co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G162529

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0035970: peptidyl-threonine dephosphorylation	0.00E+00
2	GO:0042549: photosystem II stabilization	0.00E+00
3	GO:0015979: photosynthesis	6.01E-19
4	GO:0009765: photosynthesis, light harvesting	1.08E-12
5	GO:0018298: protein-chromophore linkage	2.99E-11
6	GO:0010196: nonphotochemical quenching	3.19E-08
7	GO:0010207: photosystem II assembly	3.52E-08
8	GO:0035304: regulation of protein dephosphorylation	5.19E-07
9	GO:0009773: photosynthetic electron transport in photosystem I	5.19E-07
10	GO:0006364: rRNA processing	1.33E-06
11	GO:0019344: cysteine biosynthetic process	3.29E-06
12	GO:0009637: response to blue light	3.29E-06
13	GO:0010114: response to red light	4.54E-06
14	GO:0010218: response to far red light	6.12E-06
15	GO:0009657: plastid organization	1.47E-05
16	GO:0071482: cellular response to light stimulus	1.67E-04
17	GO:0015995: chlorophyll biosynthetic process	2.91E-04
18	GO:0006636: unsaturated fatty acid biosynthetic process	3.59E-04
19	GO:0010236: plastoquinone biosynthetic process	4.07E-04
20	GO:0010155: regulation of proton transport	5.47E-04
21	GO:0006733: oxidoreduction coenzyme metabolic process	6.97E-04
22	GO:0005986: sucrose biosynthetic process	6.97E-04
23	GO:0019216: regulation of lipid metabolic process	1.04E-03
24	GO:0009595: detection of biotic stimulus	1.04E-03
25	GO:0009117: nucleotide metabolic process	1.04E-03
26	GO:0006098: pentose-phosphate shunt	1.09E-03
27	GO:0080167: response to karrikin	1.20E-03
28	GO:0009772: photosynthetic electron transport in photosystem II	1.40E-03
29	GO:0043900: regulation of multi-organism process	1.40E-03
30	GO:0019748: secondary metabolic process	1.40E-03
31	GO:0016117: carotenoid biosynthetic process	1.60E-03
32	GO:0019761: glucosinolate biosynthetic process	1.72E-03
33	GO:0009108: coenzyme biosynthetic process	2.21E-03
34	GO:0010206: photosystem II repair	2.21E-03
35	GO:0009106: lipoate metabolic process	2.21E-03
36	GO:0010205: photoinhibition	2.21E-03
37	GO:0006766: vitamin metabolic process	2.21E-03
38	GO:0010310: regulation of hydrogen peroxide metabolic process	2.66E-03
39	GO:0009744: response to sucrose	2.67E-03
40	GO:0009072: aromatic amino acid family metabolic process	3.15E-03
41	GO:0009624: response to nematode	3.18E-03
42	GO:0043085: positive regulation of catalytic activity	3.75E-03
43	GO:0006006: glucose metabolic process	4.24E-03
44	GO:0009697: salicylic acid biosynthetic process	4.24E-03
45	GO:0006814: sodium ion transport	4.24E-03
46	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	4.81E-03
47	GO:0006546: glycine catabolic process	4.81E-03
48	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	4.81E-03
49	GO:0042631: cellular response to water deprivation	5.40E-03
50	GO:0009607: response to biotic stimulus	6.03E-03
51	GO:0031408: oxylipin biosynthetic process	6.03E-03
52	GO:0010027: thylakoid membrane organization	6.45E-03
53	GO:0019684: photosynthesis, light reaction	8.06E-03
54	GO:0009749: response to glucose	8.06E-03
55	GO:0042742: defense response to bacterium	8.28E-03
56	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	8.40E-03
57	GO:0008219: cell death	8.79E-03
58	GO:0006612: protein targeting to membrane	9.54E-03
59	GO:0010103: stomatal complex morphogenesis	9.54E-03
60	GO:0010200: response to chitin	9.54E-03
61	GO:0046777: protein autophosphorylation	1.03E-02
62	GO:0010363: regulation of plant-type hypersensitive response	1.03E-02
63	GO:0009867: jasmonic acid mediated signaling pathway	1.11E-02
64	GO:0031348: negative regulation of defense response	1.11E-02
65	GO:0009695: jasmonic acid biosynthetic process	1.11E-02
66	GO:0009902: chloroplast relocation	1.44E-02
67	GO:0000165: MAPK cascade	1.44E-02
68	GO:0006662: glycerol ether metabolic process	1.72E-02
69	GO:0009658: chloroplast organization	2.42E-02
70	GO:0016311: dephosphorylation	2.53E-02
71	GO:0009644: response to high light intensity	3.10E-02
72	GO:0022900: electron transport chain	3.22E-02
73	GO:0006952: defense response	4.09E-02
74	GO:0045893: positive regulation of transcription, DNA-templated	4.22E-02
75	GO:0009737: response to abscisic acid	4.23E-02
76	GO:0044237: cellular metabolic process	4.35E-02
77	GO:0050832: defense response to fungus	4.35E-02

Rank	GO Term	Adjusted P value
1	GO:0010357: homogentisate solanesyltransferase activity	0.00E+00
2	GO:0009496: plastoquinol--plastocyanin reductase activity	0.00E+00
3	GO:0010242: oxygen evolving activity	0.00E+00
4	GO:0010356: homogentisate geranylgeranyltransferase activity	0.00E+00
5	GO:0010355: homogentisate farnesyltransferase activity	0.00E+00
6	GO:0016168: chlorophyll binding	2.99E-11
7	GO:0050307: sucrose-phosphate phosphatase activity	1.67E-04
8	GO:0004750: ribulose-phosphate 3-epimerase activity	1.67E-04
9	GO:0016679: oxidoreductase activity, acting on diphenols and related substances as donors	1.67E-04
10	GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity	4.07E-04
11	GO:0004659: prenyltransferase activity	1.04E-03
12	GO:0004332: fructose-bisphosphate aldolase activity	1.04E-03
13	GO:0016857: racemase and epimerase activity, acting on carbohydrates and derivatives	1.40E-03
14	GO:0008121: ubiquinol-cytochrome-c reductase activity	2.21E-03
15	GO:0008266: poly(U) RNA binding	3.15E-03
16	GO:0003993: acid phosphatase activity	5.40E-03
17	GO:0046872: metal ion binding	5.83E-03
18	GO:0050662: coenzyme binding	9.65E-03
19	GO:0051537: 2 iron, 2 sulfur cluster binding	1.11E-02
20	GO:0005509: calcium ion binding	1.53E-02
21	GO:0016853: isomerase activity	1.69E-02
22	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	1.72E-02
23	GO:0016791: phosphatase activity	2.42E-02
24	GO:0005516: calmodulin binding	2.53E-02
25	GO:0050661: NADP binding	2.75E-02
26	GO:0003824: catalytic activity	2.88E-02
27	GO:0015035: protein disulfide oxidoreductase activity	4.09E-02
28	GO:0051287: NAD binding	4.35E-02
29	GO:0051536: iron-sulfur cluster binding	4.49E-02

Rank	GO Term	Adjusted P value
1	GO:0009783: photosystem II antenna complex	0.00E+00
2	GO:0009279: cell outer membrane	0.00E+00
3	GO:0009579: thylakoid	1.01E-19
4	GO:0010287: plastoglobule	4.99E-18
5	GO:0009522: photosystem I	1.60E-17
6	GO:0009535: chloroplast thylakoid membrane	3.08E-14
7	GO:0009523: photosystem II	7.66E-12
8	GO:0009538: photosystem I reaction center	3.23E-11
9	GO:0009941: chloroplast envelope	4.70E-11
10	GO:0009507: chloroplast	7.79E-11
11	GO:0009534: chloroplast thylakoid	1.50E-05
12	GO:0019898: extrinsic component of membrane	3.47E-05
13	GO:0009654: photosystem II oxygen evolving complex	5.30E-05
14	GO:0031977: thylakoid lumen	1.41E-04
15	GO:0030093: chloroplast photosystem I	1.67E-04
16	GO:0009517: PSII associated light-harvesting complex II	1.67E-04
17	GO:0009543: chloroplast thylakoid lumen	3.05E-04
18	GO:0009533: chloroplast stromal thylakoid	4.07E-04
19	GO:0009508: plastid chromosome	1.40E-03
20	GO:0016020: membrane	1.54E-03
21	GO:0016021: integral component of membrane	2.27E-03
22	GO:0009295: nucleoid	4.81E-03
23	GO:0042651: thylakoid membrane	6.03E-03
24	GO:0009706: chloroplast inner membrane	1.27E-02
25	GO:0048046: apoplast	1.79E-02
26	GO:0010319: stromule	2.01E-02
27	GO:0009570: chloroplast stroma	2.56E-02