Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G175728

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0009773: photosynthetic electron transport in photosystem I3.94E-07
2GO:0010207: photosystem II assembly1.07E-05
3GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway2.97E-05
4GO:0009657: plastid organization3.03E-05
5GO:0010155: regulation of proton transport3.53E-05
6GO:0035304: regulation of protein dephosphorylation4.69E-05
7GO:0006364: rRNA processing7.33E-05
8GO:0009902: chloroplast relocation8.42E-05
9GO:0019344: cysteine biosynthetic process1.23E-04
10GO:0006733: oxidoreduction coenzyme metabolic process1.23E-04
11GO:0009637: response to blue light1.23E-04
12GO:0010114: response to red light1.45E-04
13GO:0010218: response to far red light1.69E-04
14GO:0019216: regulation of lipid metabolic process1.89E-04
15GO:0009595: detection of biotic stimulus1.89E-04
16GO:0009117: nucleotide metabolic process1.89E-04
17GO:0009744: response to sucrose2.26E-04
18GO:0070084: protein initiator methionine removal2.64E-04
19GO:0009772: photosynthetic electron transport in photosystem II2.64E-04
20GO:0043900: regulation of multi-organism process2.64E-04
21GO:0019748: secondary metabolic process2.64E-04
22GO:0015995: chlorophyll biosynthetic process2.72E-04
23GO:0006535: cysteine biosynthetic process from serine3.46E-04
24GO:0009108: coenzyme biosynthetic process4.33E-04
25GO:0034660: ncRNA metabolic process4.33E-04
26GO:0019538: protein metabolic process4.33E-04
27GO:0009106: lipoate metabolic process4.33E-04
28GO:0006766: vitamin metabolic process4.33E-04
29GO:0009987: cellular process4.33E-04
30GO:0010310: regulation of hydrogen peroxide metabolic process5.25E-04
31GO:0010027: thylakoid membrane organization5.70E-04
32GO:0048868: pollen tube development6.25E-04
33GO:0009072: aromatic amino acid family metabolic process6.25E-04
34GO:0006098: pentose-phosphate shunt7.50E-04
35GO:0009697: salicylic acid biosynthetic process8.41E-04
36GO:0006546: glycine catabolic process9.54E-04
37GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway9.54E-04
38GO:0031408: oxylipin biosynthetic process1.20E-03
39GO:0042793: transcription from plastid promoter1.20E-03
40GO:0006636: unsaturated fatty acid biosynthetic process1.32E-03
41GO:0009749: response to glucose1.59E-03
42GO:0006612: protein targeting to membrane1.86E-03
43GO:0010103: stomatal complex morphogenesis1.86E-03
44GO:0010200: response to chitin1.86E-03
45GO:0046777: protein autophosphorylation2.00E-03
46GO:0010363: regulation of plant-type hypersensitive response2.00E-03
47GO:0009867: jasmonic acid mediated signaling pathway2.14E-03
48GO:0031348: negative regulation of defense response2.14E-03
49GO:0009695: jasmonic acid biosynthetic process2.14E-03
50GO:0000165: MAPK cascade2.74E-03
51GO:0006662: glycerol ether metabolic process3.26E-03
52GO:0009624: response to nematode5.58E-03
53GO:0008652: cellular amino acid biosynthetic process5.58E-03
54GO:0009409: response to cold5.81E-03
55GO:0043085: positive regulation of catalytic activity6.23E-03
56GO:0050832: defense response to fungus8.09E-03
57GO:0006413: translational initiation9.61E-03
58GO:0006184: obsolete GTP catabolic process1.32E-02
59GO:0045454: cell redox homeostasis1.44E-02
60GO:0006508: proteolysis1.45E-02
61GO:0046686: response to cadmium ion1.98E-02
62GO:0042742: defense response to bacterium3.34E-02
63GO:0009737: response to abscisic acid3.42E-02
RankGO TermAdjusted P value
1GO:0008235: metalloexopeptidase activity1.59E-06
2GO:0004177: aminopeptidase activity6.94E-06
3GO:0004750: ribulose-phosphate 3-epimerase activity2.54E-05
4GO:0004124: cysteine synthase activity1.89E-04
5GO:0016857: racemase and epimerase activity, acting on carbohydrates and derivatives2.64E-04
6GO:0070006: metalloaminopeptidase activity2.64E-04
7GO:0030145: manganese ion binding1.59E-03
8GO:0016168: chlorophyll binding1.73E-03
9GO:0015035: protein disulfide oxidoreductase activity7.62E-03
10GO:0003743: translation initiation factor activity1.12E-02
11GO:0016853: isomerase activity1.78E-02
12GO:0003924: GTPase activity2.98E-02
13GO:0008233: peptidase activity3.34E-02
RankGO TermAdjusted P value
1GO:0030093: chloroplast photosystem I2.54E-05
2GO:0009941: chloroplast envelope4.45E-05
3GO:0009535: chloroplast thylakoid membrane6.64E-05
4GO:0009508: plastid chromosome2.64E-04
5GO:0009507: chloroplast6.14E-04
6GO:0009295: nucleoid9.54E-04
7GO:0009579: thylakoid3.44E-03
8GO:0009570: chloroplast stroma3.76E-03
9GO:0010319: stromule3.81E-03
10GO:0009534: chloroplast thylakoid5.58E-03
11GO:0048046: apoplast6.67E-03