co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G304362

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032465: regulation of cytokinesis	0.00E+00
2	GO:0032776: DNA methylation on cytosine	0.00E+00
3	GO:0043137: DNA replication, removal of RNA primer	0.00E+00
4	GO:0006233: dTDP biosynthetic process	0.00E+00
5	GO:0071586: CAAX-box protein processing	0.00E+00
6	GO:0043987: histone H3-S10 phosphorylation	0.00E+00
7	GO:0080120: CAAX-box protein maturation	0.00E+00
8	GO:0031508: pericentric heterochromatin assembly	0.00E+00
9	GO:0006260: DNA replication	4.04E-10
10	GO:0007049: cell cycle	2.84E-08
11	GO:0016572: histone phosphorylation	1.06E-07
12	GO:0007018: microtubule-based movement	1.34E-05
13	GO:0006281: DNA repair	2.20E-05
14	GO:0010389: regulation of G2/M transition of mitotic cell cycle	3.82E-05
15	GO:0009966: regulation of signal transduction	1.21E-04
16	GO:0051301: cell division	1.55E-04
17	GO:0006275: regulation of DNA replication	3.55E-04
18	GO:0006342: chromatin silencing	3.80E-04
19	GO:0010425: DNA methylation on cytosine within a CNG sequence	3.97E-04
20	GO:0007059: chromosome segregation	3.97E-04
21	GO:0042276: error-prone translesion synthesis	3.97E-04
22	GO:1990426: mitotic recombination-dependent replication fork processing	3.97E-04
23	GO:0006259: DNA metabolic process	6.05E-04
24	GO:0045814: negative regulation of gene expression, epigenetic	9.31E-04
25	GO:0042547: cell wall modification involved in multidimensional cell growth	9.31E-04
26	GO:0010069: zygote asymmetric cytokinesis in embryo sac	9.31E-04
27	GO:0009956: radial pattern formation	9.31E-04
28	GO:0009186: deoxyribonucleoside diphosphate metabolic process	9.31E-04
29	GO:0009755: hormone-mediated signaling pathway	9.31E-04
30	GO:0018279: protein N-linked glycosylation via asparagine	9.31E-04
31	GO:0009294: DNA mediated transformation	1.22E-03
32	GO:0006333: chromatin assembly or disassembly	1.57E-03
33	GO:0007094: mitotic spindle assembly checkpoint	1.57E-03
34	GO:0022904: respiratory electron transport chain	1.57E-03
35	GO:0006310: DNA recombination	1.82E-03
36	GO:0090116: C-5 methylation of cytosine	2.28E-03
37	GO:0008356: asymmetric cell division	2.28E-03
38	GO:0006265: DNA topological change	3.07E-03
39	GO:0009909: regulation of flower development	3.55E-03
40	GO:0007267: cell-cell signaling	3.99E-03
41	GO:0009934: regulation of meristem structural organization	4.97E-03
42	GO:0006325: chromatin organization	4.97E-03
43	GO:0055072: iron ion homeostasis	4.97E-03
44	GO:0048366: leaf development	5.14E-03
45	GO:0051726: regulation of cell cycle	5.54E-03
46	GO:0048449: floral organ formation	6.02E-03
47	GO:0010074: maintenance of meristem identity	6.02E-03
48	GO:0030245: cellulose catabolic process	6.02E-03
49	GO:0090305: nucleic acid phosphodiester bond hydrolysis	7.15E-03
50	GO:0006302: double-strand break repair	7.15E-03
51	GO:0051567: histone H3-K9 methylation	7.31E-03
52	GO:0006306: DNA methylation	8.29E-03
53	GO:0009955: adaxial/abaxial pattern specification	8.34E-03
54	GO:0012501: programmed cell death	9.61E-03
55	GO:0009616: virus induced gene silencing	9.61E-03
56	GO:0016570: histone modification	9.61E-03
57	GO:0048453: sepal formation	9.61E-03
58	GO:0010048: vernalization response	9.61E-03
59	GO:0006284: base-excision repair	9.61E-03
60	GO:0008283: cell proliferation	1.05E-02
61	GO:0019915: lipid storage	1.09E-02
62	GO:0048451: petal formation	1.09E-02
63	GO:0006974: cellular response to DNA damage stimulus	1.09E-02
64	GO:0010228: vegetative to reproductive phase transition of meristem	1.10E-02
65	GO:0032508: DNA duplex unwinding	1.23E-02
66	GO:0016571: histone methylation	1.23E-02
67	GO:0010332: response to gamma radiation	1.23E-02
68	GO:0006487: protein N-linked glycosylation	1.38E-02
69	GO:0006406: mRNA export from nucleus	1.38E-02
70	GO:0010162: seed dormancy process	1.53E-02
71	GO:0006446: regulation of translational initiation	1.53E-02
72	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	1.53E-02
73	GO:0007062: sister chromatid cohesion	1.68E-02
74	GO:0016049: cell growth	1.68E-02
75	GO:0050826: response to freezing	1.68E-02
76	GO:0001731: formation of translation preinitiation complex	1.68E-02
77	GO:0000724: double-strand break repair via homologous recombination	1.85E-02
78	GO:0000902: cell morphogenesis	1.85E-02
79	GO:0010267: production of ta-siRNAs involved in RNA interference	2.01E-02
80	GO:0035196: production of miRNAs involved in gene silencing by miRNA	2.01E-02
81	GO:0010182: sugar mediated signaling pathway	2.37E-02
82	GO:0000278: mitotic cell cycle	2.55E-02
83	GO:0009845: seed germination	2.93E-02
84	GO:0009933: meristem structural organization	3.33E-02
85	GO:0006270: DNA replication initiation	3.54E-02
86	GO:0000226: microtubule cytoskeleton organization	3.54E-02
87	GO:0048193: Golgi vesicle transport	3.75E-02
88	GO:0016579: protein deubiquitination	3.97E-02

Rank	GO Term	Adjusted P value
1	GO:0004798: thymidylate kinase activity	0.00E+00
2	GO:0008409: 5'-3' exonuclease activity	0.00E+00
3	GO:0035175: histone kinase activity (H3-S10 specific)	0.00E+00
4	GO:0003777: microtubule motor activity	1.34E-05
5	GO:0008017: microtubule binding	4.69E-05
6	GO:0003916: DNA topoisomerase activity	3.97E-04
7	GO:0030337: DNA polymerase processivity factor activity	3.97E-04
8	GO:0008327: methyl-CpG binding	3.97E-04
9	GO:0019905: syntaxin binding	3.97E-04
10	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	3.97E-04
11	GO:0010428: methyl-CpNpG binding	3.97E-04
12	GO:0010429: methyl-CpNpN binding	3.97E-04
13	GO:0017108: 5'-flap endonuclease activity	3.97E-04
14	GO:0000150: recombinase activity	3.97E-04
15	GO:0008569: ATP-dependent microtubule motor activity, minus-end-directed	9.31E-04
16	GO:0003688: DNA replication origin binding	9.31E-04
17	GO:0004748: ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	1.57E-03
18	GO:0010385: double-stranded methylated DNA binding	1.57E-03
19	GO:0003886: DNA (cytosine-5-)-methyltransferase activity	2.28E-03
20	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	2.28E-03
21	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	3.07E-03
22	GO:0003713: transcription coactivator activity	3.99E-03
23	GO:0003677: DNA binding	4.72E-03
24	GO:0008810: cellulase activity	4.97E-03
25	GO:0008094: DNA-dependent ATPase activity	6.02E-03
26	GO:0043022: ribosome binding	6.02E-03
27	GO:0008237: metallopeptidase activity	9.61E-03
28	GO:0003684: damaged DNA binding	9.61E-03
29	GO:0046914: transition metal ion binding	9.61E-03
30	GO:0004518: nuclease activity	9.61E-03
31	GO:0003678: DNA helicase activity	9.61E-03
32	GO:0003697: single-stranded DNA binding	1.09E-02
33	GO:0003690: double-stranded DNA binding	1.09E-02
34	GO:0004519: endonuclease activity	1.23E-02
35	GO:0004527: exonuclease activity	1.53E-02
36	GO:0016651: oxidoreductase activity, acting on NAD(P)H	1.68E-02
37	GO:0019901: protein kinase binding	1.68E-02
38	GO:0005524: ATP binding	1.76E-02
39	GO:0042393: histone binding	2.74E-02
40	GO:0004222: metalloendopeptidase activity	2.93E-02
41	GO:0004175: endopeptidase activity	2.93E-02
42	GO:0003682: chromatin binding	4.47E-02

Rank	GO Term	Adjusted P value
1	GO:0000307: cyclin-dependent protein kinase holoenzyme complex	0.00E+00
2	GO:0005871: kinesin complex	1.17E-05
3	GO:0005819: spindle	2.03E-04
4	GO:0010369: chromocenter	3.97E-04
5	GO:0043626: PCNA complex	3.97E-04
6	GO:0005634: nucleus	4.34E-04
7	GO:0005875: microtubule associated complex	6.18E-04
8	GO:0005874: microtubule	9.28E-04
9	GO:0008250: oligosaccharyltransferase complex	9.31E-04
10	GO:0005971: ribonucleoside-diphosphate reductase complex	1.57E-03
11	GO:0000808: origin recognition complex	1.57E-03
12	GO:0000775: chromosome, centromeric region	1.57E-03
13	GO:0005654: nucleoplasm	1.82E-03
14	GO:0000776: kinetochore	2.28E-03
15	GO:0005744: mitochondrial inner membrane presequence translocase complex	6.02E-03
16	GO:0042555: MCM complex	7.15E-03
17	GO:0005730: nucleolus	1.02E-02
18	GO:0005743: mitochondrial inner membrane	1.23E-02
19	GO:0033290: eukaryotic 48S preinitiation complex	1.68E-02
20	GO:0016282: eukaryotic 43S preinitiation complex	1.68E-02
21	GO:0005852: eukaryotic translation initiation factor 3 complex	1.85E-02
22	GO:0031966: mitochondrial membrane	2.01E-02
23	GO:0005635: nuclear envelope	2.93E-02
24	GO:0009524: phragmoplast	3.97E-02