co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G383088

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042221: response to chemical	0.00E+00
2	GO:0042549: photosystem II stabilization	0.00E+00
3	GO:0030388: fructose 1,6-bisphosphate metabolic process	0.00E+00
4	GO:0055070: copper ion homeostasis	0.00E+00
5	GO:0035970: peptidyl-threonine dephosphorylation	0.00E+00
6	GO:0042550: photosystem I stabilization	0.00E+00
7	GO:2000505: regulation of energy homeostasis	0.00E+00
8	GO:0009780: photosynthetic NADP+ reduction	0.00E+00
9	GO:0010207: photosystem II assembly	6.58E-19
10	GO:0015979: photosynthesis	1.41E-16
11	GO:0009773: photosynthetic electron transport in photosystem I	8.95E-13
12	GO:0043085: positive regulation of catalytic activity	1.27E-12
13	GO:0006364: rRNA processing	6.76E-11
14	GO:0019252: starch biosynthetic process	7.57E-10
15	GO:0006098: pentose-phosphate shunt	2.11E-09
16	GO:0070838: divalent metal ion transport	3.82E-09
17	GO:0000023: maltose metabolic process	7.08E-09
18	GO:0030003: cellular cation homeostasis	3.37E-08
19	GO:0009657: plastid organization	8.65E-08
20	GO:0010027: thylakoid membrane organization	3.36E-07
21	GO:0009772: photosynthetic electron transport in photosystem II	9.73E-07
22	GO:0010103: stomatal complex morphogenesis	7.15E-06
23	GO:0035304: regulation of protein dephosphorylation	9.17E-06
24	GO:0015986: ATP synthesis coupled proton transport	1.16E-05
25	GO:0015995: chlorophyll biosynthetic process	1.44E-05
26	GO:0019344: cysteine biosynthetic process	5.16E-05
27	GO:0016117: carotenoid biosynthetic process	5.16E-05
28	GO:0009637: response to blue light	5.16E-05
29	GO:0010196: nonphotochemical quenching	5.69E-05
30	GO:0009595: detection of biotic stimulus	5.69E-05
31	GO:0019761: glucosinolate biosynthetic process	6.00E-05
32	GO:0010114: response to red light	6.90E-05
33	GO:0010218: response to far red light	9.01E-05
34	GO:0043900: regulation of multi-organism process	1.03E-04
35	GO:0042742: defense response to bacterium	1.29E-04
36	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	1.40E-04
37	GO:0046777: protein autophosphorylation	2.12E-04
38	GO:0010310: regulation of hydrogen peroxide metabolic process	3.35E-04
39	GO:0009902: chloroplast relocation	4.31E-04
40	GO:0009590: detection of gravity	4.39E-04
41	GO:0009768: photosynthesis, light harvesting in photosystem I	4.39E-04
42	GO:0071482: cellular response to light stimulus	4.39E-04
43	GO:0016556: mRNA modification	6.98E-04
44	GO:0009697: salicylic acid biosynthetic process	6.98E-04
45	GO:0006754: ATP biosynthetic process	6.98E-04
46	GO:0006814: sodium ion transport	6.98E-04
47	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	8.52E-04
48	GO:0006875: cellular metal ion homeostasis	1.03E-03
49	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	1.03E-03
50	GO:0080167: response to karrikin	1.16E-03
51	GO:0006108: malate metabolic process	1.21E-03
52	GO:0051289: protein homotetramerization	1.73E-03
53	GO:0019760: glucosinolate metabolic process	1.73E-03
54	GO:0006733: oxidoreduction coenzyme metabolic process	1.73E-03
55	GO:0019684: photosynthesis, light reaction	1.84E-03
56	GO:0015992: proton transport	1.84E-03
57	GO:0009409: response to cold	1.85E-03
58	GO:0010155: regulation of proton transport	2.08E-03
59	GO:0009664: plant-type cell wall organization	2.08E-03
60	GO:0009966: regulation of signal transduction	2.08E-03
61	GO:0006612: protein targeting to membrane	2.32E-03
62	GO:0010200: response to chitin	2.32E-03
63	GO:0045037: protein import into chloroplast stroma	2.49E-03
64	GO:0015976: carbon utilization	2.49E-03
65	GO:0050821: protein stabilization	2.49E-03
66	GO:0016485: protein processing	2.49E-03
67	GO:0071704: organic substance metabolic process	2.49E-03
68	GO:0046034: ATP metabolic process	2.49E-03
69	GO:0019216: regulation of lipid metabolic process	2.49E-03
70	GO:0051260: protein homooligomerization	2.49E-03
71	GO:0009117: nucleotide metabolic process	2.49E-03
72	GO:0010363: regulation of plant-type hypersensitive response	2.59E-03
73	GO:0009867: jasmonic acid mediated signaling pathway	2.89E-03
74	GO:0009817: defense response to fungus, incompatible interaction	2.89E-03
75	GO:0031348: negative regulation of defense response	2.89E-03
76	GO:0019748: secondary metabolic process	3.39E-03
77	GO:0006796: phosphate-containing compound metabolic process	3.39E-03
78	GO:0034755: iron ion transmembrane transport	3.39E-03
79	GO:0000165: MAPK cascade	4.27E-03
80	GO:0009693: ethylene biosynthetic process	4.40E-03
81	GO:0046688: response to copper ion	4.40E-03
82	GO:0017148: negative regulation of translation	4.40E-03
83	GO:0006766: vitamin metabolic process	5.46E-03
84	GO:0006662: glycerol ether metabolic process	5.46E-03
85	GO:0009411: response to UV	5.46E-03
86	GO:0009108: coenzyme biosynthetic process	5.46E-03
87	GO:0010206: photosystem II repair	5.46E-03
88	GO:0009106: lipoate metabolic process	5.46E-03
89	GO:0010205: photoinhibition	5.46E-03
90	GO:0006811: ion transport	6.37E-03
91	GO:0046939: nucleotide phosphorylation	6.63E-03
92	GO:0000272: polysaccharide catabolic process	6.63E-03
93	GO:0005985: sucrose metabolic process	6.63E-03
94	GO:0015977: carbon fixation	7.88E-03
95	GO:0009072: aromatic amino acid family metabolic process	7.88E-03
96	GO:0009658: chloroplast organization	8.96E-03
97	GO:0005983: starch catabolic process	9.20E-03
98	GO:0045454: cell redox homeostasis	9.84E-03
99	GO:0006006: glucose metabolic process	1.06E-02
100	GO:0006354: DNA-templated transcription, elongation	1.06E-02
101	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	1.20E-02
102	GO:0009624: response to nematode	1.20E-02
103	GO:0006546: glycine catabolic process	1.20E-02
104	GO:0009765: photosynthesis, light harvesting	1.20E-02
105	GO:0022900: electron transport chain	1.34E-02
106	GO:0042631: cellular response to water deprivation	1.36E-02
107	GO:0009767: photosynthetic electron transport chain	1.52E-02
108	GO:0031408: oxylipin biosynthetic process	1.52E-02
109	GO:0044262: cellular carbohydrate metabolic process	1.52E-02
110	GO:0006636: unsaturated fatty acid biosynthetic process	1.68E-02
111	GO:0006979: response to oxidative stress	1.73E-02
112	GO:0009749: response to glucose	2.04E-02
113	GO:0050832: defense response to fungus	2.06E-02
114	GO:0018298: protein-chromophore linkage	2.22E-02
115	GO:0006352: DNA-templated transcription, initiation	2.41E-02
116	GO:0010193: response to ozone	2.41E-02
117	GO:0055114: oxidation-reduction process	2.48E-02
118	GO:0006139: nucleobase-containing compound metabolic process	2.61E-02
119	GO:0009695: jasmonic acid biosynthetic process	2.81E-02
120	GO:0015991: ATP hydrolysis coupled proton transport	3.02E-02
121	GO:0000413: protein peptidyl-prolyl isomerization	3.68E-02
122	GO:0006520: cellular amino acid metabolic process	3.68E-02
123	GO:0009735: response to cytokinin	4.14E-02
124	GO:0006096: glycolytic process	4.79E-02

Rank	GO Term	Adjusted P value
1	GO:0046554: malate dehydrogenase (NADP+) activity	0.00E+00
2	GO:0051738: xanthophyll binding	0.00E+00
3	GO:0009496: plastoquinol--plastocyanin reductase activity	0.00E+00
4	GO:0010242: oxygen evolving activity	0.00E+00
5	GO:0030385: ferredoxin:thioredoxin reductase activity	0.00E+00
6	GO:0004614: phosphoglucomutase activity	0.00E+00
7	GO:0008937: ferredoxin-NAD(P) reductase activity	0.00E+00
8	GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors	0.00E+00
9	GO:0019200: carbohydrate kinase activity	0.00E+00
10	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	6.90E-07
11	GO:0016168: chlorophyll binding	5.49E-06
12	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	6.96E-06
13	GO:0016679: oxidoreductase activity, acting on diphenols and related substances as donors	4.39E-04
14	GO:0004618: phosphoglycerate kinase activity	4.39E-04
15	GO:0015088: copper uptake transmembrane transporter activity	4.39E-04
16	GO:0042578: phosphoric ester hydrolase activity	4.41E-04
17	GO:0008266: poly(U) RNA binding	4.41E-04
18	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	5.62E-04
19	GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity	1.03E-03
20	GO:0051920: peroxiredoxin activity	1.03E-03
21	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	1.03E-03
22	GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity	1.73E-03
23	GO:0009055: electron carrier activity	2.48E-03
24	GO:0016984: ribulose-bisphosphate carboxylase activity	2.49E-03
25	GO:0016209: antioxidant activity	2.49E-03
26	GO:0004332: fructose-bisphosphate aldolase activity	2.49E-03
27	GO:0051537: 2 iron, 2 sulfur cluster binding	2.89E-03
28	GO:0015035: protein disulfide oxidoreductase activity	3.04E-03
29	GO:0016987: sigma factor activity	3.39E-03
30	GO:0005381: iron ion transmembrane transporter activity	3.39E-03
31	GO:0004470: malic enzyme activity	3.39E-03
32	GO:0004017: adenylate kinase activity	3.39E-03
33	GO:0016868: intramolecular transferase activity, phosphotransferases	3.39E-03
34	GO:0051287: NAD binding	3.41E-03
35	GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	4.70E-03
36	GO:0019201: nucleotide kinase activity	5.46E-03
37	GO:0008121: ubiquinol-cytochrome-c reductase activity	5.46E-03
38	GO:0019205: nucleobase-containing compound kinase activity	5.46E-03
39	GO:0016615: malate dehydrogenase activity	5.46E-03
40	GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity	5.46E-03
41	GO:0004089: carbonate dehydratase activity	5.46E-03
42	GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances	6.63E-03
43	GO:0008047: enzyme activator activity	6.63E-03
44	GO:0030060: L-malate dehydrogenase activity	6.63E-03
45	GO:0004427: inorganic diphosphatase activity	7.88E-03
46	GO:0016776: phosphotransferase activity, phosphate group as acceptor	7.88E-03
47	GO:0048037: cofactor binding	1.20E-02
48	GO:0000287: magnesium ion binding	1.23E-02
49	GO:0042803: protein homodimerization activity	1.41E-02
50	GO:0046961: proton-transporting ATPase activity, rotational mechanism	1.68E-02
51	GO:0004713: protein tyrosine kinase activity	1.86E-02
52	GO:0008080: N-acetyltransferase activity	2.04E-02
53	GO:0051536: iron-sulfur cluster binding	2.15E-02
54	GO:0015078: hydrogen ion transmembrane transporter activity	3.02E-02
55	GO:0016597: amino acid binding	3.45E-02
56	GO:0051539: 4 iron, 4 sulfur cluster binding	3.91E-02
57	GO:0008483: transaminase activity	3.91E-02
58	GO:0005215: transporter activity	4.03E-02
59	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.14E-02
60	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	4.38E-02
61	GO:0004601: peroxidase activity	4.79E-02

Rank	GO Term	Adjusted P value
1	GO:0009279: cell outer membrane	0.00E+00
2	GO:0009512: cytochrome b6f complex	0.00E+00
3	GO:0030093: chloroplast photosystem I	0.00E+00
4	GO:0009507: chloroplast	4.47E-32
5	GO:0009579: thylakoid	3.21E-28
6	GO:0009535: chloroplast thylakoid membrane	3.33E-27
7	GO:0009941: chloroplast envelope	8.83E-20
8	GO:0009522: photosystem I	8.93E-15
9	GO:0010287: plastoglobule	1.08E-14
10	GO:0031977: thylakoid lumen	1.02E-10
11	GO:0009538: photosystem I reaction center	6.58E-10
12	GO:0009534: chloroplast thylakoid	8.53E-10
13	GO:0009570: chloroplast stroma	9.04E-10
14	GO:0009543: chloroplast thylakoid lumen	2.45E-08
15	GO:0010319: stromule	1.18E-07
16	GO:0048046: apoplast	3.11E-07
17	GO:0009523: photosystem II	1.50E-06
18	GO:0019898: extrinsic component of membrane	2.20E-06
19	GO:0009654: photosystem II oxygen evolving complex	4.22E-06
20	GO:0009508: plastid chromosome	1.03E-04
21	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	1.65E-04
22	GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1)	2.42E-04
23	GO:0009706: chloroplast inner membrane	3.32E-04
24	GO:0016020: membrane	4.25E-04
25	GO:0009517: PSII associated light-harvesting complex II	4.39E-04
26	GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o)	4.39E-04
27	GO:0009295: nucleoid	8.52E-04
28	GO:0009533: chloroplast stromal thylakoid	1.03E-03
29	GO:0042651: thylakoid membrane	1.21E-03
30	GO:0033178: proton-transporting two-sector ATPase complex, catalytic domain	6.63E-03