Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G175562

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0030243: cellulose metabolic process0.00E+00
2GO:0030388: fructose 1,6-bisphosphate metabolic process0.00E+00
3GO:0035970: peptidyl-threonine dephosphorylation0.00E+00
4GO:2000505: regulation of energy homeostasis0.00E+00
5GO:0015979: photosynthesis3.87E-22
6GO:0010207: photosystem II assembly1.64E-09
7GO:0019344: cysteine biosynthetic process2.03E-09
8GO:0009637: response to blue light2.03E-09
9GO:0010114: response to red light3.30E-09
10GO:0006364: rRNA processing4.46E-09
11GO:0010218: response to far red light5.19E-09
12GO:0035304: regulation of protein dephosphorylation1.14E-08
13GO:0009773: photosynthetic electron transport in photosystem I1.14E-08
14GO:0010196: nonphotochemical quenching4.47E-08
15GO:0009765: photosynthesis, light harvesting5.53E-08
16GO:0070838: divalent metal ion transport1.30E-07
17GO:0009657: plastid organization3.44E-07
18GO:0006098: pentose-phosphate shunt4.29E-07
19GO:0010155: regulation of proton transport4.61E-07
20GO:0018298: protein-chromophore linkage4.61E-07
21GO:0030003: cellular cation homeostasis5.77E-07
22GO:0016117: carotenoid biosynthetic process4.94E-06
23GO:0015995: chlorophyll biosynthetic process2.23E-05
24GO:0009772: photosynthetic electron transport in photosystem II2.65E-05
25GO:0009768: photosynthesis, light harvesting in photosystem I1.93E-04
26GO:0019676: ammonia assimilation cycle1.93E-04
27GO:0071482: cellular response to light stimulus1.93E-04
28GO:0006814: sodium ion transport2.10E-04
29GO:0009744: response to sucrose2.98E-04
30GO:0009624: response to nematode3.79E-04
31GO:0006636: unsaturated fatty acid biosynthetic process4.38E-04
32GO:0010236: plastoquinone biosynthetic process4.65E-04
33GO:0043085: positive regulation of catalytic activity4.74E-04
34GO:0010103: stomatal complex morphogenesis7.52E-04
35GO:0006733: oxidoreduction coenzyme metabolic process7.95E-04
36GO:0005986: sucrose biosynthetic process7.95E-04
37GO:0046777: protein autophosphorylation8.44E-04
38GO:0010027: thylakoid membrane organization9.87E-04
39GO:0019216: regulation of lipid metabolic process1.18E-03
40GO:0009595: detection of biotic stimulus1.18E-03
41GO:0009117: nucleotide metabolic process1.18E-03
42GO:0009902: chloroplast relocation1.39E-03
43GO:0080167: response to karrikin1.53E-03
44GO:0043900: regulation of multi-organism process1.59E-03
45GO:0019748: secondary metabolic process1.59E-03
46GO:0042742: defense response to bacterium2.07E-03
47GO:0006766: vitamin metabolic process2.50E-03
48GO:0009108: coenzyme biosynthetic process2.50E-03
49GO:0010206: photosystem II repair2.50E-03
50GO:0009106: lipoate metabolic process2.50E-03
51GO:0010310: regulation of hydrogen peroxide metabolic process3.02E-03
52GO:0005985: sucrose metabolic process3.02E-03
53GO:0046939: nucleotide phosphorylation3.02E-03
54GO:0016311: dephosphorylation3.04E-03
55GO:0015977: carbon fixation3.59E-03
56GO:0009072: aromatic amino acid family metabolic process3.59E-03
57GO:0009644: response to high light intensity4.07E-03
58GO:0009832: plant-type cell wall biogenesis4.19E-03
59GO:0009409: response to cold4.25E-03
60GO:0009697: salicylic acid biosynthetic process4.82E-03
61GO:0006754: ATP biosynthetic process4.82E-03
62GO:0006354: DNA-templated transcription, elongation4.82E-03
63GO:0006546: glycine catabolic process5.46E-03
64GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway5.46E-03
65GO:0042631: cellular response to water deprivation6.15E-03
66GO:0031408: oxylipin biosynthetic process6.87E-03
67GO:0006833: water transport8.38E-03
68GO:0009750: response to fructose8.38E-03
69GO:0016049: cell growth8.38E-03
70GO:0015992: proton transport9.19E-03
71GO:0009749: response to glucose9.19E-03
72GO:0016126: sterol biosynthetic process9.19E-03
73GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway1.01E-02
74GO:0006612: protein targeting to membrane1.09E-02
75GO:0010200: response to chitin1.09E-02
76GO:0010363: regulation of plant-type hypersensitive response1.17E-02
77GO:0006139: nucleobase-containing compound metabolic process1.17E-02
78GO:0009867: jasmonic acid mediated signaling pathway1.26E-02
79GO:0015986: ATP synthesis coupled proton transport1.26E-02
80GO:0031348: negative regulation of defense response1.26E-02
81GO:0009695: jasmonic acid biosynthetic process1.26E-02
82GO:0000165: MAPK cascade1.65E-02
83GO:0006662: glycerol ether metabolic process1.96E-02
84GO:0019761: glucosinolate biosynthetic process2.18E-02
85GO:0006811: ion transport2.18E-02
86GO:0006099: tricarboxylic acid cycle2.29E-02
87GO:0000023: maltose metabolic process2.65E-02
88GO:0009658: chloroplast organization2.77E-02
89GO:0022900: electron transport chain3.67E-02
90GO:0005975: carbohydrate metabolic process4.78E-02
91GO:0045893: positive regulation of transcription, DNA-templated4.81E-02
92GO:0050832: defense response to fungus4.97E-02
RankGO TermAdjusted P value
1GO:0015131: oxaloacetate transmembrane transporter activity0.00E+00
2GO:0015139: alpha-ketoglutarate transmembrane transporter activity0.00E+00
3GO:0010357: homogentisate solanesyltransferase activity0.00E+00
4GO:0009496: plastoquinol--plastocyanin reductase activity0.00E+00
5GO:0010356: homogentisate geranylgeranyltransferase activity0.00E+00
6GO:0010355: homogentisate farnesyltransferase activity0.00E+00
7GO:0016168: chlorophyll binding5.81E-09
8GO:0015140: malate transmembrane transporter activity1.93E-04
9GO:0050307: sucrose-phosphate phosphatase activity1.93E-04
10GO:0004750: ribulose-phosphate 3-epimerase activity1.93E-04
11GO:0008974: phosphoribulokinase activity1.93E-04
12GO:0016679: oxidoreductase activity, acting on diphenols and related substances as donors1.93E-04
13GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity4.65E-04
14GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity4.65E-04
15GO:0008964: phosphoenolpyruvate carboxylase activity1.18E-03
16GO:0004659: prenyltransferase activity1.18E-03
17GO:0004332: fructose-bisphosphate aldolase activity1.18E-03
18GO:0004017: adenylate kinase activity1.59E-03
19GO:0016857: racemase and epimerase activity, acting on carbohydrates and derivatives1.59E-03
20GO:0019205: nucleobase-containing compound kinase activity2.50E-03
21GO:0019201: nucleotide kinase activity2.50E-03
22GO:0008121: ubiquinol-cytochrome-c reductase activity2.50E-03
23GO:0016791: phosphatase activity2.85E-03
24GO:0042578: phosphoric ester hydrolase activity3.59E-03
25GO:0016776: phosphotransferase activity, phosphate group as acceptor3.59E-03
26GO:0046933: proton-transporting ATP synthase activity, rotational mechanism5.46E-03
27GO:0003993: acid phosphatase activity6.15E-03
28GO:0046961: proton-transporting ATPase activity, rotational mechanism7.62E-03
29GO:0051537: 2 iron, 2 sulfur cluster binding1.26E-02
30GO:0016853: isomerase activity2.04E-02
31GO:0016829: lyase activity2.04E-02
32GO:0005516: calmodulin binding2.89E-02
33GO:0003824: catalytic activity4.27E-02
34GO:0005215: transporter activity4.59E-02
35GO:0015035: protein disulfide oxidoreductase activity4.67E-02
RankGO TermAdjusted P value
1GO:0009783: photosystem II antenna complex0.00E+00
2GO:0009579: thylakoid4.29E-24
3GO:0009522: photosystem I1.76E-19
4GO:0009535: chloroplast thylakoid membrane1.74E-16
5GO:0009507: chloroplast9.85E-16
6GO:0010287: plastoglobule1.13E-13
7GO:0009941: chloroplast envelope1.24E-11
8GO:0009523: photosystem II1.55E-11
9GO:0009538: photosystem I reaction center4.97E-11
10GO:0009534: chloroplast thylakoid2.06E-08
11GO:0009654: photosystem II oxygen evolving complex5.77E-07
12GO:0042651: thylakoid membrane9.64E-06
13GO:0019898: extrinsic component of membrane4.38E-05
14GO:0010319: stromule1.68E-04
15GO:0031977: thylakoid lumen1.86E-04
16GO:0030093: chloroplast photosystem I1.93E-04
17GO:0009517: PSII associated light-harvesting complex II1.93E-04
18GO:0009543: chloroplast thylakoid lumen3.74E-04
19GO:0009533: chloroplast stromal thylakoid4.65E-04
20GO:0016020: membrane5.02E-04
21GO:0009570: chloroplast stroma7.38E-04
22GO:0048046: apoplast1.13E-03
23GO:0009508: plastid chromosome1.59E-03
24GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1)2.50E-03
25GO:0009295: nucleoid5.46E-03