Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G302639

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010269: response to selenium ion0.00E+00
2GO:0018283: iron incorporation into metallo-sulfur cluster0.00E+00
3GO:0042549: photosystem II stabilization0.00E+00
4GO:0010266: response to vitamin B10.00E+00
5GO:0035970: peptidyl-threonine dephosphorylation0.00E+00
6GO:0015979: photosynthesis2.63E-16
7GO:0009773: photosynthetic electron transport in photosystem I1.66E-10
8GO:0009765: photosynthesis, light harvesting5.00E-10
9GO:0018298: protein-chromophore linkage7.39E-09
10GO:0010196: nonphotochemical quenching5.23E-08
11GO:0043085: positive regulation of catalytic activity1.51E-06
12GO:0010207: photosystem II assembly2.53E-06
13GO:0009637: response to blue light5.95E-06
14GO:0019344: cysteine biosynthetic process5.95E-06
15GO:0010114: response to red light8.18E-06
16GO:0010218: response to far red light1.10E-05
17GO:0035304: regulation of protein dephosphorylation4.24E-05
18GO:0006364: rRNA processing4.67E-05
19GO:0010205: photoinhibition7.36E-05
20GO:0010027: thylakoid membrane organization1.06E-04
21GO:0016117: carotenoid biosynthetic process1.54E-04
22GO:0006098: pentose-phosphate shunt1.74E-04
23GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway1.74E-04
24GO:0071482: cellular response to light stimulus2.06E-04
25GO:0006878: cellular copper ion homeostasis2.06E-04
26GO:0001887: selenium compound metabolic process2.06E-04
27GO:0006534: cysteine metabolic process2.06E-04
28GO:0016045: detection of bacterium2.06E-04
29GO:0000023: maltose metabolic process2.59E-04
30GO:0015995: chlorophyll biosynthetic process4.29E-04
31GO:0006636: unsaturated fatty acid biosynthetic process4.79E-04
32GO:0009228: thiamine biosynthetic process4.95E-04
33GO:0010236: plastoquinone biosynthetic process4.95E-04
34GO:0009657: plastid organization6.39E-04
35GO:0010155: regulation of proton transport7.28E-04
36GO:0019760: glucosinolate metabolic process8.44E-04
37GO:0006733: oxidoreduction coenzyme metabolic process8.44E-04
38GO:0005986: sucrose biosynthetic process8.44E-04
39GO:0019252: starch biosynthetic process1.17E-03
40GO:0009595: detection of biotic stimulus1.25E-03
41GO:0009117: nucleotide metabolic process1.25E-03
42GO:0019216: regulation of lipid metabolic process1.25E-03
43GO:0006790: sulfur compound metabolic process1.25E-03
44GO:0009902: chloroplast relocation1.52E-03
45GO:0043900: regulation of multi-organism process1.69E-03
46GO:0019748: secondary metabolic process1.69E-03
47GO:0006526: arginine biosynthetic process1.69E-03
48GO:0009772: photosynthetic electron transport in photosystem II1.69E-03
49GO:0080167: response to karrikin1.71E-03
50GO:0006662: glycerol ether metabolic process1.94E-03
51GO:0006561: proline biosynthetic process2.15E-03
52GO:0019761: glucosinolate biosynthetic process2.24E-03
53GO:0042742: defense response to bacterium2.35E-03
54GO:0055072: iron ion homeostasis2.65E-03
55GO:0006766: vitamin metabolic process2.65E-03
56GO:0009108: coenzyme biosynthetic process2.65E-03
57GO:0010206: photosystem II repair2.65E-03
58GO:0034660: ncRNA metabolic process2.65E-03
59GO:0006801: superoxide metabolic process2.65E-03
60GO:0009106: lipoate metabolic process2.65E-03
61GO:0010310: regulation of hydrogen peroxide metabolic process3.21E-03
62GO:0009744: response to sucrose3.54E-03
63GO:0009072: aromatic amino acid family metabolic process3.82E-03
64GO:0000302: response to reactive oxygen species4.46E-03
65GO:0009697: salicylic acid biosynthetic process5.11E-03
66GO:0010039: response to iron ion5.81E-03
67GO:0010264: myo-inositol hexakisphosphate biosynthetic process5.81E-03
68GO:0006546: glycine catabolic process5.81E-03
69GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway5.81E-03
70GO:0042631: cellular response to water deprivation6.54E-03
71GO:0009607: response to biotic stimulus7.31E-03
72GO:0031408: oxylipin biosynthetic process7.31E-03
73GO:0006094: gluconeogenesis9.77E-03
74GO:0019684: photosynthesis, light reaction9.77E-03
75GO:0009749: response to glucose9.77E-03
76GO:0008219: cell death1.06E-02
77GO:0006612: protein targeting to membrane1.15E-02
78GO:0010200: response to chitin1.15E-02
79GO:0010363: regulation of plant-type hypersensitive response1.25E-02
80GO:0046777: protein autophosphorylation1.25E-02
81GO:0009867: jasmonic acid mediated signaling pathway1.34E-02
82GO:0031348: negative regulation of defense response1.34E-02
83GO:0009695: jasmonic acid biosynthetic process1.34E-02
84GO:0045454: cell redox homeostasis1.64E-02
85GO:0006096: glycolytic process1.69E-02
86GO:0000165: MAPK cascade1.75E-02
87GO:0030163: protein catabolic process1.86E-02
88GO:0009073: aromatic amino acid family biosynthetic process2.09E-02
89GO:0009409: response to cold2.14E-02
90GO:0009658: chloroplast organization2.94E-02
91GO:0016311: dephosphorylation3.08E-02
92GO:0008652: cellular amino acid biosynthetic process3.62E-02
93GO:0009624: response to nematode3.62E-02
94GO:0009644: response to high light intensity3.76E-02
95GO:0022900: electron transport chain3.91E-02
96GO:0030001: metal ion transport3.91E-02
97GO:0006952: defense response4.97E-02
RankGO TermAdjusted P value
1GO:0016532: superoxide dismutase copper chaperone activity0.00E+00
2GO:0010355: homogentisate farnesyltransferase activity0.00E+00
3GO:0080041: ADP-ribose pyrophosphohydrolase activity0.00E+00
4GO:0009000: selenocysteine lyase activity0.00E+00
5GO:0010357: homogentisate solanesyltransferase activity0.00E+00
6GO:0009496: plastoquinol--plastocyanin reductase activity0.00E+00
7GO:0010242: oxygen evolving activity0.00E+00
8GO:0003991: acetylglutamate kinase activity0.00E+00
9GO:0010356: homogentisate geranylgeranyltransferase activity0.00E+00
10GO:0016168: chlorophyll binding7.39E-09
11GO:0050307: sucrose-phosphate phosphatase activity2.06E-04
12GO:0004750: ribulose-phosphate 3-epimerase activity2.06E-04
13GO:0008974: phosphoribulokinase activity2.06E-04
14GO:0016679: oxidoreductase activity, acting on diphenols and related substances as donors2.06E-04
15GO:0031071: cysteine desulfurase activity2.06E-04
16GO:0004462: lactoylglutathione lyase activity4.95E-04
17GO:0004042: acetyl-CoA:L-glutamate N-acetyltransferase activity4.95E-04
18GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity4.95E-04
19GO:0004349: glutamate 5-kinase activity4.95E-04
20GO:0004659: prenyltransferase activity1.25E-03
21GO:0004332: fructose-bisphosphate aldolase activity1.25E-03
22GO:0016857: racemase and epimerase activity, acting on carbohydrates and derivatives1.69E-03
23GO:0008121: ubiquinol-cytochrome-c reductase activity2.65E-03
24GO:0004784: superoxide dismutase activity3.21E-03
25GO:0008047: enzyme activator activity3.21E-03
26GO:0008266: poly(U) RNA binding3.82E-03
27GO:0003993: acid phosphatase activity6.54E-03
28GO:0015035: protein disulfide oxidoreductase activity6.59E-03
29GO:0051536: iron-sulfur cluster binding7.52E-03
30GO:0008080: N-acetyltransferase activity9.77E-03
31GO:0046872: metal ion binding1.30E-02
32GO:0051537: 2 iron, 2 sulfur cluster binding1.34E-02
33GO:0004222: metalloendopeptidase activity1.54E-02
34GO:0016829: lyase activity2.22E-02
35GO:0016853: isomerase activity2.22E-02
36GO:0016791: phosphatase activity2.94E-02
37GO:0005516: calmodulin binding3.08E-02
RankGO TermAdjusted P value
1GO:0009279: cell outer membrane0.00E+00
2GO:0009783: photosystem II antenna complex0.00E+00
3GO:0009579: thylakoid5.79E-22
4GO:0009507: chloroplast3.88E-16
5GO:0010287: plastoglobule2.28E-15
6GO:0009535: chloroplast thylakoid membrane9.97E-15
7GO:0009522: photosystem I1.07E-14
8GO:0009941: chloroplast envelope3.39E-10
9GO:0009523: photosystem II1.59E-09
10GO:0009538: photosystem I reaction center5.23E-08
11GO:0009534: chloroplast thylakoid9.89E-07
12GO:0031977: thylakoid lumen9.50E-06
13GO:0009570: chloroplast stroma3.69E-05
14GO:0019898: extrinsic component of membrane4.88E-05
15GO:0009654: photosystem II oxygen evolving complex7.36E-05
16GO:0030093: chloroplast photosystem I2.06E-04
17GO:0009517: PSII associated light-harvesting complex II2.06E-04
18GO:0042651: thylakoid membrane4.09E-04
19GO:0009543: chloroplast thylakoid lumen4.09E-04
20GO:0009533: chloroplast stromal thylakoid4.95E-04
21GO:0009508: plastid chromosome1.69E-03
22GO:0010319: stromule2.39E-03
23GO:0016020: membrane4.54E-03
24GO:0009295: nucleoid5.81E-03
25GO:0048046: apoplast6.01E-03
26GO:0016021: integral component of membrane1.34E-02