co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G178005

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042276: error-prone translesion synthesis	0.00E+00
2	GO:0031508: pericentric heterochromatin assembly	0.00E+00
3	GO:0006268: DNA unwinding involved in DNA replication	0.00E+00
4	GO:0032776: DNA methylation on cytosine	0.00E+00
5	GO:0006260: DNA replication	6.18E-19
6	GO:0032508: DNA duplex unwinding	4.10E-11
7	GO:0006270: DNA replication initiation	1.63E-10
8	GO:0007049: cell cycle	2.26E-10
9	GO:0051301: cell division	6.12E-09
10	GO:0006275: regulation of DNA replication	3.19E-07
11	GO:0051726: regulation of cell cycle	9.57E-07
12	GO:0043987: histone H3-S10 phosphorylation	4.09E-06
13	GO:0016572: histone phosphorylation	5.81E-06
14	GO:0006259: DNA metabolic process	1.28E-05
15	GO:0010389: regulation of G2/M transition of mitotic cell cycle	2.44E-05
16	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	4.16E-05
17	GO:0006265: DNA topological change	6.37E-05
18	GO:0006084: acetyl-CoA metabolic process	1.52E-04
19	GO:0006342: chromatin silencing	2.84E-04
20	GO:1990426: mitotic recombination-dependent replication fork processing	3.27E-04
21	GO:0009652: thigmotropism	3.27E-04
22	GO:0010425: DNA methylation on cytosine within a CNG sequence	3.27E-04
23	GO:0000911: cytokinesis by cell plate formation	5.69E-04
24	GO:0051567: histone H3-K9 methylation	6.23E-04
25	GO:0010332: response to gamma radiation	6.67E-04
26	GO:0006306: DNA methylation	7.39E-04
27	GO:0010069: zygote asymmetric cytokinesis in embryo sac	7.69E-04
28	GO:0009186: deoxyribonucleoside diphosphate metabolic process	7.69E-04
29	GO:0009755: hormone-mediated signaling pathway	7.69E-04
30	GO:0045814: negative regulation of gene expression, epigenetic	7.69E-04
31	GO:0006281: DNA repair	9.06E-04
32	GO:0007018: microtubule-based movement	1.17E-03
33	GO:0009957: epidermal cell fate specification	1.31E-03
34	GO:0022904: respiratory electron transport chain	1.31E-03
35	GO:0001558: regulation of cell growth	1.31E-03
36	GO:0006310: DNA recombination	1.39E-03
37	GO:0009966: regulation of signal transduction	1.39E-03
38	GO:0090116: C-5 methylation of cytosine	1.91E-03
39	GO:0009909: regulation of flower development	2.48E-03
40	GO:0010082: regulation of root meristem growth	2.55E-03
41	GO:0006325: chromatin organization	4.12E-03
42	GO:0009934: regulation of meristem structural organization	4.12E-03
43	GO:0010583: response to cyclopentenone	4.12E-03
44	GO:0048449: floral organ formation	4.98E-03
45	GO:0006302: double-strand break repair	5.91E-03
46	GO:0061025: membrane fusion	5.91E-03
47	GO:0042127: regulation of cell proliferation	6.89E-03
48	GO:0048453: sepal formation	7.93E-03
49	GO:0012501: programmed cell death	7.93E-03
50	GO:0009958: positive gravitropism	7.93E-03
51	GO:0016570: histone modification	7.93E-03
52	GO:0008283: cell proliferation	7.95E-03
53	GO:0051225: spindle assembly	9.03E-03
54	GO:0048451: petal formation	9.03E-03
55	GO:0009165: nucleotide biosynthetic process	1.02E-02
56	GO:0048316: seed development	1.14E-02
57	GO:0009294: DNA mediated transformation	1.26E-02
58	GO:0016126: sterol biosynthetic process	1.52E-02
59	GO:0000724: double-strand break repair via homologous recombination	1.52E-02
60	GO:0051258: protein polymerization	2.10E-02
61	GO:0009553: embryo sac development	2.10E-02
62	GO:0007017: microtubule-based process	2.41E-02
63	GO:0031047: gene silencing by RNA	2.58E-02
64	GO:0000226: microtubule cytoskeleton organization	2.91E-02
65	GO:0009790: embryo development	3.63E-02

Rank	GO Term	Adjusted P value
1	GO:0003688: DNA replication origin binding	0.00E+00
2	GO:0030337: DNA polymerase processivity factor activity	0.00E+00
3	GO:0003678: DNA helicase activity	9.72E-12
4	GO:0035175: histone kinase activity (H3-S10 specific)	4.09E-06
5	GO:0004748: ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	1.49E-05
6	GO:0008017: microtubule binding	2.44E-05
7	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	3.44E-05
8	GO:0019901: protein kinase binding	5.26E-05
9	GO:0003677: DNA binding	7.29E-05
10	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	3.27E-04
11	GO:0010428: methyl-CpNpG binding	3.27E-04
12	GO:0010429: methyl-CpNpN binding	3.27E-04
13	GO:0000150: recombinase activity	3.27E-04
14	GO:0003916: DNA topoisomerase activity	3.27E-04
15	GO:0008327: methyl-CpG binding	3.27E-04
16	GO:0005524: ATP binding	5.37E-04
17	GO:0003777: microtubule motor activity	1.17E-03
18	GO:0010385: double-stranded methylated DNA binding	1.31E-03
19	GO:0003886: DNA (cytosine-5-)-methyltransferase activity	1.91E-03
20	GO:0008094: DNA-dependent ATPase activity	4.98E-03
21	GO:0046914: transition metal ion binding	7.93E-03
22	GO:0005484: SNAP receptor activity	7.93E-03
23	GO:0003684: damaged DNA binding	7.93E-03
24	GO:0003682: chromatin binding	7.99E-03
25	GO:0000166: nucleotide binding	8.95E-03
26	GO:0003697: single-stranded DNA binding	9.03E-03
27	GO:0003690: double-stranded DNA binding	9.03E-03
28	GO:0016651: oxidoreductase activity, acting on NAD(P)H	1.39E-02
29	GO:0005200: structural constituent of cytoskeleton	1.80E-02
30	GO:0042393: histone binding	2.25E-02
31	GO:0045735: nutrient reservoir activity	3.45E-02

Rank	GO Term	Adjusted P value
1	GO:0043626: PCNA complex	0.00E+00
2	GO:0033095: aleurone grain	0.00E+00
3	GO:0000307: cyclin-dependent protein kinase holoenzyme complex	0.00E+00
4	GO:0042555: MCM complex	1.52E-12
5	GO:0005971: ribonucleoside-diphosphate reductase complex	1.49E-05
6	GO:0005874: microtubule	6.55E-05
7	GO:0005634: nucleus	7.50E-05
8	GO:0005819: spindle	1.35E-04
9	GO:0010369: chromocenter	3.27E-04
10	GO:0000347: THO complex	3.27E-04
11	GO:0005871: kinesin complex	1.09E-03
12	GO:0005815: microtubule organizing center	1.31E-03
13	GO:0000808: origin recognition complex	1.31E-03
14	GO:0005876: spindle microtubule	1.91E-03
15	GO:0010005: cortical microtubule, transverse to long axis	3.29E-03
16	GO:0009574: preprophase band	3.29E-03
17	GO:0009524: phragmoplast	3.61E-03
18	GO:0012505: endomembrane system	4.12E-03
19	GO:0005875: microtubule associated complex	4.22E-03
20	GO:0009504: cell plate	1.52E-02
21	GO:0031966: mitochondrial membrane	1.66E-02
22	GO:0043234: protein complex	2.25E-02
23	GO:0005694: chromosome	3.47E-02
24	GO:0005730: nucleolus	4.54E-02