Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G312997

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0009657: plastid organization9.87E-06
2GO:0006364: rRNA processing1.61E-05
3GO:0009637: response to blue light4.28E-05
4GO:0010114: response to red light5.12E-05
5GO:0010218: response to far red light6.04E-05
6GO:0006744: ubiquinone biosynthetic process6.28E-05
7GO:0006537: glutamate biosynthetic process6.28E-05
8GO:0010207: photosystem II assembly1.49E-04
9GO:0009693: ethylene biosynthetic process1.83E-04
10GO:0019252: starch biosynthetic process2.30E-04
11GO:0006098: pentose-phosphate shunt2.93E-04
12GO:0015979: photosynthesis3.28E-04
13GO:0005978: glycogen biosynthetic process3.40E-04
14GO:0010264: myo-inositol hexakisphosphate biosynthetic process5.24E-04
15GO:0044262: cellular carbohydrate metabolic process6.59E-04
16GO:0006108: malate metabolic process6.59E-04
17GO:0009767: photosynthetic electron transport chain6.59E-04
18GO:0008299: isoprenoid biosynthetic process7.30E-04
19GO:0009058: biosynthetic process7.30E-04
20GO:0019684: photosynthesis, light reaction8.79E-04
21GO:0006807: nitrogen compound metabolic process1.12E-03
22GO:0009817: defense response to fungus, incompatible interaction1.21E-03
23GO:0009902: chloroplast relocation1.56E-03
24GO:0006520: cellular amino acid metabolic process1.56E-03
25GO:0016117: carotenoid biosynthetic process1.93E-03
26GO:0019761: glucosinolate biosynthetic process2.02E-03
27GO:0006099: tricarboxylic acid cycle2.12E-03
28GO:0000023: maltose metabolic process2.41E-03
29GO:0043085: positive regulation of catalytic activity3.43E-03
30GO:0010027: thylakoid membrane organization4.99E-03
31GO:0055114: oxidation-reduction process1.17E-02
32GO:0042742: defense response to bacterium1.81E-02
33GO:0009409: response to cold2.53E-02
34GO:0005975: carbohydrate metabolic process4.28E-02
RankGO TermAdjusted P value
1GO:0050347: trans-octaprenyltranstransferase activity0.00E+00
2GO:0046554: malate dehydrogenase (NADP+) activity0.00E+00
3GO:0045157: electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity1.23E-05
4GO:0015930: glutamate synthase activity1.23E-05
5GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity3.38E-05
6GO:0016638: oxidoreductase activity, acting on the CH-NH2 group of donors3.38E-05
7GO:0003959: NADPH dehydrogenase activity6.28E-05
8GO:0004324: ferredoxin-NADP+ reductase activity6.28E-05
9GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity9.79E-05
10GO:0008878: glucose-1-phosphate adenylyltransferase activity1.83E-04
11GO:0016765: transferase activity, transferring alkyl or aryl (other than methyl) groups2.32E-04
12GO:0016615: malate dehydrogenase activity2.32E-04
13GO:0030060: L-malate dehydrogenase activity2.85E-04
14GO:0008266: poly(U) RNA binding3.40E-04
15GO:0008483: transaminase activity1.65E-03
16GO:0003824: catalytic activity2.17E-03
17GO:0050661: NADP binding2.84E-03
18GO:0016779: nucleotidyltransferase activity3.93E-03
19GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor5.26E-03
20GO:0050660: flavin adenine dinucleotide binding6.13E-03
21GO:0016740: transferase activity6.17E-03
22GO:0016491: oxidoreductase activity6.62E-03
23GO:0030170: pyridoxal phosphate binding7.06E-03
24GO:0005506: iron ion binding2.18E-02
RankGO TermAdjusted P value
1GO:0009941: chloroplast envelope8.92E-08
2GO:0009570: chloroplast stroma4.00E-06
3GO:0009536: plastid1.05E-04
4GO:0048046: apoplast2.08E-04
5GO:0009535: chloroplast thylakoid membrane2.33E-04
6GO:0009507: chloroplast2.70E-04
7GO:0042651: thylakoid membrane6.59E-04
8GO:0009579: thylakoid1.43E-03
9GO:0010319: stromule2.12E-03
10GO:0031977: thylakoid lumen2.21E-03
11GO:0005783: endoplasmic reticulum4.07E-02