co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G155329

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010028: xanthophyll cycle	0.00E+00
2	GO:0051188: cofactor biosynthetic process	0.00E+00
3	GO:0010275: NAD(P)H dehydrogenase complex assembly	0.00E+00
4	GO:0042550: photosystem I stabilization	0.00E+00
5	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	0.00E+00
6	GO:0009780: photosynthetic NADP+ reduction	0.00E+00
7	GO:0016117: carotenoid biosynthetic process	2.55E-10
8	GO:0010207: photosystem II assembly	4.08E-10
9	GO:0006098: pentose-phosphate shunt	5.11E-09
10	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	5.11E-09
11	GO:0010027: thylakoid membrane organization	4.92E-08
12	GO:0015995: chlorophyll biosynthetic process	1.31E-07
13	GO:0009902: chloroplast relocation	2.24E-07
14	GO:0006364: rRNA processing	8.96E-07
15	GO:0015979: photosynthesis	3.55E-06
16	GO:0043085: positive regulation of catalytic activity	5.51E-06
17	GO:0019761: glucosinolate biosynthetic process	1.99E-05
18	GO:0009767: photosynthetic electron transport chain	2.58E-05
19	GO:0042793: transcription from plastid promoter	2.58E-05
20	GO:0000023: maltose metabolic process	3.52E-05
21	GO:0000096: sulfur amino acid metabolic process	5.42E-05
22	GO:0010155: regulation of proton transport	6.47E-05
23	GO:0010103: stomatal complex morphogenesis	7.81E-05
24	GO:0009773: photosynthetic electron transport in photosystem I	9.34E-05
25	GO:0046777: protein autophosphorylation	9.34E-05
26	GO:0006766: vitamin metabolic process	1.31E-04
27	GO:0009108: coenzyme biosynthetic process	1.31E-04
28	GO:0010206: photosystem II repair	1.31E-04
29	GO:0034660: ncRNA metabolic process	1.31E-04
30	GO:0009106: lipoate metabolic process	1.31E-04
31	GO:0009072: aromatic amino acid family metabolic process	2.45E-04
32	GO:0019252: starch biosynthetic process	2.86E-04
33	GO:0016050: vesicle organization	2.98E-04
34	GO:0016556: mRNA modification	3.95E-04
35	GO:0006546: glycine catabolic process	4.83E-04
36	GO:0006875: cellular metal ion homeostasis	7.00E-04
37	GO:0044272: sulfur compound biosynthetic process	7.00E-04
38	GO:0006636: unsaturated fatty acid biosynthetic process	8.06E-04
39	GO:0019684: photosynthesis, light reaction	1.07E-03
40	GO:0009657: plastid organization	1.07E-03
41	GO:0016024: CDP-diacylglycerol biosynthetic process	1.20E-03
42	GO:0009695: jasmonic acid biosynthetic process	1.70E-03
43	GO:0045037: protein import into chloroplast stroma	1.75E-03
44	GO:0050821: protein stabilization	1.75E-03
45	GO:0016485: protein processing	1.75E-03
46	GO:0019216: regulation of lipid metabolic process	1.75E-03
47	GO:0009416: response to light stimulus	2.10E-03
48	GO:0019748: secondary metabolic process	2.34E-03
49	GO:0015994: chlorophyll metabolic process	2.34E-03
50	GO:0070838: divalent metal ion transport	2.34E-03
51	GO:0006796: phosphate-containing compound metabolic process	2.34E-03
52	GO:0060416: response to growth hormone	2.34E-03
53	GO:0034755: iron ion transmembrane transport	2.34E-03
54	GO:0000413: protein peptidyl-prolyl isomerization	2.46E-03
55	GO:0006568: tryptophan metabolic process	3.00E-03
56	GO:0080167: response to karrikin	3.21E-03
57	GO:0009637: response to blue light	3.41E-03
58	GO:0030003: cellular cation homeostasis	3.75E-03
59	GO:0009704: de-etiolation	3.75E-03
60	GO:0010114: response to red light	3.96E-03
61	GO:0010218: response to far red light	4.56E-03
62	GO:0000162: tryptophan biosynthetic process	5.38E-03
63	GO:0008652: cellular amino acid biosynthetic process	6.95E-03
64	GO:0048527: lateral root development	7.24E-03
65	GO:0006354: DNA-templated transcription, elongation	7.24E-03
66	GO:0009644: response to high light intensity	7.35E-03
67	GO:0022900: electron transport chain	7.75E-03
68	GO:0009765: photosynthesis, light harvesting	8.22E-03
69	GO:0046854: phosphatidylinositol phosphorylation	9.26E-03
70	GO:0006655: phosphatidylglycerol biosynthetic process	1.03E-02
71	GO:0031408: oxylipin biosynthetic process	1.03E-02
72	GO:0006631: fatty acid metabolic process	1.38E-02
73	GO:0030154: cell differentiation	1.38E-02
74	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	1.51E-02
75	GO:0018298: protein-chromophore linkage	1.51E-02
76	GO:0009966: regulation of signal transduction	1.51E-02
77	GO:0009817: defense response to fungus, incompatible interaction	1.91E-02
78	GO:0045454: cell redox homeostasis	2.70E-02
79	GO:0055114: oxidation-reduction process	2.75E-02
80	GO:0006096: glycolytic process	2.78E-02
81	GO:0006662: glycerol ether metabolic process	2.97E-02
82	GO:0009073: aromatic amino acid family biosynthetic process	2.97E-02
83	GO:0016226: iron-sulfur cluster assembly	3.65E-02
84	GO:0009414: response to water deprivation	3.95E-02
85	GO:0009744: response to sucrose	4.57E-02

Rank	GO Term	Adjusted P value
1	GO:0046422: violaxanthin de-epoxidase activity	0.00E+00
2	GO:0045550: geranylgeranyl reductase activity	0.00E+00
3	GO:0030385: ferredoxin:thioredoxin reductase activity	0.00E+00
4	GO:0008937: ferredoxin-NAD(P) reductase activity	0.00E+00
5	GO:0004802: transketolase activity	0.00E+00
6	GO:0031679: NADH dehydrogenase (plastoquinone) activity	0.00E+00
7	GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors	0.00E+00
8	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	7.03E-06
9	GO:0009055: electron carrier activity	2.23E-05
10	GO:0004618: phosphoglycerate kinase activity	2.98E-04
11	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	2.98E-04
12	GO:0015088: copper uptake transmembrane transporter activity	2.98E-04
13	GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity	7.00E-04
14	GO:0004605: phosphatidate cytidylyltransferase activity	7.00E-04
15	GO:0051920: peroxiredoxin activity	7.00E-04
16	GO:0033897: ribonuclease T2 activity	1.20E-03
17	GO:0016168: chlorophyll binding	1.22E-03
18	GO:0051537: 2 iron, 2 sulfur cluster binding	1.70E-03
19	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	1.75E-03
20	GO:0016209: antioxidant activity	1.75E-03
21	GO:0071949: FAD binding	1.75E-03
22	GO:0004332: fructose-bisphosphate aldolase activity	1.75E-03
23	GO:0005381: iron ion transmembrane transporter activity	2.34E-03
24	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.91E-03
25	GO:0004834: tryptophan synthase activity	3.00E-03
26	GO:0016765: transferase activity, transferring alkyl or aryl (other than methyl) groups	3.75E-03
27	GO:0004427: inorganic diphosphatase activity	5.38E-03
28	GO:0003690: double-stranded DNA binding	8.22E-03
29	GO:0015035: protein disulfide oxidoreductase activity	1.09E-02
30	GO:0051536: iron-sulfur cluster binding	1.24E-02
31	GO:0008080: N-acetyltransferase activity	1.38E-02
32	GO:0051539: 4 iron, 4 sulfur cluster binding	2.65E-02
33	GO:0004364: glutathione transferase activity	3.83E-02

Rank	GO Term	Adjusted P value
1	GO:0009512: cytochrome b6f complex	0.00E+00
2	GO:0009507: chloroplast	7.98E-24
3	GO:0009535: chloroplast thylakoid membrane	5.10E-17
4	GO:0009941: chloroplast envelope	3.99E-14
5	GO:0009543: chloroplast thylakoid lumen	4.94E-11
6	GO:0009570: chloroplast stroma	1.26E-10
7	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	3.79E-09
8	GO:0009579: thylakoid	1.04E-08
9	GO:0009534: chloroplast thylakoid	1.31E-07
10	GO:0031977: thylakoid lumen	9.90E-07
11	GO:0009523: photosystem II	1.22E-05
12	GO:0009508: plastid chromosome	5.42E-05
13	GO:0019898: extrinsic component of membrane	8.81E-05
14	GO:0009654: photosystem II oxygen evolving complex	1.31E-04
15	GO:0030093: chloroplast photosystem I	2.98E-04
16	GO:0009295: nucleoid	4.83E-04
17	GO:0009533: chloroplast stromal thylakoid	7.00E-04
18	GO:0010287: plastoglobule	8.45E-04
19	GO:0009522: photosystem I	1.53E-03
20	GO:0042651: thylakoid membrane	1.03E-02
21	GO:0009706: chloroplast inner membrane	2.20E-02
22	GO:0010319: stromule	3.48E-02
23	GO:0048046: apoplast	4.72E-02