co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G172956

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0043137: DNA replication, removal of RNA primer	0.00E+00
2	GO:0010449: root meristem growth	0.00E+00
3	GO:0070143: mitochondrial alanyl-tRNA aminoacylation	0.00E+00
4	GO:0006419: alanyl-tRNA aminoacylation	0.00E+00
5	GO:0030261: chromosome condensation	0.00E+00
6	GO:0032465: regulation of cytokinesis	0.00E+00
7	GO:0007059: chromosome segregation	2.40E-04
8	GO:0080178: 5-carbamoylmethyl uridine residue modification	2.40E-04
9	GO:0006281: DNA repair	4.46E-04
10	GO:0048316: seed development	5.07E-04
11	GO:0009956: radial pattern formation	5.71E-04
12	GO:0043987: histone H3-S10 phosphorylation	5.71E-04
13	GO:0006094: gluconeogenesis	7.91E-04
14	GO:0006310: DNA recombination	8.99E-04
15	GO:0002098: tRNA wobble uridine modification	9.74E-04
16	GO:0009957: epidermal cell fate specification	9.74E-04
17	GO:0008356: asymmetric cell division	1.43E-03
18	GO:0006265: DNA topological change	1.93E-03
19	GO:0043622: cortical microtubule organization	1.93E-03
20	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	1.93E-03
21	GO:0032875: regulation of DNA endoreduplication	1.93E-03
22	GO:0000226: microtubule cytoskeleton organization	2.01E-03
23	GO:0007049: cell cycle	2.18E-03
24	GO:0010087: phloem or xylem histogenesis	2.46E-03
25	GO:0051276: chromosome organization	2.46E-03
26	GO:0006400: tRNA modification	2.46E-03
27	GO:0048366: leaf development	2.54E-03
28	GO:0055072: iron ion homeostasis	3.05E-03
29	GO:0043039: tRNA aminoacylation	3.71E-03
30	GO:0010074: maintenance of meristem identity	3.71E-03
31	GO:0051604: protein maturation	3.71E-03
32	GO:0048443: stamen development	4.41E-03
33	GO:0090305: nucleic acid phosphodiester bond hydrolysis	4.41E-03
34	GO:0016572: histone phosphorylation	4.41E-03
35	GO:0006342: chromatin silencing	4.41E-03
36	GO:0051301: cell division	5.17E-03
37	GO:0006499: N-terminal protein myristoylation	5.89E-03
38	GO:0006259: DNA metabolic process	5.89E-03
39	GO:0048453: sepal formation	5.89E-03
40	GO:0006284: base-excision repair	5.89E-03
41	GO:0006479: protein methylation	5.89E-03
42	GO:0006974: cellular response to DNA damage stimulus	6.71E-03
43	GO:0048451: petal formation	6.71E-03
44	GO:0001522: pseudouridine synthesis	7.55E-03
45	GO:0010389: regulation of G2/M transition of mitotic cell cycle	7.55E-03
46	GO:0032508: DNA duplex unwinding	7.55E-03
47	GO:0006289: nucleotide-excision repair	8.42E-03
48	GO:0006406: mRNA export from nucleus	8.42E-03
49	GO:0006396: RNA processing	8.85E-03
50	GO:0010197: polar nucleus fusion	9.35E-03
51	GO:0007062: sister chromatid cohesion	1.03E-02
52	GO:0009909: regulation of flower development	1.04E-02
53	GO:0006260: DNA replication	1.09E-02
54	GO:0009966: regulation of signal transduction	1.23E-02
55	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.33E-02
56	GO:0006357: regulation of transcription from RNA polymerase II promoter	1.44E-02
57	GO:0000278: mitotic cell cycle	1.55E-02
58	GO:0009553: embryo sac development	1.55E-02
59	GO:0051258: protein polymerization	1.55E-02
60	GO:0042254: ribosome biogenesis	1.78E-02
61	GO:0007017: microtubule-based process	1.78E-02
62	GO:0031047: gene silencing by RNA	1.90E-02
63	GO:0000394: RNA splicing, via endonucleolytic cleavage and ligation	1.90E-02
64	GO:0009933: meristem structural organization	2.03E-02
65	GO:0006275: regulation of DNA replication	2.03E-02
66	GO:0006096: glycolytic process	2.08E-02
67	GO:0001510: RNA methylation	2.15E-02
68	GO:0006270: DNA replication initiation	2.15E-02
69	GO:0006397: mRNA processing	2.41E-02
70	GO:0009086: methionine biosynthetic process	2.55E-02
71	GO:0000911: cytokinesis by cell plate formation	3.11E-02
72	GO:0051567: histone H3-K9 methylation	3.26E-02
73	GO:0006306: DNA methylation	3.56E-02
74	GO:0006414: translational elongation	3.71E-02
75	GO:0010228: vegetative to reproductive phase transition of meristem	4.36E-02
76	GO:0007018: microtubule-based movement	4.52E-02
77	GO:0032259: methylation	5.00E-02

Rank	GO Term	Adjusted P value
1	GO:0008409: 5'-3' exonuclease activity	0.00E+00
2	GO:0004813: alanine-tRNA ligase activity	0.00E+00
3	GO:0017108: 5'-flap endonuclease activity	2.40E-04
4	GO:0003916: DNA topoisomerase activity	2.40E-04
5	GO:0035175: histone kinase activity (H3-S10 specific)	5.71E-04
6	GO:0070628: proteasome binding	9.74E-04
7	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	1.43E-03
8	GO:0030515: snoRNA binding	1.43E-03
9	GO:0016876: ligase activity, forming aminoacyl-tRNA and related compounds	1.93E-03
10	GO:0003843: 1,3-beta-D-glucan synthase activity	1.93E-03
11	GO:0003729: mRNA binding	2.46E-03
12	GO:0043130: ubiquitin binding	3.71E-03
13	GO:0000049: tRNA binding	5.13E-03
14	GO:0004518: nuclease activity	5.89E-03
15	GO:0003684: damaged DNA binding	5.89E-03
16	GO:0003676: nucleic acid binding	6.13E-03
17	GO:0003697: single-stranded DNA binding	6.71E-03
18	GO:0003690: double-stranded DNA binding	6.71E-03
19	GO:0004519: endonuclease activity	7.55E-03
20	GO:0004527: exonuclease activity	9.35E-03
21	GO:0005200: structural constituent of cytoskeleton	1.33E-02
22	GO:0045735: nutrient reservoir activity	2.55E-02
23	GO:0003746: translation elongation factor activity	2.97E-02
24	GO:0005516: calmodulin binding	3.56E-02
25	GO:0003777: microtubule motor activity	4.52E-02

Rank	GO Term	Adjusted P value
1	GO:0033095: aleurone grain	0.00E+00
2	GO:0005730: nucleolus	2.33E-05
3	GO:0072588: box H/ACA RNP complex	2.40E-04
4	GO:0033588: Elongator holoenzyme complex	9.74E-04
5	GO:0000775: chromosome, centromeric region	9.74E-04
6	GO:0019013: viral nucleocapsid	1.14E-03
7	GO:0000148: 1,3-beta-D-glucan synthase complex	1.93E-03
8	GO:0015030: Cajal body	3.05E-03
9	GO:0016272: prefoldin complex	3.71E-03
10	GO:0005744: mitochondrial inner membrane presequence translocase complex	3.71E-03
11	GO:0016604: nuclear body	3.71E-03
12	GO:0005654: nucleoplasm	1.23E-02
13	GO:0031966: mitochondrial membrane	1.23E-02
14	GO:0030529: intracellular ribonucleoprotein complex	1.28E-02
15	GO:0005874: microtubule	1.46E-02
16	GO:0005819: spindle	1.55E-02
17	GO:0043234: protein complex	1.67E-02
18	GO:0005694: chromosome	2.26E-02
19	GO:0005875: microtubule associated complex	2.68E-02
20	GO:0045271: respiratory chain complex I	3.87E-02
21	GO:0005747: mitochondrial respiratory chain complex I	4.03E-02
22	GO:0005871: kinesin complex	4.36E-02
23	GO:0005743: mitochondrial inner membrane	4.69E-02