| Rank | GO Term | Adjusted P value | 
|---|
| 1 | GO:0009773: photosynthetic electron transport in photosystem I | 3.94E-07 | 
| 2 | GO:0010207: photosystem II assembly | 1.07E-05 | 
| 3 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 2.97E-05 | 
| 4 | GO:0009657: plastid organization | 3.03E-05 | 
| 5 | GO:0010155: regulation of proton transport | 3.53E-05 | 
| 6 | GO:0035304: regulation of protein dephosphorylation | 4.69E-05 | 
| 7 | GO:0006364: rRNA processing | 7.33E-05 | 
| 8 | GO:0009902: chloroplast relocation | 8.42E-05 | 
| 9 | GO:0019344: cysteine biosynthetic process | 1.23E-04 | 
| 10 | GO:0006733: oxidoreduction coenzyme metabolic process | 1.23E-04 | 
| 11 | GO:0009637: response to blue light | 1.23E-04 | 
| 12 | GO:0010114: response to red light | 1.45E-04 | 
| 13 | GO:0010218: response to far red light | 1.69E-04 | 
| 14 | GO:0019216: regulation of lipid metabolic process | 1.89E-04 | 
| 15 | GO:0009595: detection of biotic stimulus | 1.89E-04 | 
| 16 | GO:0009117: nucleotide metabolic process | 1.89E-04 | 
| 17 | GO:0009744: response to sucrose | 2.26E-04 | 
| 18 | GO:0070084: protein initiator methionine removal | 2.64E-04 | 
| 19 | GO:0009772: photosynthetic electron transport in photosystem II | 2.64E-04 | 
| 20 | GO:0043900: regulation of multi-organism process | 2.64E-04 | 
| 21 | GO:0019748: secondary metabolic process | 2.64E-04 | 
| 22 | GO:0015995: chlorophyll biosynthetic process | 2.72E-04 | 
| 23 | GO:0006535: cysteine biosynthetic process from serine | 3.46E-04 | 
| 24 | GO:0009108: coenzyme biosynthetic process | 4.33E-04 | 
| 25 | GO:0034660: ncRNA metabolic process | 4.33E-04 | 
| 26 | GO:0019538: protein metabolic process | 4.33E-04 | 
| 27 | GO:0009106: lipoate metabolic process | 4.33E-04 | 
| 28 | GO:0006766: vitamin metabolic process | 4.33E-04 | 
| 29 | GO:0009987: cellular process | 4.33E-04 | 
| 30 | GO:0010310: regulation of hydrogen peroxide metabolic process | 5.25E-04 | 
| 31 | GO:0010027: thylakoid membrane organization | 5.70E-04 | 
| 32 | GO:0048868: pollen tube development | 6.25E-04 | 
| 33 | GO:0009072: aromatic amino acid family metabolic process | 6.25E-04 | 
| 34 | GO:0006098: pentose-phosphate shunt | 7.50E-04 | 
| 35 | GO:0009697: salicylic acid biosynthetic process | 8.41E-04 | 
| 36 | GO:0006546: glycine catabolic process | 9.54E-04 | 
| 37 | GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway | 9.54E-04 | 
| 38 | GO:0031408: oxylipin biosynthetic process | 1.20E-03 | 
| 39 | GO:0042793: transcription from plastid promoter | 1.20E-03 | 
| 40 | GO:0006636: unsaturated fatty acid biosynthetic process | 1.32E-03 | 
| 41 | GO:0009749: response to glucose | 1.59E-03 | 
| 42 | GO:0006612: protein targeting to membrane | 1.86E-03 | 
| 43 | GO:0010103: stomatal complex morphogenesis | 1.86E-03 | 
| 44 | GO:0010200: response to chitin | 1.86E-03 | 
| 45 | GO:0046777: protein autophosphorylation | 2.00E-03 | 
| 46 | GO:0010363: regulation of plant-type hypersensitive response | 2.00E-03 | 
| 47 | GO:0009867: jasmonic acid mediated signaling pathway | 2.14E-03 | 
| 48 | GO:0031348: negative regulation of defense response | 2.14E-03 | 
| 49 | GO:0009695: jasmonic acid biosynthetic process | 2.14E-03 | 
| 50 | GO:0000165: MAPK cascade | 2.74E-03 | 
| 51 | GO:0006662: glycerol ether metabolic process | 3.26E-03 | 
| 52 | GO:0009624: response to nematode | 5.58E-03 | 
| 53 | GO:0008652: cellular amino acid biosynthetic process | 5.58E-03 | 
| 54 | GO:0009409: response to cold | 5.81E-03 | 
| 55 | GO:0043085: positive regulation of catalytic activity | 6.23E-03 | 
| 56 | GO:0050832: defense response to fungus | 8.09E-03 | 
| 57 | GO:0006413: translational initiation | 9.61E-03 | 
| 58 | GO:0006184: obsolete GTP catabolic process | 1.32E-02 | 
| 59 | GO:0045454: cell redox homeostasis | 1.44E-02 | 
| 60 | GO:0006508: proteolysis | 1.45E-02 | 
| 61 | GO:0046686: response to cadmium ion | 1.98E-02 | 
| 62 | GO:0042742: defense response to bacterium | 3.34E-02 | 
| 63 | GO:0009737: response to abscisic acid | 3.42E-02 |