulation of translation	1.33E-02
57	GO:0006098: pentose-phosphate shunt	1.53E-02
58	GO:0035304: regulation of protein dephosphorylation	1.56E-02
59	GO:0009773: photosynthetic electron transport in photosystem I	1.56E-02
60	GO:0046777: protein autophosphorylation	1.56E-02
61	GO:0010182: sugar mediated signaling pathway	1.56E-02
62	GO:0051258: protein polymerization	1.68E-02
63	GO:0015979: photosynthesis	1.70E-02
64	GO:0007017: microtubule-based process	1.94E-02
65	GO:0006184: obsolete GTP catabolic process	2.00E-02
66	GO:0009902: chloroplast relocation	2.20E-02
67	GO:0009826: unidimensional cell growth	2.48E-02
68	GO:0009073: aromatic amino acid family biosynthetic process	2.62E-02
69	GO:0006662: glycerol ether metabolic process	2.62E-02
70	GO:0009637: response to blue light	2.76E-02
71	GO:0009790: embryo development	2.91E-02
72	GO:0010114: response to red light	3.06E-02
73	GO:0016226: iron-sulfur cluster assembly	3.22E-02
74	GO:0010218: response to far red light	3.37E-02
75	GO:0015995: chlorophyll biosynthetic process	4.55E-02
76	GO:0008652: cellular amino acid biosynthetic process	4.55E-02
77	GO:0006812: cation transport	4.55E-02

Rank	GO Term	Adjusted P value
1	GO:0009977: proton motive force dependent protein transmembrane transporter activity	0.00E+00
2	GO:0046507: UDPsulfoquinovose synthase activity	0.00E+00
3	GO:0043864: indoleacetamide hydrolase activity	0.00E+00
4	GO:0003879: ATP phosphoribosyltransferase activity	0.00E+00
5	GO:0070180: large ribosomal subunit rRNA binding	0.00E+00
6	GO:0008565: protein transporter activity	8.39E-05
7	GO:0008146: sulfotransferase activity	2.62E-04
8	GO:0033862: UMP kinase activity	2.62E-04
9	GO:0045174: glutathione dehydrogenase (ascorbate) activity	2.62E-04
10	GO:0046592: polyamine oxidase activity	6.18E-04
11	GO:0009041: uridylate kinase activity	1.06E-03
12	GO:0033926: glycopeptide alpha-N-acetylgalactosaminidase activity	1.55E-03
13	GO:0016868: intramolecular transferase activity, phosphotransferases	2.08E-03
14	GO:0016817: hydrolase activity, acting on acid anhydrides	2.65E-03
15	GO:0016884: carbon-nitrogen ligase activity, with glutamine as amido-N-donor	3.31E-03
16	GO:0004525: ribonuclease III activity	3.31E-03
17	GO:0004568: chitinase activity	3.31E-03
18	GO:0008047: enzyme activator activity	4.02E-03
19	GO:0004575: sucrose alpha-glucosidase activity	4.02E-03
20	GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	4.77E-03
21	GO:0008266: poly(U) RNA binding	4.77E-03
22	GO:0000287: magnesium ion binding	4.83E-03
23	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	5.55E-03
24	GO:0005216: ion channel activity	1.11E-02
25	GO:0016887: ATPase activity	1.13E-02
26	GO:0005200: structural constituent of cytoskeleton	1.45E-02
27	GO:0031072: heat shock protein binding	1.68E-02
28	GO:0005525: GTP binding	3.72E-02
29	GO:0008026: ATP-dependent helicase activity	4.37E-02

Rank	GO Term	Adjusted P value
1	GO:0031361: integral component of thylakoid membrane	0.00E+00
2	GO:0043235: receptor complex	0.00E+00
3	GO:0009507: chloroplast	4.64E-11
4	GO:0009535: chloroplast thylakoid membrane	1.35E-07
5	GO:0009527: plastid outer membrane	2.62E-04
6	GO:0019031: viral envelope	2.62E-04
7	GO:0044445: cytosolic part	2.62E-04
8	GO:0009528: plastid inner membrane	2.62E-04
9	GO:0010319: stromule	3.05E-04
10	GO:0009706: chloroplast inner membrane	1.74E-03
11	GO:0009941: chloroplast envelope	1.77E-03
12	GO:0009570: chloroplast stroma	1.96E-03
13	GO:0009508: plastid chromosome	2.08E-03
14	GO:0009523: photosystem II	2.43E-03
15	GO:0019898: extrinsic component of membrane	2.65E-03
16	GO:0009654: photosystem II oxygen evolving complex	3.31E-03
17	GO:0031977: thylakoid lumen	3.55E-03
18	GO:0009579: thylakoid	3.59E-03
19	GO:0009532: plastid stroma	4.02E-03
20	GO:0009534: chloroplast thylakoid	5.80E-03
21	GO:0009295: nucleoid	7.27E-03
22	GO:0009543: chloroplast thylakoid lumen	9.13E-03
23	GO:0019013: viral nucleocapsid	1.56E-02
24	GO:0043234: protein complex	1.81E-02
25	GO:0010287: plastoglobule	4.55E-02