Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G162697

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0043137: DNA replication, removal of RNA primer0.00E+00
2GO:0019915: lipid storage3.32E-05
3GO:0051028: mRNA transport4.98E-05
4GO:0045292: mRNA cis splicing, via spliceosome4.98E-05
5GO:0048574: long-day photoperiodism, flowering4.98E-05
6GO:0007112: male meiosis cytokinesis4.98E-05
7GO:0010162: seed dormancy process6.04E-05
8GO:0050826: response to freezing7.15E-05
9GO:0010182: sugar mediated signaling pathway1.27E-04
10GO:0000723: telomere maintenance1.29E-04
11GO:0009845: seed germination1.80E-04
12GO:0000394: RNA splicing, via endonucleolytic cleavage and ligation1.99E-04
13GO:0009933: meristem structural organization2.20E-04
14GO:0045727: positive regulation of translation2.30E-04
15GO:0006168: adenine salvage2.30E-04
16GO:0009086: methionine biosynthetic process3.15E-04
17GO:0031053: primary miRNA processing3.47E-04
18GO:0070084: protein initiator methionine removal4.75E-04
19GO:0009640: photomorphogenesis4.87E-04
20GO:0006366: transcription from RNA polymerase II promoter7.69E-04
21GO:0009987: cellular process7.69E-04
22GO:0010311: lateral root formation9.34E-04
23GO:0010074: maintenance of meristem identity9.34E-04
24GO:0090305: nucleic acid phosphodiester bond hydrolysis1.11E-03
25GO:0006342: chromatin silencing1.11E-03
26GO:0009955: adaxial/abaxial pattern specification1.29E-03
27GO:0009909: regulation of flower development1.35E-03
28GO:0010048: vernalization response1.48E-03
29GO:0006284: base-excision repair1.48E-03
30GO:0009116: nucleoside metabolic process1.48E-03
31GO:0016070: RNA metabolic process1.48E-03
32GO:0006974: cellular response to DNA damage stimulus1.68E-03
33GO:0016571: histone methylation1.88E-03
34GO:0010389: regulation of G2/M transition of mitotic cell cycle1.88E-03
35GO:0006406: mRNA export from nucleus2.08E-03
36GO:0006446: regulation of translational initiation2.28E-03
37GO:0016567: protein ubiquitination2.40E-03
38GO:0001731: formation of translation preinitiation complex2.50E-03
39GO:0006950: response to stress4.25E-03
40GO:0000165: MAPK cascade4.87E-03
41GO:0006275: regulation of DNA replication4.87E-03
42GO:0000226: microtubule cytoskeleton organization5.16E-03
43GO:0009793: embryo development ending in seed dormancy5.31E-03
44GO:0016579: protein deubiquitination5.77E-03
45GO:0048366: leaf development6.09E-03
46GO:0000911: cytokinesis by cell plate formation7.40E-03
47GO:0048481: plant ovule development7.76E-03
48GO:0051567: histone H3-K9 methylation7.76E-03
49GO:0006306: DNA methylation8.45E-03
50GO:0008283: cell proliferation9.94E-03
51GO:0010228: vegetative to reproductive phase transition of meristem1.03E-02
52GO:0009965: leaf morphogenesis1.15E-02
53GO:0045893: positive regulation of transcription, DNA-templated1.40E-02
54GO:0006396: RNA processing1.44E-02
55GO:0006260: DNA replication1.67E-02
56GO:0006413: translational initiation1.71E-02
57GO:0006281: DNA repair2.46E-02
RankGO TermAdjusted P value
1GO:0008409: 5'-3' exonuclease activity0.00E+00
2GO:0004708: MAP kinase kinase activity4.98E-05
3GO:0000339: RNA cap binding4.98E-05
4GO:0017108: 5'-flap endonuclease activity4.98E-05
5GO:0003999: adenine phosphoribosyltransferase activity2.30E-04
6GO:0070006: metalloaminopeptidase activity4.75E-04
7GO:0043047: single-stranded telomeric DNA binding6.17E-04
8GO:0003713: transcription coactivator activity6.17E-04
9GO:0008235: metalloexopeptidase activity6.17E-04
10GO:0043022: ribosome binding9.34E-04
11GO:0004177: aminopeptidase activity1.29E-03
12GO:0004518: nuclease activity1.48E-03
13GO:0004519: endonuclease activity1.88E-03
14GO:0004527: exonuclease activity2.28E-03
15GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor5.77E-03
16GO:0005488: binding1.24E-02
17GO:0016788: hydrolase activity, acting on ester bonds1.71E-02
18GO:0003743: translation initiation factor activity2.00E-02
19GO:0000287: magnesium ion binding2.90E-02
20GO:0003723: RNA binding3.25E-02
RankGO TermAdjusted P value
1GO:0005846: nuclear cap binding complex4.98E-05
2GO:0000784: nuclear chromosome, telomeric region4.98E-05
3GO:0005744: mitochondrial inner membrane presequence translocase complex9.34E-04
4GO:0016282: eukaryotic 43S preinitiation complex2.50E-03
5GO:0033290: eukaryotic 48S preinitiation complex2.50E-03
6GO:0005852: eukaryotic translation initiation factor 3 complex2.73E-03
7GO:0005654: nucleoplasm2.97E-03
8GO:0005635: nuclear envelope4.31E-03
9GO:0009524: phragmoplast5.77E-03
10GO:0015935: small ribosomal subunit7.07E-03
11GO:0005743: mitochondrial inner membrane1.11E-02
12GO:0030529: intracellular ribonucleoprotein complex2.07E-02
13GO:0009505: plant-type cell wall4.85E-02