co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G449496

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019676: ammonia assimilation cycle	0.00E+00
2	GO:0035436: triose phosphate transmembrane transport	0.00E+00
3	GO:0015714: phosphoenolpyruvate transport	0.00E+00
4	GO:0030243: cellulose metabolic process	0.00E+00
5	GO:0030388: fructose 1,6-bisphosphate metabolic process	0.00E+00
6	GO:0055070: copper ion homeostasis	0.00E+00
7	GO:0051188: cofactor biosynthetic process	0.00E+00
8	GO:0089722: phosphoenolpyruvate transmembrane transport	0.00E+00
9	GO:0042550: photosystem I stabilization	0.00E+00
10	GO:2000505: regulation of energy homeostasis	0.00E+00
11	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	0.00E+00
12	GO:0009780: photosynthetic NADP+ reduction	0.00E+00
13	GO:0042221: response to chemical	0.00E+00
14	GO:0015979: photosynthesis	2.88E-13
15	GO:0010207: photosystem II assembly	5.36E-12
16	GO:0009773: photosynthetic electron transport in photosystem I	6.05E-09
17	GO:0015995: chlorophyll biosynthetic process	3.56E-08
18	GO:0043085: positive regulation of catalytic activity	6.36E-08
19	GO:0016117: carotenoid biosynthetic process	9.35E-08
20	GO:0000023: maltose metabolic process	2.89E-07
21	GO:0019252: starch biosynthetic process	5.09E-07
22	GO:0006098: pentose-phosphate shunt	1.11E-06
23	GO:0006814: sodium ion transport	2.90E-05
24	GO:0009767: photosynthetic electron transport chain	7.06E-05
25	GO:0006364: rRNA processing	7.46E-05
26	GO:0010027: thylakoid membrane organization	9.31E-05
27	GO:0009416: response to light stimulus	9.31E-05
28	GO:0070838: divalent metal ion transport	1.13E-04
29	GO:0009772: photosynthetic electron transport in photosystem II	1.13E-04
30	GO:0010155: regulation of proton transport	1.68E-04
31	GO:0080167: response to karrikin	1.94E-04
32	GO:0010103: stomatal complex morphogenesis	2.01E-04
33	GO:0009411: response to UV	2.64E-04
34	GO:0010206: photosystem II repair	2.64E-04
35	GO:0030003: cellular cation homeostasis	2.64E-04
36	GO:0015986: ATP synthesis coupled proton transport	2.79E-04
37	GO:0015977: carbon fixation	4.78E-04
38	GO:0009902: chloroplast relocation	4.79E-04
39	GO:0019344: cysteine biosynthetic process	7.51E-04
40	GO:0009637: response to blue light	7.51E-04
41	GO:0016556: mRNA modification	7.58E-04
42	GO:0010114: response to red light	9.18E-04
43	GO:0006875: cellular metal ion homeostasis	1.08E-03
44	GO:0010218: response to far red light	1.11E-03
45	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	1.18E-03
46	GO:0042793: transcription from plastid promoter	1.30E-03
47	GO:0006833: water transport	1.75E-03
48	GO:0009750: response to fructose	1.75E-03
49	GO:0019760: glucosinolate metabolic process	1.82E-03
50	GO:0016024: CDP-diacylglycerol biosynthetic process	1.82E-03
51	GO:0051289: protein homotetramerization	1.82E-03
52	GO:0009624: response to nematode	1.91E-03
53	GO:0009657: plastid organization	1.99E-03
54	GO:0009409: response to cold	2.16E-03
55	GO:0022900: electron transport chain	2.18E-03
56	GO:0009966: regulation of signal transduction	2.24E-03
57	GO:0010196: nonphotochemical quenching	2.63E-03
58	GO:0050821: protein stabilization	2.63E-03
59	GO:0016485: protein processing	2.63E-03
60	GO:0006782: protoporphyrinogen IX biosynthetic process	2.63E-03
61	GO:0051260: protein homooligomerization	2.63E-03
62	GO:0009595: detection of biotic stimulus	2.63E-03
63	GO:0045037: protein import into chloroplast stroma	2.63E-03
64	GO:0046777: protein autophosphorylation	2.80E-03
65	GO:0006796: phosphate-containing compound metabolic process	3.59E-03
66	GO:0000096: sulfur amino acid metabolic process	3.59E-03
67	GO:0050790: regulation of catalytic activity	3.59E-03
68	GO:0009813: flavonoid biosynthetic process	3.59E-03
69	GO:0043900: regulation of multi-organism process	3.59E-03
70	GO:0034755: iron ion transmembrane transport	3.59E-03
71	GO:0007568: aging	3.59E-03
72	GO:0000413: protein peptidyl-prolyl isomerization	4.62E-03
73	GO:0046688: response to copper ion	4.65E-03
74	GO:0006542: glutamine biosynthetic process	4.65E-03
75	GO:0017148: negative regulation of translation	4.65E-03
76	GO:0006783: heme biosynthetic process	4.65E-03
77	GO:0006766: vitamin metabolic process	5.77E-03
78	GO:0009108: coenzyme biosynthetic process	5.77E-03
79	GO:0033014: tetrapyrrole biosynthetic process	5.77E-03
80	GO:0034660: ncRNA metabolic process	5.77E-03
81	GO:0009106: lipoate metabolic process	5.77E-03
82	GO:0055114: oxidation-reduction process	6.79E-03
83	GO:0010310: regulation of hydrogen peroxide metabolic process	7.01E-03
84	GO:0005985: sucrose metabolic process	7.01E-03
85	GO:0046939: nucleotide phosphorylation	7.01E-03
86	GO:0009072: aromatic amino acid family metabolic process	8.32E-03
87	GO:0009832: plant-type cell wall biogenesis	9.72E-03
88	GO:0006006: glucose metabolic process	1.12E-02
89	GO:0009697: salicylic acid biosynthetic process	1.12E-02
90	GO:0006754: ATP biosynthetic process	1.12E-02
91	GO:0006354: DNA-templated transcription, elongation	1.12E-02
92	GO:0006096: glycolytic process	1.13E-02
93	GO:0006546: glycine catabolic process	1.27E-02
94	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	1.27E-02
95	GO:0006779: porphyrin-containing compound biosynthetic process	1.27E-02
96	GO:0009644: response to high light intensity	1.37E-02
97	GO:0006108: malate metabolic process	1.60E-02
98	GO:0007030: Golgi organization	1.78E-02
99	GO:0006636: unsaturated fatty acid biosynthetic process	1.78E-02
100	GO:0006972: hyperosmotic response	1.97E-02
101	GO:0016049: cell growth	1.97E-02
102	GO:0019684: photosynthesis, light reaction	2.15E-02
103	GO:0015992: proton transport	2.15E-02
104	GO:0009749: response to glucose	2.15E-02
105	GO:0016126: sterol biosynthetic process	2.15E-02
106	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	2.35E-02
107	GO:0006612: protein targeting to membrane	2.55E-02
108	GO:0010200: response to chitin	2.55E-02
109	GO:0010363: regulation of plant-type hypersensitive response	2.76E-02
110	GO:0006807: nitrogen compound metabolic process	2.76E-02
111	GO:0010224: response to UV-B	2.76E-02
112	GO:0035304: regulation of protein dephosphorylation	2.76E-02
113	GO:0006139: nucleobase-containing compound metabolic process	2.76E-02
114	GO:0009867: jasmonic acid mediated signaling pathway	2.97E-02
115	GO:0009817: defense response to fungus, incompatible interaction	2.97E-02
116	GO:0031348: negative regulation of defense response	2.97E-02
117	GO:0009695: jasmonic acid biosynthetic process	2.97E-02
118	GO:0009853: photorespiration	3.65E-02
119	GO:0000165: MAPK cascade	3.89E-02
120	GO:0009735: response to cytokinin	4.38E-02
121	GO:0042742: defense response to bacterium	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0051738: xanthophyll binding	0.00E+00
2	GO:0015131: oxaloacetate transmembrane transporter activity	0.00E+00
3	GO:0015139: alpha-ketoglutarate transmembrane transporter activity	0.00E+00
4	GO:0015121: phosphoenolpyruvate:phosphate antiporter activity	0.00E+00
5	GO:0045550: geranylgeranyl reductase activity	0.00E+00
6	GO:0046863: ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity	0.00E+00
7	GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity	0.00E+00
8	GO:0030385: ferredoxin:thioredoxin reductase activity	0.00E+00
9	GO:0008937: ferredoxin-NAD(P) reductase activity	0.00E+00
10	GO:0004802: transketolase activity	0.00E+00
11	GO:0031679: NADH dehydrogenase (plastoquinone) activity	0.00E+00
12	GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors	0.00E+00
13	GO:0009670: triose-phosphate:phosphate antiporter activity	0.00E+00
14	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	3.09E-07
15	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	4.03E-05
16	GO:0016984: ribulose-bisphosphate carboxylase activity	6.25E-05
17	GO:0016168: chlorophyll binding	1.68E-04
18	GO:0051537: 2 iron, 2 sulfur cluster binding	2.79E-04
19	GO:0015088: copper uptake transmembrane transporter activity	4.65E-04
20	GO:0015140: malate transmembrane transporter activity	4.65E-04
21	GO:0008883: glutamyl-tRNA reductase activity	4.65E-04
22	GO:0004618: phosphoglycerate kinase activity	4.65E-04
23	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	4.65E-04
24	GO:0009055: electron carrier activity	7.76E-04
25	GO:0045430: chalcone isomerase activity	1.08E-03
26	GO:0004605: phosphatidate cytidylyltransferase activity	1.08E-03
27	GO:0051920: peroxiredoxin activity	1.08E-03
28	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	1.08E-03
29	GO:0016872: intramolecular lyase activity	1.82E-03
30	GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity	1.82E-03
31	GO:0016209: antioxidant activity	2.63E-03
32	GO:0071949: FAD binding	2.63E-03
33	GO:0004332: fructose-bisphosphate aldolase activity	2.63E-03
34	GO:0005215: transporter activity	3.02E-03
35	GO:0005381: iron ion transmembrane transporter activity	3.59E-03
36	GO:0004470: malic enzyme activity	3.59E-03
37	GO:0004017: adenylate kinase activity	3.59E-03
38	GO:0030234: enzyme regulator activity	3.59E-03
39	GO:0051536: iron-sulfur cluster binding	4.01E-03
40	GO:0004356: glutamate-ammonia ligase activity	4.65E-03
41	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	5.46E-03
42	GO:0016765: transferase activity, transferring alkyl or aryl (other than methyl) groups	5.77E-03
43	GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity	5.77E-03
44	GO:0019201: nucleotide kinase activity	5.77E-03
45	GO:0019205: nucleobase-containing compound kinase activity	5.77E-03
46	GO:0051087: chaperone binding	7.01E-03
47	GO:0016776: phosphotransferase activity, phosphate group as acceptor	8.32E-03
48	GO:0004427: inorganic diphosphatase activity	8.32E-03
49	GO:0042578: phosphoric ester hydrolase activity	8.32E-03
50	GO:0046914: transition metal ion binding	1.12E-02
51	GO:0050661: NADP binding	1.16E-02
52	GO:0043531: ADP binding	1.27E-02
53	GO:0042803: protein homodimerization activity	1.53E-02
54	GO:0046961: proton-transporting ATPase activity, rotational mechanism	1.78E-02
55	GO:0004713: protein tyrosine kinase activity	1.97E-02
56	GO:0008080: N-acetyltransferase activity	2.15E-02
57	GO:0051287: NAD binding	2.22E-02
58	GO:0015078: hydrogen ion transmembrane transporter activity	3.19E-02
59	GO:0016597: amino acid binding	3.65E-02
60	GO:0042802: identical protein binding	4.13E-02
61	GO:0051539: 4 iron, 4 sulfur cluster binding	4.13E-02
62	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	4.63E-02
63	GO:0008236: serine-type peptidase activity	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0009512: cytochrome b6f complex	0.00E+00
2	GO:0030093: chloroplast photosystem I	0.00E+00
3	GO:0009507: chloroplast	2.93E-25
4	GO:0009535: chloroplast thylakoid membrane	8.34E-24
5	GO:0009579: thylakoid	1.10E-18
6	GO:0009941: chloroplast envelope	3.91E-18
7	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	4.97E-11
8	GO:0009543: chloroplast thylakoid lumen	3.65E-10
9	GO:0009570: chloroplast stroma	1.37E-08
10	GO:0009534: chloroplast thylakoid	3.56E-08
11	GO:0031977: thylakoid lumen	1.88E-07
12	GO:0009522: photosystem I	2.97E-07
13	GO:0010287: plastoglobule	8.92E-07
14	GO:0009538: photosystem I reaction center	6.25E-05
15	GO:0010319: stromule	8.04E-05
16	GO:0048046: apoplast	1.67E-04
17	GO:0019898: extrinsic component of membrane	1.80E-04
18	GO:0009654: photosystem II oxygen evolving complex	2.64E-04
19	GO:0009706: chloroplast inner membrane	3.72E-04
20	GO:0009517: PSII associated light-harvesting complex II	4.65E-04
21	GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o)	4.65E-04
22	GO:0042406: extrinsic component of endoplasmic reticulum membrane	4.65E-04
23	GO:0009523: photosystem II	6.06E-04
24	GO:0016020: membrane	6.85E-04
25	GO:0009533: chloroplast stromal thylakoid	1.08E-03
26	GO:0009508: plastid chromosome	3.59E-03
27	GO:0009536: plastid	4.53E-03
28	GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1)	5.77E-03
29	GO:0009295: nucleoid	1.27E-02
30	GO:0042651: thylakoid membrane	1.60E-02