co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G402675

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0030494: bacteriochlorophyll biosynthetic process	0.00E+00
2	GO:0009658: chloroplast organization	1.15E-06
3	GO:0006788: heme oxidation	8.47E-05
4	GO:0018160: peptidyl-pyrromethane cofactor linkage	8.47E-05
5	GO:0032543: mitochondrial translation	8.47E-05
6	GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation	8.47E-05
7	GO:0042793: transcription from plastid promoter	1.12E-04
8	GO:0010024: phytochromobilin biosynthetic process	2.14E-04
9	GO:0010380: regulation of chlorophyll biosynthetic process	2.14E-04
10	GO:0010027: thylakoid membrane organization	2.20E-04
11	GO:0006457: protein folding	2.91E-04
12	GO:0006450: regulation of translational fidelity	3.74E-04
13	GO:0009247: glycolipid biosynthetic process	3.74E-04
14	GO:0000304: response to singlet oxygen	3.74E-04
15	GO:0009902: chloroplast relocation	4.59E-04
16	GO:0030259: lipid glycosylation	5.58E-04
17	GO:0045037: protein import into chloroplast stroma	5.58E-04
18	GO:0006353: DNA-templated transcription, termination	5.58E-04
19	GO:0019375: galactolipid biosynthetic process	5.58E-04
20	GO:0009098: leucine biosynthetic process	5.58E-04
21	GO:0045038: protein import into chloroplast thylakoid membrane	5.58E-04
22	GO:0019344: cysteine biosynthetic process	6.44E-04
23	GO:0006749: glutathione metabolic process	9.88E-04
24	GO:0033014: tetrapyrrole biosynthetic process	1.23E-03
25	GO:0015995: chlorophyll biosynthetic process	1.33E-03
26	GO:0009082: branched-chain amino acid biosynthetic process	1.48E-03
27	GO:0045087: innate immune response	1.75E-03
28	GO:0009407: toxin catabolic process	2.02E-03
29	GO:0045893: positive regulation of transcription, DNA-templated	2.15E-03
30	GO:0031408: oxylipin biosynthetic process	3.26E-03
31	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	3.43E-03
32	GO:0006633: fatty acid biosynthetic process	3.81E-03
33	GO:0030154: cell differentiation	4.37E-03
34	GO:0044267: cellular protein metabolic process	4.75E-03
35	GO:0010155: regulation of proton transport	4.75E-03
36	GO:0046777: protein autophosphorylation	5.55E-03
37	GO:0035304: regulation of protein dephosphorylation	5.55E-03
38	GO:0009695: jasmonic acid biosynthetic process	5.98E-03
39	GO:0009620: response to fungus	5.98E-03
40	GO:0006364: rRNA processing	6.03E-03
41	GO:0006626: protein targeting to mitochondrion	7.77E-03
42	GO:0009073: aromatic amino acid family biosynthetic process	9.23E-03
43	GO:0009220: pyrimidine ribonucleotide biosynthetic process	9.23E-03
44	GO:0016117: carotenoid biosynthetic process	9.73E-03
45	GO:0009637: response to blue light	9.73E-03
46	GO:0009790: embryo development	1.02E-02
47	GO:0010114: response to red light	1.08E-02
48	GO:0010218: response to far red light	1.19E-02
49	GO:0048481: plant ovule development	1.24E-02
50	GO:0009744: response to sucrose	1.41E-02
51	GO:0009644: response to high light intensity	1.65E-02
52	GO:0009965: leaf morphogenesis	1.85E-02
53	GO:0010207: photosystem II assembly	2.04E-02
54	GO:0009753: response to jasmonic acid	2.18E-02
55	GO:0009416: response to light stimulus	2.61E-02
56	GO:0006098: pentose-phosphate shunt	3.14E-02
57	GO:0009611: response to wounding	3.72E-02
58	GO:0045454: cell redox homeostasis	4.15E-02

Rank	GO Term	Adjusted P value
1	GO:0046408: chlorophyll synthetase activity	0.00E+00
2	GO:0000774: adenyl-nucleotide exchange factor activity	1.47E-06
3	GO:0051087: chaperone binding	2.55E-05
4	GO:0035250: UDP-galactosyltransferase activity	8.47E-05
5	GO:0004362: glutathione-disulfide reductase activity	8.47E-05
6	GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity	8.47E-05
7	GO:0031177: phosphopantetheine binding	8.47E-05
8	GO:0008194: UDP-glycosyltransferase activity	8.47E-05
9	GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	8.47E-05
10	GO:0004418: hydroxymethylbilane synthase activity	8.47E-05
11	GO:0003862: 3-isopropylmalate dehydrogenase activity	8.47E-05
12	GO:0004392: heme oxygenase (decyclizing) activity	2.14E-04
13	GO:0004659: prenyltransferase activity	5.58E-04
14	GO:0016668: oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor	5.58E-04
15	GO:0016884: carbon-nitrogen ligase activity, with glutamine as amido-N-donor	1.23E-03
16	GO:0042803: protein homodimerization activity	1.56E-03
17	GO:0008266: poly(U) RNA binding	1.75E-03
18	GO:0004527: exonuclease activity	3.62E-03
19	GO:0031072: heat shock protein binding	5.98E-03
20	GO:0042802: identical protein binding	8.25E-03
21	GO:0050661: NADP binding	1.47E-02
22	GO:0030246: carbohydrate binding	1.59E-02
23	GO:0016758: transferase activity, transferring hexosyl groups	1.59E-02
24	GO:0016746: transferase activity, transferring acyl groups	1.98E-02
25	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	2.11E-02
26	GO:0005507: copper ion binding	2.15E-02
27	GO:0051287: NAD binding	2.32E-02
28	GO:0004252: serine-type endopeptidase activity	2.61E-02
29	GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	2.76E-02
30	GO:0050660: flavin adenine dinucleotide binding	3.22E-02
31	GO:0051082: unfolded protein binding	3.55E-02
32	GO:0000287: magnesium ion binding	4.69E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	3.30E-08
2	GO:0009941: chloroplast envelope	2.01E-07
3	GO:0080085: signal recognition particle, chloroplast targeting	8.47E-05
4	GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex	8.47E-05
5	GO:0009706: chloroplast inner membrane	3.78E-04
6	GO:0005759: mitochondrial matrix	4.59E-04
7	GO:0009840: chloroplastic endopeptidase Clp complex	7.61E-04
8	GO:0009535: chloroplast thylakoid membrane	1.08E-03
9	GO:0009534: chloroplast thylakoid	1.33E-03
10	GO:0009570: chloroplast stroma	1.41E-03
11	GO:0009536: plastid	3.15E-03
12	GO:0010319: stromule	1.08E-02
13	GO:0009579: thylakoid	1.59E-02
14	GO:0010287: plastoglobule	1.59E-02
15	GO:0005739: mitochondrion	2.48E-02