co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G324297

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090391: granum assembly	0.00E+00
2	GO:0009658: chloroplast organization	5.20E-06
3	GO:0006353: DNA-templated transcription, termination	8.51E-06
4	GO:0006430: lysyl-tRNA aminoacylation	1.43E-04
5	GO:0051512: positive regulation of unidimensional cell growth	1.43E-04
6	GO:0010587: miRNA catabolic process	1.43E-04
7	GO:0009968: negative regulation of signal transduction	1.43E-04
8	GO:0015805: S-adenosyl-L-methionine transport	1.43E-04
9	GO:1901962: S-adenosyl-L-methionine transmembrane transport	1.43E-04
10	GO:0043157: response to cation stress	1.43E-04
11	GO:0018160: peptidyl-pyrromethane cofactor linkage	1.43E-04
12	GO:0080141: regulation of jasmonic acid biosynthetic process	1.43E-04
13	GO:0010380: regulation of chlorophyll biosynthetic process	3.52E-04
14	GO:1901671: positive regulation of superoxide dismutase activity	3.52E-04
15	GO:0051555: flavonol biosynthetic process	3.52E-04
16	GO:0000304: response to singlet oxygen	6.05E-04
17	GO:0030497: fatty acid elongation	6.05E-04
18	GO:0009247: glycolipid biosynthetic process	6.05E-04
19	GO:0010143: cutin biosynthetic process	6.05E-04
20	GO:0030259: lipid glycosylation	8.95E-04
21	GO:0006790: sulfur compound metabolic process	8.95E-04
22	GO:0045037: protein import into chloroplast stroma	8.95E-04
23	GO:0019375: galactolipid biosynthetic process	8.95E-04
24	GO:0006401: RNA catabolic process	8.95E-04
25	GO:0009098: leucine biosynthetic process	8.95E-04
26	GO:0006633: fatty acid biosynthetic process	9.52E-04
27	GO:0009735: response to cytokinin	1.11E-03
28	GO:0001676: long-chain fatty acid metabolic process	1.22E-03
29	GO:0010072: primary shoot apical meristem specification	1.22E-03
30	GO:0006081: cellular aldehyde metabolic process	1.22E-03
31	GO:0009813: flavonoid biosynthetic process	1.22E-03
32	GO:0033014: tetrapyrrole biosynthetic process	1.94E-03
33	GO:0010025: wax biosynthetic process	1.94E-03
34	GO:0019538: protein metabolic process	1.94E-03
35	GO:0006032: chitin catabolic process	1.94E-03
36	GO:0009082: branched-chain amino acid biosynthetic process	2.32E-03
37	GO:0009628: response to abiotic stimulus	2.32E-03
38	GO:0030244: cellulose biosynthetic process	2.45E-03
39	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	2.73E-03
40	GO:0016998: cell wall macromolecule catabolic process	4.70E-03
41	GO:0046854: phosphatidylinositol phosphorylation	4.70E-03
42	GO:0006655: phosphatidylglycerol biosynthetic process	5.23E-03
43	GO:0031408: oxylipin biosynthetic process	5.23E-03
44	GO:0042793: transcription from plastid promoter	5.23E-03
45	GO:0009416: response to light stimulus	5.24E-03
46	GO:0010027: thylakoid membrane organization	5.24E-03
47	GO:0034976: response to endoplasmic reticulum stress	6.38E-03
48	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	6.85E-03
49	GO:0007623: circadian rhythm	7.00E-03
50	GO:0080167: response to karrikin	7.35E-03
51	GO:0008610: lipid biosynthetic process	7.62E-03
52	GO:0044267: cellular protein metabolic process	7.62E-03
53	GO:0009627: systemic acquired resistance	8.26E-03
54	GO:0010103: stomatal complex morphogenesis	8.26E-03
55	GO:0035304: regulation of protein dephosphorylation	8.93E-03
56	GO:0009695: jasmonic acid biosynthetic process	9.61E-03
57	GO:0009620: response to fungus	9.61E-03
58	GO:0048367: shoot system development	9.61E-03
59	GO:0009738: abscisic acid-activated signaling pathway	1.03E-02
60	GO:0035556: intracellular signal transduction	1.10E-02
61	GO:0009902: chloroplast relocation	1.25E-02
62	GO:0009933: meristem structural organization	1.25E-02
63	GO:0000160: phosphorelay signal transduction system	1.33E-02
64	GO:0048573: photoperiodism, flowering	1.41E-02
65	GO:0009790: embryo development	1.65E-02
66	GO:0010114: response to red light	1.74E-02
67	GO:0006418: tRNA aminoacylation for protein translation	2.10E-02
68	GO:0009793: embryo development ending in seed dormancy	2.10E-02
69	GO:0015995: chlorophyll biosynthetic process	2.58E-02
70	GO:0048364: root development	2.99E-02
71	GO:0006457: protein folding	3.00E-02
72	GO:0010207: photosystem II assembly	3.32E-02
73	GO:0006952: defense response	3.54E-02
74	GO:0009753: response to jasmonic acid	3.54E-02
75	GO:0006508: proteolysis	3.64E-02
76	GO:0045893: positive regulation of transcription, DNA-templated	3.65E-02
77	GO:0071555: cell wall organization	4.12E-02

Rank	GO Term	Adjusted P value
1	GO:0045431: flavonol synthase activity	0.00E+00
2	GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity	0.00E+00
3	GO:0046577: long-chain-alcohol oxidase activity	0.00E+00
4	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	1.43E-04
5	GO:0035250: UDP-galactosyltransferase activity	1.43E-04
6	GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity	1.43E-04
7	GO:0031177: phosphopantetheine binding	1.43E-04
8	GO:0004467: long-chain fatty acid-CoA ligase activity	1.43E-04
9	GO:0008194: UDP-glycosyltransferase activity	1.43E-04
10	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	1.43E-04
11	GO:0004824: lysine-tRNA ligase activity	1.43E-04
12	GO:0003989: acetyl-CoA carboxylase activity	1.43E-04
13	GO:0004418: hydroxymethylbilane synthase activity	1.43E-04
14	GO:0003862: 3-isopropylmalate dehydrogenase activity	1.43E-04
15	GO:0031957: very long-chain fatty acid-CoA ligase activity	1.43E-04
16	GO:0016760: cellulose synthase (UDP-forming) activity	2.88E-04
17	GO:0019204: obsolete nucleotide phosphatase activity	3.52E-04
18	GO:0004075: biotin carboxylase activity	3.52E-04
19	GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity	8.95E-04
20	GO:0004568: chitinase activity	1.94E-03
21	GO:0046914: transition metal ion binding	3.68E-03
22	GO:0043531: ADP binding	4.18E-03
23	GO:0004252: serine-type endopeptidase activity	5.24E-03
24	GO:0000156: phosphorelay response regulator activity	5.80E-03
25	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	7.00E-03
26	GO:0019843: rRNA binding	1.18E-02
27	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	1.49E-02
28	GO:0004812: aminoacyl-tRNA ligase activity	2.29E-02
29	GO:0030246: carbohydrate binding	2.58E-02
30	GO:0016758: transferase activity, transferring hexosyl groups	2.58E-02
31	GO:0016757: transferase activity, transferring glycosyl groups	2.63E-02
32	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.99E-02
33	GO:0016746: transferase activity, transferring acyl groups	3.20E-02
34	GO:0008233: peptidase activity	3.34E-02
35	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	3.42E-02
36	GO:0051287: NAD binding	3.76E-02
37	GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	4.48E-02

Rank	GO Term	Adjusted P value
1	GO:0009941: chloroplast envelope	3.63E-08
2	GO:0009706: chloroplast inner membrane	3.22E-05
3	GO:0009532: plastid stroma	5.91E-05
4	GO:0009570: chloroplast stroma	2.67E-04
5	GO:0009507: chloroplast	5.17E-04
6	GO:0009840: chloroplastic endopeptidase Clp complex	1.22E-03
7	GO:0009536: plastid	7.72E-03
8	GO:0016020: membrane	1.10E-02
9	GO:0009535: chloroplast thylakoid membrane	1.52E-02
10	GO:0005737: cytoplasm	2.66E-02
11	GO:0005783: endoplasmic reticulum	2.68E-02
12	GO:0009579: thylakoid	3.17E-02