co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G159028

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010288: response to lead ion	0.00E+00
2	GO:0060148: positive regulation of posttranscriptional gene silencing	0.00E+00
3	GO:0006233: dTDP biosynthetic process	0.00E+00
4	GO:0045694: regulation of embryo sac egg cell differentiation	0.00E+00
5	GO:0043157: response to cation stress	2.75E-04
6	GO:0007112: male meiosis cytokinesis	2.75E-04
7	GO:0080141: regulation of jasmonic acid biosynthetic process	2.75E-04
8	GO:0003002: regionalization	2.75E-04
9	GO:0051512: positive regulation of unidimensional cell growth	2.75E-04
10	GO:0030307: positive regulation of cell growth	2.75E-04
11	GO:0010587: miRNA catabolic process	2.75E-04
12	GO:0009968: negative regulation of signal transduction	2.75E-04
13	GO:0016571: histone methylation	5.22E-04
14	GO:0018279: protein N-linked glycosylation via asparagine	6.51E-04
15	GO:0006491: N-glycan processing	1.11E-03
16	GO:0045727: positive regulation of translation	1.11E-03
17	GO:0006168: adenine salvage	1.11E-03
18	GO:0009867: jasmonic acid mediated signaling pathway	1.54E-03
19	GO:0006790: sulfur compound metabolic process	1.63E-03
20	GO:0006401: RNA catabolic process	1.63E-03
21	GO:0008654: phospholipid biosynthetic process	1.63E-03
22	GO:0033044: regulation of chromosome organization	2.18E-03
23	GO:0010072: primary shoot apical meristem specification	2.18E-03
24	GO:0000165: MAPK cascade	2.22E-03
25	GO:0019432: triglyceride biosynthetic process	2.79E-03
26	GO:0051276: chromosome organization	2.79E-03
27	GO:0045132: meiotic chromosome segregation	2.79E-03
28	GO:0009913: epidermal cell differentiation	2.79E-03
29	GO:0009410: response to xenobiotic stimulus	2.79E-03
30	GO:0006561: proline biosynthetic process	2.79E-03
31	GO:0007155: cell adhesion	3.49E-03
32	GO:0016132: brassinosteroid biosynthetic process	3.49E-03
33	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	3.49E-03
34	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	3.49E-03
35	GO:0006084: acetyl-CoA metabolic process	3.49E-03
36	GO:0030422: production of siRNA involved in RNA interference	3.49E-03
37	GO:0006325: chromatin organization	3.49E-03
38	GO:0010025: wax biosynthetic process	3.49E-03
39	GO:0006367: transcription initiation from RNA polymerase II promoter	3.49E-03
40	GO:0005985: sucrose metabolic process	4.23E-03
41	GO:0009628: response to abiotic stimulus	4.23E-03
42	GO:0048449: floral organ formation	4.23E-03
43	GO:0000741: karyogamy	4.23E-03
44	GO:0010311: lateral root formation	4.23E-03
45	GO:0010074: maintenance of meristem identity	4.23E-03
46	GO:0010310: regulation of hydrogen peroxide metabolic process	4.23E-03
47	GO:0009615: response to virus	4.23E-03
48	GO:0048765: root hair cell differentiation	5.01E-03
49	GO:0006002: fructose 6-phosphate metabolic process	5.01E-03
50	GO:0010029: regulation of seed germination	5.01E-03
51	GO:0042138: meiotic DNA double-strand break formation	5.01E-03
52	GO:0040007: growth	5.01E-03
53	GO:0000398: mRNA splicing, via spliceosome	5.57E-03
54	GO:0010118: stomatal movement	5.83E-03
55	GO:0008284: positive regulation of cell proliferation	5.83E-03
56	GO:0010051: xylem and phloem pattern formation	5.83E-03
57	GO:0009116: nucleoside metabolic process	6.72E-03
58	GO:0006312: mitotic recombination	6.72E-03
59	GO:0045010: actin nucleation	6.72E-03
60	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	7.64E-03
61	GO:0019915: lipid storage	7.64E-03
62	GO:0048364: root development	7.72E-03
63	GO:0046854: phosphatidylinositol phosphorylation	8.60E-03
64	GO:0010389: regulation of G2/M transition of mitotic cell cycle	8.60E-03
65	GO:0016998: cell wall macromolecule catabolic process	8.60E-03
66	GO:0043687: post-translational protein modification	9.61E-03
67	GO:0006487: protein N-linked glycosylation	9.61E-03
68	GO:0006406: mRNA export from nucleus	9.61E-03
69	GO:0045893: positive regulation of transcription, DNA-templated	1.02E-02
70	GO:0006636: unsaturated fatty acid biosynthetic process	1.06E-02
71	GO:0010162: seed dormancy process	1.06E-02
72	GO:0006446: regulation of translational initiation	1.06E-02
73	GO:0007131: reciprocal meiotic recombination	1.06E-02
74	GO:0016049: cell growth	1.17E-02
75	GO:0050826: response to freezing	1.17E-02
76	GO:0001731: formation of translation preinitiation complex	1.17E-02
77	GO:0007062: sister chromatid cohesion	1.17E-02
78	GO:0000902: cell morphogenesis	1.29E-02
79	GO:0042023: DNA endoreduplication	1.29E-02
80	GO:0034968: histone lysine methylation	1.29E-02
81	GO:0009739: response to gibberellin	1.40E-02
82	GO:0009966: regulation of signal transduction	1.40E-02
83	GO:0006612: protein targeting to membrane	1.52E-02
84	GO:0010182: sugar mediated signaling pathway	1.64E-02
85	GO:0010363: regulation of plant-type hypersensitive response	1.64E-02
86	GO:0010090: trichome morphogenesis	1.64E-02
87	GO:0035304: regulation of protein dephosphorylation	1.64E-02
88	GO:0048367: shoot system development	1.77E-02
89	GO:0000278: mitotic cell cycle	1.77E-02
90	GO:0031348: negative regulation of defense response	1.77E-02
91	GO:0009751: response to salicylic acid	1.90E-02
92	GO:0009738: abscisic acid-activated signaling pathway	1.90E-02
93	GO:0035556: intracellular signal transduction	2.04E-02
94	GO:0009845: seed germination	2.04E-02
95	GO:0010119: regulation of stomatal movement	2.18E-02
96	GO:0016567: protein ubiquitination	2.29E-02
97	GO:0009933: meristem structural organization	2.31E-02
98	GO:0006275: regulation of DNA replication	2.31E-02
99	GO:0000413: protein peptidyl-prolyl isomerization	2.31E-02
100	GO:0009560: embryo sac egg cell differentiation	2.46E-02
101	GO:0048573: photoperiodism, flowering	2.61E-02
102	GO:0048193: Golgi vesicle transport	2.61E-02
103	GO:0016579: protein deubiquitination	2.76E-02
104	GO:0016192: vesicle-mediated transport	2.81E-02
105	GO:0048366: leaf development	2.91E-02
106	GO:0006099: tricarboxylic acid cycle	3.23E-02
107	GO:0009409: response to cold	3.50E-02
108	GO:0009414: response to water deprivation	3.56E-02
109	GO:0009617: response to bacterium	3.89E-02
110	GO:0009640: photomorphogenesis	3.89E-02
111	GO:0010228: vegetative to reproductive phase transition of meristem	4.98E-02
112	GO:0006970: response to osmotic stress	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0032791: lead ion binding	0.00E+00
2	GO:0004798: thymidylate kinase activity	0.00E+00
3	GO:0003881: CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity	0.00E+00
4	GO:0009918: sterol delta7 reductase activity	0.00E+00
5	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	2.75E-04
6	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	2.75E-04
7	GO:0004708: MAP kinase kinase activity	2.75E-04
8	GO:0019905: syntaxin binding	2.75E-04
9	GO:0003968: RNA-directed 5'-3' RNA polymerase activity	2.75E-04
10	GO:0070300: phosphatidic acid binding	2.75E-04
11	GO:0004559: alpha-mannosidase activity	6.51E-04
12	GO:0019204: obsolete nucleotide phosphatase activity	6.51E-04
13	GO:0004350: glutamate-5-semialdehyde dehydrogenase activity	6.51E-04
14	GO:0008430: selenium binding	6.51E-04
15	GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	1.11E-03
16	GO:0016780: phosphotransferase activity, for other substituted phosphate groups	1.11E-03
17	GO:0000062: fatty-acyl-CoA binding	1.11E-03
18	GO:0003999: adenine phosphoribosyltransferase activity	1.11E-03
19	GO:2001070: starch binding	1.63E-03
20	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	2.18E-03
21	GO:0004143: diacylglycerol kinase activity	3.49E-03
22	GO:0019904: protein domain specific binding	4.23E-03
23	GO:0043022: ribosome binding	4.23E-03
24	GO:0046873: metal ion transmembrane transporter activity	5.83E-03
25	GO:0003951: NAD+ kinase activity	5.83E-03
26	GO:0003872: 6-phosphofructokinase activity	5.83E-03
27	GO:0031418: L-ascorbic acid binding	6.72E-03
28	GO:0003690: double-stranded DNA binding	7.64E-03
29	GO:0018024: histone-lysine N-methyltransferase activity	7.64E-03
30	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	7.72E-03
31	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	1.17E-02
32	GO:0003743: translation initiation factor activity	1.70E-02
33	GO:0031072: heat shock protein binding	1.77E-02
34	GO:0008565: protein transporter activity	1.77E-02
35	GO:0042393: histone binding	1.90E-02
36	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.61E-02
37	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	2.76E-02
38	GO:0005509: calcium ion binding	3.56E-02
39	GO:0030246: carbohydrate binding	4.79E-02

Rank	GO Term	Adjusted P value
1	GO:0005673: transcription factor TFIIE complex	0.00E+00
2	GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)	2.75E-04
3	GO:0008250: oligosaccharyltransferase complex	6.51E-04
4	GO:0030176: integral component of endoplasmic reticulum membrane	6.51E-04
5	GO:0005783: endoplasmic reticulum	1.86E-03
6	GO:0005732: small nucleolar ribonucleoprotein complex	2.18E-03
7	GO:0005789: endoplasmic reticulum membrane	2.24E-03
8	GO:0009524: phragmoplast	2.83E-03
9	GO:0005945: 6-phosphofructokinase complex	5.01E-03
10	GO:0030131: clathrin adaptor complex	5.01E-03
11	GO:0005681: spliceosomal complex	7.64E-03
12	GO:0030117: membrane coat	8.60E-03
13	GO:0033290: eukaryotic 48S preinitiation complex	1.17E-02
14	GO:0016282: eukaryotic 43S preinitiation complex	1.17E-02
15	GO:0005852: eukaryotic translation initiation factor 3 complex	1.29E-02
16	GO:0009505: plant-type cell wall	1.34E-02
17	GO:0005654: nucleoplasm	1.40E-02
18	GO:0005819: spindle	1.77E-02
19	GO:0005829: cytosol	1.86E-02
20	GO:0005635: nuclear envelope	2.04E-02
21	GO:0005737: cytoplasm	2.68E-02
22	GO:0005794: Golgi apparatus	2.71E-02