Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G180021

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0048359: mucilage metabolic process involved in seed coat development1.25E-06
2GO:0010389: regulation of G2/M transition of mitotic cell cycle5.24E-06
3GO:0009968: negative regulation of signal transduction1.67E-04
4GO:0080001: mucilage extrusion from seed coat1.67E-04
5GO:0097502: mannosylation1.67E-04
6GO:0043157: response to cation stress1.67E-04
7GO:0080141: regulation of jasmonic acid biosynthetic process1.67E-04
8GO:0040020: regulation of meiotic nuclear division1.67E-04
9GO:0051512: positive regulation of unidimensional cell growth1.67E-04
10GO:0010587: miRNA catabolic process1.67E-04
11GO:0007018: microtubule-based movement3.40E-04
12GO:0010192: mucilage biosynthetic process4.07E-04
13GO:0009943: adaxial/abaxial axis specification4.07E-04
14GO:0009755: hormone-mediated signaling pathway4.07E-04
15GO:0009957: epidermal cell fate specification6.97E-04
16GO:0080060: integument development6.97E-04
17GO:0009909: regulation of flower development7.65E-04
18GO:0008654: phospholipid biosynthetic process1.04E-03
19GO:0006790: sulfur compound metabolic process1.04E-03
20GO:0035434: copper ion transmembrane transport1.04E-03
21GO:0006401: RNA catabolic process1.04E-03
22GO:0010214: seed coat development1.04E-03
23GO:0006275: regulation of DNA replication1.15E-03
24GO:0010072: primary shoot apical meristem specification1.40E-03
25GO:0006825: copper ion transport1.40E-03
26GO:0048229: gametophyte development1.80E-03
27GO:0009880: embryonic pattern specification1.80E-03
28GO:0000911: cytokinesis by cell plate formation2.10E-03
29GO:0043086: negative regulation of catalytic activity2.10E-03
30GO:0009934: regulation of meristem structural organization2.21E-03
31GO:0009944: polarity specification of adaxial/abaxial axis2.21E-03
32GO:0010583: response to cyclopentenone2.21E-03
33GO:0009628: response to abiotic stimulus2.66E-03
34GO:0048449: floral organ formation2.66E-03
35GO:0010074: maintenance of meristem identity2.66E-03
36GO:0016572: histone phosphorylation3.15E-03
37GO:0051301: cell division3.18E-03
38GO:0008284: positive regulation of cell proliferation3.68E-03
39GO:0009955: adaxial/abaxial pattern specification3.68E-03
40GO:0010048: vernalization response4.24E-03
41GO:0016570: histone modification4.24E-03
42GO:0051225: spindle assembly4.81E-03
43GO:0019915: lipid storage4.81E-03
44GO:0016571: histone methylation5.40E-03
45GO:0046854: phosphatidylinositol phosphorylation5.40E-03
46GO:0031048: chromatin silencing by small RNA6.03E-03
47GO:0006406: mRNA export from nucleus6.03E-03
48GO:0006289: nucleotide-excision repair6.03E-03
49GO:0010162: seed dormancy process6.69E-03
50GO:0009855: determination of bilateral symmetry6.69E-03
51GO:0010014: meristem initiation6.69E-03
52GO:0006260: DNA replication6.72E-03
53GO:0016049: cell growth7.37E-03
54GO:0050826: response to freezing7.37E-03
55GO:0000902: cell morphogenesis8.06E-03
56GO:0042023: DNA endoreduplication8.06E-03
57GO:0006310: DNA recombination8.79E-03
58GO:0000910: cytokinesis8.79E-03
59GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process9.54E-03
60GO:0010182: sugar mediated signaling pathway1.03E-02
61GO:0006346: methylation-dependent chromatin silencing1.11E-02
62GO:0006281: DNA repair1.17E-02
63GO:0009738: abscisic acid-activated signaling pathway1.19E-02
64GO:0009845: seed germination1.27E-02
65GO:0009933: meristem structural organization1.44E-02
66GO:0048193: Golgi vesicle transport1.62E-02
67GO:0007049: cell cycle1.62E-02
68GO:0048573: photoperiodism, flowering1.62E-02
69GO:0016579: protein deubiquitination1.72E-02
70GO:0051567: histone H3-K9 methylation2.32E-02
71GO:0009640: photomorphogenesis2.42E-02
72GO:0009793: embryo development ending in seed dormancy2.58E-02
73GO:0006812: cation transport2.98E-02
74GO:0010228: vegetative to reproductive phase transition of meristem3.10E-02
75GO:0009555: pollen development3.83E-02
76GO:0045893: positive regulation of transcription, DNA-templated4.22E-02
77GO:0044237: cellular metabolic process4.35E-02
78GO:0009416: response to light stimulus4.89E-02
RankGO TermAdjusted P value
1GO:0008353: RNA polymerase II carboxy-terminal domain kinase activity0.00E+00
2GO:0051753: mannan synthase activity0.00E+00
3GO:0004693: cyclin-dependent protein serine/threonine kinase activity0.00E+00
4GO:0047259: glucomannan 4-beta-mannosyltransferase activity0.00E+00
5GO:0003881: CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity0.00E+00
6GO:0019905: syntaxin binding1.67E-04
7GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity1.67E-04
8GO:0003777: microtubule motor activity3.40E-04
9GO:0019204: obsolete nucleotide phosphatase activity4.07E-04
10GO:0016780: phosphotransferase activity, for other substituted phosphate groups6.97E-04
11GO:0070628: proteasome binding6.97E-04
12GO:0005375: copper ion transmembrane transporter activity1.04E-03
13GO:0042802: identical protein binding1.26E-03
14GO:0008236: serine-type peptidase activity1.60E-03
15GO:0043130: ubiquitin binding2.66E-03
16GO:0003684: damaged DNA binding4.24E-03
17GO:0008017: microtubule binding5.94E-03
18GO:0004252: serine-type endopeptidase activity6.45E-03
19GO:0019829: cation-transporting ATPase activity8.79E-03
20GO:0008289: lipid binding2.11E-02
21GO:0008026: ATP-dependent helicase activity2.87E-02
22GO:0004721: phosphoprotein phosphatase activity3.70E-02
23GO:0008233: peptidase activity4.09E-02
RankGO TermAdjusted P value
1GO:0000307: cyclin-dependent protein kinase holoenzyme complex0.00E+00
2GO:0005871: kinesin complex3.15E-04
3GO:0010005: cortical microtubule, transverse to long axis1.80E-03
4GO:0005576: extracellular region4.97E-03
5GO:0005874: microtubule9.02E-03
6GO:0005635: nuclear envelope1.27E-02
7GO:0005875: microtubule associated complex1.91E-02