co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G303157

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010165: response to X-ray	0.00E+00
2	GO:0032465: regulation of cytokinesis	0.00E+00
3	GO:0043137: DNA replication, removal of RNA primer	0.00E+00
4	GO:0006233: dTDP biosynthetic process	0.00E+00
5	GO:0045694: regulation of embryo sac egg cell differentiation	0.00E+00
6	GO:0006260: DNA replication	1.58E-07
7	GO:0007049: cell cycle	2.23E-05
8	GO:0010389: regulation of G2/M transition of mitotic cell cycle	3.14E-05
9	GO:0007018: microtubule-based movement	1.53E-04
10	GO:0006281: DNA repair	1.65E-04
11	GO:0010074: maintenance of meristem identity	2.53E-04
12	GO:0006275: regulation of DNA replication	3.01E-04
13	GO:0006342: chromatin silencing	3.36E-04
14	GO:0016572: histone phosphorylation	3.36E-04
15	GO:0006302: double-strand break repair	3.36E-04
16	GO:0043157: response to cation stress	3.66E-04
17	GO:0080141: regulation of jasmonic acid biosynthetic process	3.66E-04
18	GO:0010425: DNA methylation on cytosine within a CNG sequence	3.66E-04
19	GO:0007059: chromosome segregation	3.66E-04
20	GO:0051512: positive regulation of unidimensional cell growth	3.66E-04
21	GO:0010587: miRNA catabolic process	3.66E-04
22	GO:0009968: negative regulation of signal transduction	3.66E-04
23	GO:0042276: error-prone translesion synthesis	3.66E-04
24	GO:1990426: mitotic recombination-dependent replication fork processing	3.66E-04
25	GO:0009909: regulation of flower development	4.39E-04
26	GO:0006259: DNA metabolic process	5.35E-04
27	GO:0019915: lipid storage	6.53E-04
28	GO:0016571: histone methylation	7.85E-04
29	GO:0018279: protein N-linked glycosylation via asparagine	8.59E-04
30	GO:0045814: negative regulation of gene expression, epigenetic	8.59E-04
31	GO:0042547: cell wall modification involved in multidimensional cell growth	8.59E-04
32	GO:0010069: zygote asymmetric cytokinesis in embryo sac	8.59E-04
33	GO:0009956: radial pattern formation	8.59E-04
34	GO:0009755: hormone-mediated signaling pathway	8.59E-04
35	GO:0043987: histone H3-S10 phosphorylation	8.59E-04
36	GO:0006406: mRNA export from nucleus	9.30E-04
37	GO:0010162: seed dormancy process	1.09E-03
38	GO:0051301: cell division	1.24E-03
39	GO:0050826: response to freezing	1.25E-03
40	GO:0007062: sister chromatid cohesion	1.25E-03
41	GO:0000724: double-strand break repair via homologous recombination	1.43E-03
42	GO:0007094: mitotic spindle assembly checkpoint	1.45E-03
43	GO:0022904: respiratory electron transport chain	1.45E-03
44	GO:0010182: sugar mediated signaling pathway	2.03E-03
45	GO:0006401: RNA catabolic process	2.11E-03
46	GO:0090116: C-5 methylation of cytosine	2.11E-03
47	GO:0008654: phospholipid biosynthetic process	2.11E-03
48	GO:0008356: asymmetric cell division	2.11E-03
49	GO:0006790: sulfur compound metabolic process	2.11E-03
50	GO:0009845: seed germination	2.73E-03
51	GO:0032875: regulation of DNA endoreduplication	2.83E-03
52	GO:0006265: DNA topological change	2.83E-03
53	GO:0009933: meristem structural organization	3.28E-03
54	GO:0051276: chromosome organization	3.68E-03
55	GO:0007267: cell-cell signaling	3.68E-03
56	GO:0010087: phloem or xylem histogenesis	3.68E-03
57	GO:0016579: protein deubiquitination	4.24E-03
58	GO:0055072: iron ion homeostasis	4.59E-03
59	GO:0009934: regulation of meristem structural organization	4.59E-03
60	GO:0009628: response to abiotic stimulus	5.55E-03
61	GO:0048449: floral organ formation	5.55E-03
62	GO:0000741: karyogamy	5.55E-03
63	GO:0030245: cellulose catabolic process	5.55E-03
64	GO:0051567: histone H3-K9 methylation	6.49E-03
65	GO:0090305: nucleic acid phosphodiester bond hydrolysis	6.59E-03
66	GO:0009640: photomorphogenesis	6.92E-03
67	GO:0006306: DNA methylation	7.37E-03
68	GO:0000398: mRNA splicing, via spliceosome	8.30E-03
69	GO:0006312: mitotic recombination	8.85E-03
70	GO:0009616: virus induced gene silencing	8.85E-03
71	GO:0016570: histone modification	8.85E-03
72	GO:0048453: sepal formation	8.85E-03
73	GO:0010048: vernalization response	8.85E-03
74	GO:0006284: base-excision repair	8.85E-03
75	GO:0010228: vegetative to reproductive phase transition of meristem	9.83E-03
76	GO:0048451: petal formation	1.01E-02
77	GO:0006974: cellular response to DNA damage stimulus	1.01E-02
78	GO:0010332: response to gamma radiation	1.13E-02
79	GO:0046854: phosphatidylinositol phosphorylation	1.13E-02
80	GO:0006487: protein N-linked glycosylation	1.27E-02
81	GO:0009607: response to biotic stimulus	1.27E-02
82	GO:0009294: DNA mediated transformation	1.41E-02
83	GO:0006446: regulation of translational initiation	1.41E-02
84	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	1.41E-02
85	GO:0045893: positive regulation of transcription, DNA-templated	1.52E-02
86	GO:0016049: cell growth	1.55E-02
87	GO:0001731: formation of translation preinitiation complex	1.55E-02
88	GO:0009630: gravitropism	1.55E-02
89	GO:0000902: cell morphogenesis	1.70E-02
90	GO:0009966: regulation of signal transduction	1.85E-02
91	GO:0010267: production of ta-siRNAs involved in RNA interference	1.85E-02
92	GO:0006310: DNA recombination	1.85E-02
93	GO:0035196: production of miRNAs involved in gene silencing by miRNA	1.85E-02
94	GO:0008219: cell death	1.85E-02
95	GO:0000278: mitotic cell cycle	2.34E-02
96	GO:0006623: protein targeting to vacuole	2.52E-02
97	GO:0009738: abscisic acid-activated signaling pathway	2.52E-02
98	GO:0009560: embryo sac egg cell differentiation	3.25E-02
99	GO:0000226: microtubule cytoskeleton organization	3.25E-02
100	GO:0016567: protein ubiquitination	3.40E-02
101	GO:0048573: photoperiodism, flowering	3.45E-02
102	GO:0048193: Golgi vesicle transport	3.45E-02
103	GO:0048366: leaf development	3.85E-02
104	GO:0051726: regulation of cell cycle	4.06E-02

Rank	GO Term	Adjusted P value
1	GO:0004798: thymidylate kinase activity	0.00E+00
2	GO:0003881: CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity	0.00E+00
3	GO:0008409: 5'-3' exonuclease activity	0.00E+00
4	GO:0008017: microtubule binding	3.54E-05
5	GO:0003777: microtubule motor activity	1.53E-04
6	GO:0017108: 5'-flap endonuclease activity	3.66E-04
7	GO:0000150: recombinase activity	3.66E-04
8	GO:0003916: DNA topoisomerase activity	3.66E-04
9	GO:0030337: DNA polymerase processivity factor activity	3.66E-04
10	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	3.66E-04
11	GO:0019905: syntaxin binding	3.66E-04
12	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	3.66E-04
13	GO:0019204: obsolete nucleotide phosphatase activity	8.59E-04
14	GO:0008569: ATP-dependent microtubule motor activity, minus-end-directed	8.59E-04
15	GO:0035175: histone kinase activity (H3-S10 specific)	8.59E-04
16	GO:0004748: ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	1.45E-03
17	GO:0016780: phosphotransferase activity, for other substituted phosphate groups	1.45E-03
18	GO:0003886: DNA (cytosine-5-)-methyltransferase activity	2.11E-03
19	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	2.11E-03
20	GO:0005524: ATP binding	2.57E-03
21	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	2.83E-03
22	GO:0008810: cellulase activity	4.59E-03
23	GO:0043022: ribosome binding	5.55E-03
24	GO:0008094: DNA-dependent ATPase activity	5.55E-03
25	GO:0008026: ATP-dependent helicase activity	8.80E-03
26	GO:0003684: damaged DNA binding	8.85E-03
27	GO:0004518: nuclease activity	8.85E-03
28	GO:0003690: double-stranded DNA binding	1.01E-02
29	GO:0003697: single-stranded DNA binding	1.01E-02
30	GO:0004519: endonuclease activity	1.13E-02
31	GO:0004527: exonuclease activity	1.41E-02
32	GO:0016651: oxidoreductase activity, acting on NAD(P)H	1.55E-02
33	GO:0019901: protein kinase binding	1.55E-02
34	GO:0003677: DNA binding	1.64E-02
35	GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	1.85E-02
36	GO:0004386: helicase activity	2.03E-02

Rank	GO Term	Adjusted P value
1	GO:0000307: cyclin-dependent protein kinase holoenzyme complex	0.00E+00
2	GO:0005871: kinesin complex	1.38E-04
3	GO:0043626: PCNA complex	3.66E-04
4	GO:0005875: microtubule associated complex	5.28E-04
5	GO:0005874: microtubule	7.64E-04
6	GO:0008250: oligosaccharyltransferase complex	8.59E-04
7	GO:0005971: ribonucleoside-diphosphate reductase complex	1.45E-03
8	GO:0000808: origin recognition complex	1.45E-03
9	GO:0000775: chromosome, centromeric region	1.45E-03
10	GO:0005654: nucleoplasm	1.62E-03
11	GO:0030915: Smc5-Smc6 complex	2.11E-03
12	GO:0000776: kinetochore	2.11E-03
13	GO:0005732: small nucleolar ribonucleoprotein complex	2.83E-03
14	GO:0005744: mitochondrial inner membrane presequence translocase complex	5.55E-03
15	GO:0005694: chromosome	8.22E-03
16	GO:0005681: spliceosomal complex	1.01E-02
17	GO:0005743: mitochondrial inner membrane	1.09E-02
18	GO:0005634: nucleus	1.16E-02
19	GO:0033290: eukaryotic 48S preinitiation complex	1.55E-02
20	GO:0016282: eukaryotic 43S preinitiation complex	1.55E-02
21	GO:0005852: eukaryotic translation initiation factor 3 complex	1.70E-02
22	GO:0031966: mitochondrial membrane	1.85E-02
23	GO:0005819: spindle	2.34E-02
24	GO:0005635: nuclear envelope	2.69E-02
25	GO:0009524: phragmoplast	3.65E-02