co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G161306

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042549: photosystem II stabilization	0.00E+00
2	GO:0035436: triose phosphate transmembrane transport	0.00E+00
3	GO:0015714: phosphoenolpyruvate transport	0.00E+00
4	GO:0030243: cellulose metabolic process	0.00E+00
5	GO:0030388: fructose 1,6-bisphosphate metabolic process	0.00E+00
6	GO:0089722: phosphoenolpyruvate transmembrane transport	0.00E+00
7	GO:0042550: photosystem I stabilization	0.00E+00
8	GO:2000505: regulation of energy homeostasis	0.00E+00
9	GO:0009780: photosynthetic NADP+ reduction	0.00E+00
10	GO:0015979: photosynthesis	3.09E-28
11	GO:0010207: photosystem II assembly	3.38E-11
12	GO:0009773: photosynthetic electron transport in photosystem I	1.90E-09
13	GO:0006098: pentose-phosphate shunt	1.46E-08
14	GO:0009765: photosynthesis, light harvesting	3.67E-07
15	GO:0043085: positive regulation of catalytic activity	4.81E-07
16	GO:0009772: photosynthetic electron transport in photosystem II	5.86E-07
17	GO:0009637: response to blue light	1.09E-06
18	GO:0010114: response to red light	1.62E-06
19	GO:0006364: rRNA processing	2.19E-06
20	GO:0010218: response to far red light	2.34E-06
21	GO:0018298: protein-chromophore linkage	2.97E-06
22	GO:0010103: stomatal complex morphogenesis	3.89E-06
23	GO:0035304: regulation of protein dephosphorylation	5.00E-06
24	GO:0015995: chlorophyll biosynthetic process	7.05E-06
25	GO:0006814: sodium ion transport	1.58E-05
26	GO:0016117: carotenoid biosynthetic process	2.90E-05
27	GO:0010196: nonphotochemical quenching	4.02E-05
28	GO:0009595: detection of biotic stimulus	4.02E-05
29	GO:0019252: starch biosynthetic process	4.42E-05
30	GO:0000023: maltose metabolic process	5.92E-05
31	GO:0070838: divalent metal ion transport	7.40E-05
32	GO:0043900: regulation of multi-organism process	7.40E-05
33	GO:0009624: response to nematode	1.18E-04
34	GO:0015986: ATP synthesis coupled proton transport	1.63E-04
35	GO:0030003: cellular cation homeostasis	1.76E-04
36	GO:0010310: regulation of hydrogen peroxide metabolic process	2.45E-04
37	GO:0009902: chloroplast relocation	2.88E-04
38	GO:0019676: ammonia assimilation cycle	3.58E-04
39	GO:0042742: defense response to bacterium	3.66E-04
40	GO:0010027: thylakoid membrane organization	4.17E-04
41	GO:0019344: cysteine biosynthetic process	4.57E-04
42	GO:0016556: mRNA modification	5.20E-04
43	GO:0009697: salicylic acid biosynthetic process	5.20E-04
44	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	6.34E-04
45	GO:0080167: response to karrikin	7.27E-04
46	GO:0006875: cellular metal ion homeostasis	8.41E-04
47	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	8.41E-04
48	GO:0009409: response to cold	1.02E-03
49	GO:0022900: electron transport chain	1.38E-03
50	GO:0019684: photosynthesis, light reaction	1.39E-03
51	GO:0009657: plastid organization	1.39E-03
52	GO:0019760: glucosinolate metabolic process	1.42E-03
53	GO:0006733: oxidoreduction coenzyme metabolic process	1.42E-03
54	GO:0022904: respiratory electron transport chain	1.42E-03
55	GO:0051289: protein homotetramerization	1.42E-03
56	GO:0009966: regulation of signal transduction	1.58E-03
57	GO:0010155: regulation of proton transport	1.58E-03
58	GO:0006612: protein targeting to membrane	1.77E-03
59	GO:0010200: response to chitin	1.77E-03
60	GO:0010363: regulation of plant-type hypersensitive response	1.98E-03
61	GO:0050821: protein stabilization	2.07E-03
62	GO:0016485: protein processing	2.07E-03
63	GO:0019216: regulation of lipid metabolic process	2.07E-03
64	GO:0051260: protein homooligomerization	2.07E-03
65	GO:0009117: nucleotide metabolic process	2.07E-03
66	GO:0045037: protein import into chloroplast stroma	2.07E-03
67	GO:0009867: jasmonic acid mediated signaling pathway	2.18E-03
68	GO:0031348: negative regulation of defense response	2.18E-03
69	GO:0006796: phosphate-containing compound metabolic process	2.77E-03
70	GO:0034755: iron ion transmembrane transport	2.77E-03
71	GO:0019748: secondary metabolic process	2.77E-03
72	GO:0000165: MAPK cascade	3.18E-03
73	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	4.12E-03
74	GO:0009108: coenzyme biosynthetic process	4.50E-03
75	GO:0010206: photosystem II repair	4.50E-03
76	GO:0009106: lipoate metabolic process	4.50E-03
77	GO:0010205: photoinhibition	4.50E-03
78	GO:0006766: vitamin metabolic process	4.50E-03
79	GO:0005985: sucrose metabolic process	5.43E-03
80	GO:0046939: nucleotide phosphorylation	5.43E-03
81	GO:0015977: carbon fixation	6.45E-03
82	GO:0009072: aromatic amino acid family metabolic process	6.45E-03
83	GO:0009832: plant-type cell wall biogenesis	7.53E-03
84	GO:0009744: response to sucrose	7.60E-03
85	GO:0006006: glucose metabolic process	8.66E-03
86	GO:0006754: ATP biosynthetic process	8.66E-03
87	GO:0006354: DNA-templated transcription, elongation	8.66E-03
88	GO:0006546: glycine catabolic process	9.86E-03
89	GO:0006108: malate metabolic process	1.24E-02
90	GO:0009767: photosynthetic electron transport chain	1.24E-02
91	GO:0031408: oxylipin biosynthetic process	1.24E-02
92	GO:0006636: unsaturated fatty acid biosynthetic process	1.38E-02
93	GO:0006833: water transport	1.52E-02
94	GO:0009750: response to fructose	1.52E-02
95	GO:0016049: cell growth	1.52E-02
96	GO:0050832: defense response to fungus	1.54E-02
97	GO:0015992: proton transport	1.66E-02
98	GO:0009749: response to glucose	1.66E-02
99	GO:0016126: sterol biosynthetic process	1.66E-02
100	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	1.81E-02
101	GO:0006139: nucleobase-containing compound metabolic process	2.13E-02
102	GO:0046777: protein autophosphorylation	2.13E-02
103	GO:0009817: defense response to fungus, incompatible interaction	2.29E-02
104	GO:0009695: jasmonic acid biosynthetic process	2.29E-02
105	GO:0000413: protein peptidyl-prolyl isomerization	3.00E-02
106	GO:0009735: response to cytokinin	3.38E-02
107	GO:0045454: cell redox homeostasis	3.50E-02
108	GO:0006662: glycerol ether metabolic process	3.57E-02
109	GO:0006096: glycolytic process	3.60E-02
110	GO:0019761: glucosinolate biosynthetic process	3.97E-02
111	GO:0006811: ion transport	3.97E-02

Rank	GO Term	Adjusted P value
1	GO:0015131: oxaloacetate transmembrane transporter activity	0.00E+00
2	GO:0015139: alpha-ketoglutarate transmembrane transporter activity	0.00E+00
3	GO:0015121: phosphoenolpyruvate:phosphate antiporter activity	0.00E+00
4	GO:0009496: plastoquinol--plastocyanin reductase activity	0.00E+00
5	GO:0010242: oxygen evolving activity	0.00E+00
6	GO:0030385: ferredoxin:thioredoxin reductase activity	0.00E+00
7	GO:0008937: ferredoxin-NAD(P) reductase activity	0.00E+00
8	GO:0004802: transketolase activity	0.00E+00
9	GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors	0.00E+00
10	GO:0009670: triose-phosphate:phosphate antiporter activity	0.00E+00
11	GO:0016168: chlorophyll binding	8.44E-10
12	GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity	4.82E-06
13	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	2.22E-05
14	GO:0005215: transporter activity	3.11E-04
15	GO:0015088: copper uptake transmembrane transporter activity	3.58E-04
16	GO:0015140: malate transmembrane transporter activity	3.58E-04
17	GO:0004750: ribulose-phosphate 3-epimerase activity	3.58E-04
18	GO:0008974: phosphoribulokinase activity	3.58E-04
19	GO:0016679: oxidoreductase activity, acting on diphenols and related substances as donors	3.58E-04
20	GO:0004618: phosphoglycerate kinase activity	3.58E-04
21	GO:0051920: peroxiredoxin activity	8.41E-04
22	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	8.41E-04
23	GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity	1.42E-03
24	GO:0016984: ribulose-bisphosphate carboxylase activity	2.07E-03
25	GO:0016209: antioxidant activity	2.07E-03
26	GO:0004332: fructose-bisphosphate aldolase activity	2.07E-03
27	GO:0051537: 2 iron, 2 sulfur cluster binding	2.18E-03
28	GO:0005381: iron ion transmembrane transporter activity	2.77E-03
29	GO:0004470: malic enzyme activity	2.77E-03
30	GO:0004017: adenylate kinase activity	2.77E-03
31	GO:0016857: racemase and epimerase activity, acting on carbohydrates and derivatives	2.77E-03
32	GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity	4.50E-03
33	GO:0019201: nucleotide kinase activity	4.50E-03
34	GO:0008121: ubiquinol-cytochrome-c reductase activity	4.50E-03
35	GO:0019205: nucleobase-containing compound kinase activity	4.50E-03
36	GO:0008266: poly(U) RNA binding	6.45E-03
37	GO:0016776: phosphotransferase activity, phosphate group as acceptor	6.45E-03
38	GO:0004427: inorganic diphosphatase activity	6.45E-03
39	GO:0042578: phosphoric ester hydrolase activity	6.45E-03
40	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	7.53E-03
41	GO:0042803: protein homodimerization activity	1.06E-02
42	GO:0046961: proton-transporting ATPase activity, rotational mechanism	1.38E-02
43	GO:0015035: protein disulfide oxidoreductase activity	1.41E-02
44	GO:0004713: protein tyrosine kinase activity	1.52E-02
45	GO:0051287: NAD binding	1.54E-02
46	GO:0005509: calcium ion binding	1.60E-02
47	GO:0051536: iron-sulfur cluster binding	1.61E-02
48	GO:0008080: N-acetyltransferase activity	1.66E-02
49	GO:0009055: electron carrier activity	1.96E-02
50	GO:0015078: hydrogen ion transmembrane transporter activity	2.46E-02
51	GO:0016597: amino acid binding	2.82E-02
52	GO:0051539: 4 iron, 4 sulfur cluster binding	3.19E-02
53	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.38E-02
54	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	3.57E-02
55	GO:0000287: magnesium ion binding	4.15E-02

Rank	GO Term	Adjusted P value
1	GO:0009538: photosystem I reaction center	0.00E+00
2	GO:0009783: photosystem II antenna complex	0.00E+00
3	GO:0030093: chloroplast photosystem I	0.00E+00
4	GO:0009279: cell outer membrane	0.00E+00
5	GO:0009535: chloroplast thylakoid membrane	1.75E-27
6	GO:0009579: thylakoid	1.42E-26
7	GO:0009507: chloroplast	1.48E-26
8	GO:0009522: photosystem I	4.30E-22
9	GO:0009941: chloroplast envelope	3.36E-20
10	GO:0010287: plastoglobule	2.13E-15
11	GO:0009523: photosystem II	8.10E-14
12	GO:0019898: extrinsic component of membrane	6.80E-09
13	GO:0009534: chloroplast thylakoid	9.63E-09
14	GO:0016020: membrane	1.66E-08
15	GO:0009654: photosystem II oxygen evolving complex	1.77E-08
16	GO:0009543: chloroplast thylakoid lumen	8.25E-07
17	GO:0010319: stromule	1.62E-06
18	GO:0031977: thylakoid lumen	1.96E-06
19	GO:0009533: chloroplast stromal thylakoid	4.82E-06
20	GO:0009570: chloroplast stroma	2.41E-05
21	GO:0048046: apoplast	5.21E-05
22	GO:0009508: plastid chromosome	7.40E-05
23	GO:0009517: PSII associated light-harvesting complex II	3.58E-04
24	GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o)	3.58E-04
25	GO:0009295: nucleoid	6.34E-04
26	GO:0042651: thylakoid membrane	8.99E-04
27	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	3.60E-03
28	GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1)	4.50E-03
29	GO:0016021: integral component of membrane	1.23E-02
30	GO:0009706: chloroplast inner membrane	2.64E-02
31	GO:0015935: small ribosomal subunit	4.39E-02