Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G347836

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0035970: peptidyl-threonine dephosphorylation0.00E+00
2GO:0010269: response to selenium ion0.00E+00
3GO:0018283: iron incorporation into metallo-sulfur cluster0.00E+00
4GO:0042549: photosystem II stabilization0.00E+00
5GO:0010196: nonphotochemical quenching1.83E-09
6GO:0010207: photosystem II assembly1.04E-06
7GO:0035304: regulation of protein dephosphorylation1.81E-06
8GO:0010205: photoinhibition7.41E-06
9GO:0016117: carotenoid biosynthetic process7.57E-06
10GO:0006364: rRNA processing1.29E-05
11GO:0001887: selenium compound metabolic process4.98E-05
12GO:0006534: cysteine metabolic process4.98E-05
13GO:0071482: cellular response to light stimulus4.98E-05
14GO:0010027: thylakoid membrane organization7.75E-05
15GO:0009657: plastid organization8.37E-05
16GO:0010155: regulation of proton transport9.70E-05
17GO:0009773: photosynthetic electron transport in photosystem I1.27E-04
18GO:0010236: plastoquinone biosynthetic process1.29E-04
19GO:0015979: photosynthesis1.36E-04
20GO:0005986: sucrose biosynthetic process2.30E-04
21GO:0006662: glycerol ether metabolic process2.90E-04
22GO:0019344: cysteine biosynthetic process3.15E-04
23GO:0009637: response to blue light3.15E-04
24GO:0006790: sulfur compound metabolic process3.47E-04
25GO:0010114: response to red light3.68E-04
26GO:0010218: response to far red light4.25E-04
27GO:0010206: photosystem II repair7.69E-04
28GO:0034660: ncRNA metabolic process7.69E-04
29GO:0055072: iron ion homeostasis7.69E-04
30GO:0043085: positive regulation of catalytic activity7.78E-04
31GO:0042742: defense response to bacterium1.08E-03
32GO:0000302: response to reactive oxygen species1.29E-03
33GO:0010039: response to iron ion1.68E-03
34GO:0009765: photosynthesis, light harvesting1.68E-03
35GO:0006098: pentose-phosphate shunt1.76E-03
36GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway1.76E-03
37GO:0008152: metabolic process1.88E-03
38GO:0042631: cellular response to water deprivation1.88E-03
39GO:0006636: unsaturated fatty acid biosynthetic process2.28E-03
40GO:0045454: cell redox homeostasis2.55E-03
41GO:0019684: photosynthesis, light reaction2.73E-03
42GO:0018298: protein-chromophore linkage2.97E-03
43GO:0010103: stomatal complex morphogenesis3.22E-03
44GO:0046777: protein autophosphorylation3.49E-03
45GO:0009902: chloroplast relocation4.87E-03
46GO:0030163: protein catabolic process5.16E-03
47GO:0009073: aromatic amino acid family biosynthetic process5.77E-03
48GO:0019761: glucosinolate biosynthetic process6.40E-03
49GO:0000023: maltose metabolic process7.76E-03
50GO:0016311: dephosphorylation8.45E-03
51GO:0009744: response to sucrose8.82E-03
52GO:0009624: response to nematode9.94E-03
53GO:0015995: chlorophyll biosynthetic process9.94E-03
54GO:0009644: response to high light intensity1.03E-02
55GO:0022900: electron transport chain1.07E-02
56GO:0009409: response to cold1.35E-02
57GO:0019252: starch biosynthetic process1.67E-02
58GO:0080167: response to karrikin2.05E-02
59GO:0005975: carbohydrate metabolic process2.84E-02
RankGO TermAdjusted P value
1GO:0010357: homogentisate solanesyltransferase activity0.00E+00
2GO:0009496: plastoquinol--plastocyanin reductase activity0.00E+00
3GO:0010242: oxygen evolving activity0.00E+00
4GO:0010356: homogentisate geranylgeranyltransferase activity0.00E+00
5GO:0010355: homogentisate farnesyltransferase activity0.00E+00
6GO:0009000: selenocysteine lyase activity0.00E+00
7GO:0050307: sucrose-phosphate phosphatase activity4.98E-05
8GO:0004750: ribulose-phosphate 3-epimerase activity4.98E-05
9GO:0008974: phosphoribulokinase activity4.98E-05
10GO:0016679: oxidoreductase activity, acting on diphenols and related substances as donors4.98E-05
11GO:0031071: cysteine desulfurase activity4.98E-05
12GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity1.29E-04
13GO:0004659: prenyltransferase activity3.47E-04
14GO:0016857: racemase and epimerase activity, acting on carbohydrates and derivatives4.75E-04
15GO:0008121: ubiquinol-cytochrome-c reductase activity7.69E-04
16GO:0008047: enzyme activator activity9.34E-04
17GO:0015035: protein disulfide oxidoreductase activity1.05E-03
18GO:0008266: poly(U) RNA binding1.11E-03
19GO:0003993: acid phosphatase activity1.88E-03
20GO:0003824: catalytic activity2.82E-03
21GO:0016168: chlorophyll binding2.97E-03
22GO:0016853: isomerase activity3.48E-03
23GO:0051537: 2 iron, 2 sulfur cluster binding3.75E-03
24GO:0004222: metalloendopeptidase activity4.31E-03
25GO:0010181: FMN binding5.77E-03
26GO:0016791: phosphatase activity8.10E-03
27GO:0051536: iron-sulfur cluster binding1.49E-02
28GO:0050662: coenzyme binding2.15E-02
29GO:0030170: pyridoxal phosphate binding2.30E-02
30GO:0000287: magnesium ion binding2.90E-02
31GO:0017111: nucleoside-triphosphatase activity3.74E-02
RankGO TermAdjusted P value
1GO:0009783: photosystem II antenna complex0.00E+00
2GO:0009279: cell outer membrane0.00E+00
3GO:0009579: thylakoid1.02E-10
4GO:0009507: chloroplast1.01E-08
5GO:0009535: chloroplast thylakoid membrane1.51E-06
6GO:0031977: thylakoid lumen1.10E-05
7GO:0009534: chloroplast thylakoid2.51E-05
8GO:0010287: plastoglobule2.51E-05
9GO:0009570: chloroplast stroma4.07E-05
10GO:0009517: PSII associated light-harvesting complex II4.98E-05
11GO:0042651: thylakoid membrane5.04E-05
12GO:0009543: chloroplast thylakoid lumen5.04E-05
13GO:0009533: chloroplast stromal thylakoid1.29E-04
14GO:0009941: chloroplast envelope3.27E-04
15GO:0010319: stromule3.68E-04
16GO:0019898: extrinsic component of membrane6.17E-04
17GO:0009654: photosystem II oxygen evolving complex7.69E-04
18GO:0048046: apoplast2.32E-03
19GO:0009522: photosystem I3.49E-03
20GO:0009523: photosystem II5.46E-03