co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G162663

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0060148: positive regulation of posttranscriptional gene silencing	0.00E+00
2	GO:0045694: regulation of embryo sac egg cell differentiation	0.00E+00
3	GO:0031204: posttranslational protein targeting to membrane, translocation	0.00E+00
4	GO:0009103: lipopolysaccharide biosynthetic process	0.00E+00
5	GO:0000165: MAPK cascade	3.14E-04
6	GO:0051512: positive regulation of unidimensional cell growth	3.74E-04
7	GO:0030307: positive regulation of cell growth	3.74E-04
8	GO:0009168: purine ribonucleoside monophosphate biosynthetic process	3.74E-04
9	GO:2000280: regulation of root development	3.74E-04
10	GO:0010587: miRNA catabolic process	3.74E-04
11	GO:0032264: IMP salvage	3.74E-04
12	GO:0009968: negative regulation of signal transduction	3.74E-04
13	GO:0043157: response to cation stress	3.74E-04
14	GO:0007112: male meiosis cytokinesis	3.74E-04
15	GO:0080141: regulation of jasmonic acid biosynthetic process	3.74E-04
16	GO:0003002: regionalization	3.74E-04
17	GO:0034389: lipid particle organization	8.76E-04
18	GO:0030643: cellular phosphate ion homeostasis	8.76E-04
19	GO:0010109: regulation of photosynthesis	8.76E-04
20	GO:0048831: regulation of shoot system development	1.48E-03
21	GO:0010152: pollen maturation	1.48E-03
22	GO:0006491: N-glycan processing	1.48E-03
23	GO:0045727: positive regulation of translation	1.48E-03
24	GO:0006188: IMP biosynthetic process	1.48E-03
25	GO:0042176: regulation of protein catabolic process	2.15E-03
26	GO:0046470: phosphatidylcholine metabolic process	2.15E-03
27	GO:0006790: sulfur compound metabolic process	2.15E-03
28	GO:0006401: RNA catabolic process	2.15E-03
29	GO:0009867: jasmonic acid mediated signaling pathway	2.31E-03
30	GO:0009738: abscisic acid-activated signaling pathway	2.55E-03
31	GO:0009845: seed germination	2.81E-03
32	GO:0070588: calcium ion transmembrane transport	2.89E-03
33	GO:0010072: primary shoot apical meristem specification	2.89E-03
34	GO:0033044: regulation of chromosome organization	2.89E-03
35	GO:0009913: epidermal cell differentiation	3.76E-03
36	GO:0009410: response to xenobiotic stimulus	3.76E-03
37	GO:0006561: proline biosynthetic process	3.76E-03
38	GO:0051276: chromosome organization	3.76E-03
39	GO:0045132: meiotic chromosome segregation	3.76E-03
40	GO:0006084: acetyl-CoA metabolic process	4.68E-03
41	GO:0030422: production of siRNA involved in RNA interference	4.68E-03
42	GO:0006325: chromatin organization	4.68E-03
43	GO:0010025: wax biosynthetic process	4.68E-03
44	GO:0006367: transcription initiation from RNA polymerase II promoter	4.68E-03
45	GO:0007155: cell adhesion	4.68E-03
46	GO:0016132: brassinosteroid biosynthetic process	4.68E-03
47	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	4.68E-03
48	GO:0006099: tricarboxylic acid cycle	5.45E-03
49	GO:0010310: regulation of hydrogen peroxide metabolic process	5.66E-03
50	GO:0009615: response to virus	5.66E-03
51	GO:0009628: response to abiotic stimulus	5.66E-03
52	GO:0048449: floral organ formation	5.66E-03
53	GO:0000741: karyogamy	5.66E-03
54	GO:0010311: lateral root formation	5.66E-03
55	GO:0010074: maintenance of meristem identity	5.66E-03
56	GO:0015977: carbon fixation	6.73E-03
57	GO:0048765: root hair cell differentiation	6.73E-03
58	GO:0006002: fructose 6-phosphate metabolic process	6.73E-03
59	GO:0042138: meiotic DNA double-strand break formation	6.73E-03
60	GO:0008284: positive regulation of cell proliferation	7.85E-03
61	GO:0010051: xylem and phloem pattern formation	7.85E-03
62	GO:0000398: mRNA splicing, via spliceosome	8.56E-03
63	GO:0045010: actin nucleation	9.04E-03
64	GO:0006312: mitotic recombination	9.04E-03
65	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	1.03E-02
66	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	1.03E-02
67	GO:0019915: lipid storage	1.03E-02
68	GO:0016571: histone methylation	1.16E-02
69	GO:0046854: phosphatidylinositol phosphorylation	1.16E-02
70	GO:0043248: proteasome assembly	1.16E-02
71	GO:0010389: regulation of G2/M transition of mitotic cell cycle	1.16E-02
72	GO:0016042: lipid catabolic process	1.16E-02
73	GO:0007033: vacuole organization	1.16E-02
74	GO:0009266: response to temperature stimulus	1.16E-02
75	GO:0048364: root development	1.18E-02
76	GO:0051607: defense response to virus	1.29E-02
77	GO:0043687: post-translational protein modification	1.29E-02
78	GO:0006406: mRNA export from nucleus	1.29E-02
79	GO:0007030: Golgi organization	1.44E-02
80	GO:0007131: reciprocal meiotic recombination	1.44E-02
81	GO:0010162: seed dormancy process	1.44E-02
82	GO:0045893: positive regulation of transcription, DNA-templated	1.57E-02
83	GO:0016049: cell growth	1.58E-02
84	GO:0050826: response to freezing	1.58E-02
85	GO:0007062: sister chromatid cohesion	1.58E-02
86	GO:0006833: water transport	1.58E-02
87	GO:0006972: hyperosmotic response	1.58E-02
88	GO:0042023: DNA endoreduplication	1.73E-02
89	GO:0009749: response to glucose	1.73E-02
90	GO:0000902: cell morphogenesis	1.73E-02
91	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	1.89E-02
92	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	2.06E-02
93	GO:0006612: protein targeting to membrane	2.06E-02
94	GO:0010193: response to ozone	2.06E-02
95	GO:0035304: regulation of protein dephosphorylation	2.22E-02
96	GO:0010182: sugar mediated signaling pathway	2.22E-02
97	GO:0010363: regulation of plant-type hypersensitive response	2.22E-02
98	GO:0010090: trichome morphogenesis	2.22E-02
99	GO:0000278: mitotic cell cycle	2.40E-02
100	GO:0009553: embryo sac development	2.40E-02
101	GO:0031348: negative regulation of defense response	2.40E-02
102	GO:0048367: shoot system development	2.40E-02
103	GO:0007165: signal transduction	2.41E-02
104	GO:0009751: response to salicylic acid	2.57E-02
105	GO:0035556: intracellular signal transduction	2.75E-02
106	GO:0010119: regulation of stomatal movement	2.94E-02
107	GO:0000413: protein peptidyl-prolyl isomerization	3.13E-02
108	GO:0009933: meristem structural organization	3.13E-02
109	GO:0006275: regulation of DNA replication	3.13E-02
110	GO:0006626: protein targeting to mitochondrion	3.13E-02
111	GO:0051788: response to misfolded protein	3.33E-02
112	GO:0009560: embryo sac egg cell differentiation	3.33E-02
113	GO:0016567: protein ubiquitination	3.50E-02
114	GO:0048573: photoperiodism, flowering	3.52E-02
115	GO:0048193: Golgi vesicle transport	3.52E-02
116	GO:0016579: protein deubiquitination	3.73E-02
117	GO:0006096: glycolytic process	3.83E-02
118	GO:0006486: protein glycosylation	4.15E-02
119	GO:0009860: pollen tube growth	4.15E-02

Rank	GO Term	Adjusted P value
1	GO:0035299: inositol pentakisphosphate 2-kinase activity	0.00E+00
2	GO:0009918: sterol delta7 reductase activity	0.00E+00
3	GO:0008690: 3-deoxy-manno-octulosonate cytidylyltransferase activity	0.00E+00
4	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	0.00E+00
5	GO:0032942: inositol tetrakisphosphate 2-kinase activity	0.00E+00
6	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	3.74E-04
7	GO:0004708: MAP kinase kinase activity	3.74E-04
8	GO:0003968: RNA-directed 5'-3' RNA polymerase activity	3.74E-04
9	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	3.74E-04
10	GO:0004435: phosphatidylinositol phospholipase C activity	3.74E-04
11	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	3.74E-04
12	GO:0003876: AMP deaminase activity	3.74E-04
13	GO:0019239: deaminase activity	8.76E-04
14	GO:0004350: glutamate-5-semialdehyde dehydrogenase activity	8.76E-04
15	GO:0004128: cytochrome-b5 reductase activity, acting on NAD(P)H	8.76E-04
16	GO:0004559: alpha-mannosidase activity	8.76E-04
17	GO:0019204: obsolete nucleotide phosphatase activity	8.76E-04
18	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	1.48E-03
19	GO:0004630: phospholipase D activity	1.48E-03
20	GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	1.48E-03
21	GO:0004602: glutathione peroxidase activity	1.48E-03
22	GO:0008964: phosphoenolpyruvate carboxylase activity	2.15E-03
23	GO:0005388: calcium-transporting ATPase activity	2.15E-03
24	GO:0030234: enzyme regulator activity	2.89E-03
25	GO:0003872: 6-phosphofructokinase activity	7.85E-03
26	GO:0008378: galactosyltransferase activity	9.04E-03
27	GO:0031418: L-ascorbic acid binding	9.04E-03
28	GO:0004707: MAP kinase activity	1.03E-02
29	GO:0003690: double-stranded DNA binding	1.03E-02
30	GO:0042803: protein homodimerization activity	1.12E-02
31	GO:0005509: calcium ion binding	1.75E-02
32	GO:0019829: cation-transporting ATPase activity	1.89E-02
33	GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	1.89E-02
34	GO:0008565: protein transporter activity	2.40E-02
35	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.52E-02
36	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	3.73E-02

Rank	GO Term	Adjusted P value
1	GO:0005673: transcription factor TFIIE complex	0.00E+00
2	GO:0045252: oxoglutarate dehydrogenase complex	3.74E-04
3	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	3.74E-04
4	GO:0031307: integral component of mitochondrial outer membrane	3.74E-04
5	GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)	3.74E-04
6	GO:0005794: Golgi apparatus	7.45E-04
7	GO:0030176: integral component of endoplasmic reticulum membrane	8.76E-04
8	GO:0030136: clathrin-coated vesicle	2.15E-03
9	GO:0005732: small nucleolar ribonucleoprotein complex	2.89E-03
10	GO:0009524: phragmoplast	4.37E-03
11	GO:0005945: 6-phosphofructokinase complex	6.73E-03
12	GO:0005681: spliceosomal complex	1.03E-02
13	GO:0005758: mitochondrial intermembrane space	1.16E-02
14	GO:0005783: endoplasmic reticulum	1.47E-02
15	GO:0009504: cell plate	1.73E-02
16	GO:0005819: spindle	2.40E-02
17	GO:0005829: cytosol	4.19E-02