co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G347623

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0043137: DNA replication, removal of RNA primer	0.00E+00
2	GO:0071586: CAAX-box protein processing	0.00E+00
3	GO:0045694: regulation of embryo sac egg cell differentiation	0.00E+00
4	GO:0080120: CAAX-box protein maturation	0.00E+00
5	GO:0010389: regulation of G2/M transition of mitotic cell cycle	6.25E-07
6	GO:0010074: maintenance of meristem identity	1.72E-05
7	GO:0048449: floral organ formation	1.72E-05
8	GO:0019915: lipid storage	5.22E-05
9	GO:0016571: histone methylation	6.43E-05
10	GO:0003002: regionalization	6.64E-05
11	GO:0030307: positive regulation of cell growth	6.64E-05
12	GO:1990426: mitotic recombination-dependent replication fork processing	6.64E-05
13	GO:0007112: male meiosis cytokinesis	6.64E-05
14	GO:0006406: mRNA export from nucleus	7.79E-05
15	GO:0010162: seed dormancy process	9.31E-05
16	GO:0045893: positive regulation of transcription, DNA-templated	9.96E-05
17	GO:0050826: response to freezing	1.10E-04
18	GO:0009909: regulation of flower development	1.37E-04
19	GO:0009755: hormone-mediated signaling pathway	1.69E-04
20	GO:0018279: protein N-linked glycosylation via asparagine	1.69E-04
21	GO:0010182: sugar mediated signaling pathway	1.92E-04
22	GO:0009845: seed germination	2.70E-04
23	GO:0045727: positive regulation of translation	3.00E-04
24	GO:0006281: DNA repair	3.26E-04
25	GO:0009933: meristem structural organization	3.29E-04
26	GO:0006275: regulation of DNA replication	3.29E-04
27	GO:0016579: protein deubiquitination	4.28E-04
28	GO:0033044: regulation of chromosome organization	6.14E-04
29	GO:0009640: photomorphogenesis	7.13E-04
30	GO:0045132: meiotic chromosome segregation	7.95E-04
31	GO:0009913: epidermal cell differentiation	7.95E-04
32	GO:0009410: response to xenobiotic stimulus	7.95E-04
33	GO:0051276: chromosome organization	7.95E-04
34	GO:0000398: mRNA splicing, via spliceosome	8.61E-04
35	GO:0009934: regulation of meristem structural organization	9.93E-04
36	GO:0006325: chromatin organization	9.93E-04
37	GO:0007155: cell adhesion	9.93E-04
38	GO:0010228: vegetative to reproductive phase transition of meristem	1.02E-03
39	GO:0007018: microtubule-based movement	1.08E-03
40	GO:0000741: karyogamy	1.20E-03
41	GO:0010311: lateral root formation	1.20E-03
42	GO:0042138: meiotic DNA double-strand break formation	1.42E-03
43	GO:0090305: nucleic acid phosphodiester bond hydrolysis	1.42E-03
44	GO:0016572: histone phosphorylation	1.42E-03
45	GO:0006302: double-strand break repair	1.42E-03
46	GO:0048765: root hair cell differentiation	1.42E-03
47	GO:0008284: positive regulation of cell proliferation	1.65E-03
48	GO:0006259: DNA metabolic process	1.88E-03
49	GO:0016570: histone modification	1.88E-03
50	GO:0045010: actin nucleation	1.88E-03
51	GO:0010048: vernalization response	1.88E-03
52	GO:0006284: base-excision repair	1.88E-03
53	GO:0006312: mitotic recombination	1.88E-03
54	GO:0006260: DNA replication	2.01E-03
55	GO:0006974: cellular response to DNA damage stimulus	2.12E-03
56	GO:0010332: response to gamma radiation	2.37E-03
57	GO:0006487: protein N-linked glycosylation	2.63E-03
58	GO:0043687: post-translational protein modification	2.63E-03
59	GO:0006446: regulation of translational initiation	2.91E-03
60	GO:0007131: reciprocal meiotic recombination	2.91E-03
61	GO:0006606: protein import into nucleus	3.21E-03
62	GO:0001731: formation of translation preinitiation complex	3.21E-03
63	GO:0007062: sister chromatid cohesion	3.21E-03
64	GO:0016567: protein ubiquitination	3.48E-03
65	GO:0000724: double-strand break repair via homologous recombination	3.52E-03
66	GO:0042023: DNA endoreduplication	3.52E-03
67	GO:0010090: trichome morphogenesis	4.50E-03
68	GO:0000278: mitotic cell cycle	4.82E-03
69	GO:0048367: shoot system development	4.82E-03
70	GO:0000394: RNA splicing, via endonucleolytic cleavage and ligation	5.88E-03
71	GO:0006950: response to stress	6.13E-03
72	GO:0000165: MAPK cascade	6.25E-03
73	GO:0009560: embryo sac egg cell differentiation	6.64E-03
74	GO:0007049: cell cycle	7.03E-03
75	GO:0009793: embryo development ending in seed dormancy	7.70E-03
76	GO:0009086: methionine biosynthetic process	7.83E-03
77	GO:0051301: cell division	1.28E-02
78	GO:0048364: root development	1.48E-02
79	GO:0006396: RNA processing	1.86E-02
80	GO:0071555: cell wall organization	2.04E-02
81	GO:0006413: translational initiation	2.21E-02

Rank	GO Term	Adjusted P value
1	GO:0008409: 5'-3' exonuclease activity	0.00E+00
2	GO:0003690: double-stranded DNA binding	5.22E-05
3	GO:0004708: MAP kinase kinase activity	6.64E-05
4	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	6.64E-05
5	GO:0017108: 5'-flap endonuclease activity	6.64E-05
6	GO:0000150: recombinase activity	6.64E-05
7	GO:0032549: ribonucleoside binding	3.00E-04
8	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	6.14E-04
9	GO:0008026: ATP-dependent helicase activity	9.13E-04
10	GO:0003777: microtubule motor activity	1.08E-03
11	GO:0008094: DNA-dependent ATPase activity	1.20E-03
12	GO:0043022: ribosome binding	1.20E-03
13	GO:0008017: microtubule binding	1.79E-03
14	GO:0008237: metallopeptidase activity	1.88E-03
15	GO:0003684: damaged DNA binding	1.88E-03
16	GO:0004518: nuclease activity	1.88E-03
17	GO:0004386: helicase activity	2.09E-03
18	GO:0003697: single-stranded DNA binding	2.12E-03
19	GO:0004519: endonuclease activity	2.37E-03
20	GO:0004527: exonuclease activity	2.91E-03
21	GO:0005524: ATP binding	4.41E-03
22	GO:0004222: metalloendopeptidase activity	5.52E-03
23	GO:0004175: endopeptidase activity	5.52E-03
24	GO:0003676: nucleic acid binding	5.61E-03
25	GO:0017111: nucleoside-triphosphatase activity	6.28E-03
26	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	7.43E-03
27	GO:0003723: RNA binding	9.69E-03
28	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	1.33E-02
29	GO:0000166: nucleotide binding	1.63E-02
30	GO:0016788: hydrolase activity, acting on ester bonds	2.21E-02
31	GO:0003677: DNA binding	2.36E-02
32	GO:0003743: translation initiation factor activity	2.59E-02
33	GO:0000287: magnesium ion binding	3.76E-02

Rank	GO Term	Adjusted P value
1	GO:0000307: cyclin-dependent protein kinase holoenzyme complex	0.00E+00
2	GO:0005681: spliceosomal complex	5.22E-05
3	GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)	6.64E-05
4	GO:0008250: oligosaccharyltransferase complex	1.69E-04
5	GO:0005871: kinesin complex	1.02E-03
6	GO:0005874: microtubule	2.67E-03
7	GO:0005643: nuclear pore	2.91E-03
8	GO:0033290: eukaryotic 48S preinitiation complex	3.21E-03
9	GO:0016282: eukaryotic 43S preinitiation complex	3.21E-03
10	GO:0005852: eukaryotic translation initiation factor 3 complex	3.52E-03
11	GO:0005654: nucleoplasm	3.83E-03
12	GO:0005635: nuclear envelope	5.52E-03
13	GO:0005783: endoplasmic reticulum	7.41E-03
14	GO:0009524: phragmoplast	7.43E-03
15	GO:0005875: microtubule associated complex	8.25E-03
16	GO:0005789: endoplasmic reticulum membrane	2.33E-02
17	GO:0005829: cytosol	3.26E-02