GO Enrichment Analysis of Co-expressed Genes with
GRMZM2G152757
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010157: response to chlorate | 0.00E+00 |
| 2 | GO:0090391: granum assembly | 0.00E+00 |
| 3 | GO:0046653: tetrahydrofolate metabolic process | 0.00E+00 |
| 4 | GO:0010117: photoprotection | 0.00E+00 |
| 5 | GO:0030494: bacteriochlorophyll biosynthetic process | 0.00E+00 |
| 6 | GO:0009658: chloroplast organization | 5.19E-07 |
| 7 | GO:0045037: protein import into chloroplast stroma | 7.27E-05 |
| 8 | GO:0006353: DNA-templated transcription, termination | 7.27E-05 |
| 9 | GO:0010206: photosystem II repair | 3.03E-04 |
| 10 | GO:0019538: protein metabolic process | 3.03E-04 |
| 11 | GO:0018160: peptidyl-pyrromethane cofactor linkage | 5.07E-04 |
| 12 | GO:0032543: mitochondrial translation | 5.07E-04 |
| 13 | GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation | 5.07E-04 |
| 14 | GO:0009102: biotin biosynthetic process | 1.18E-03 |
| 15 | GO:0010380: regulation of chlorophyll biosynthetic process | 1.18E-03 |
| 16 | GO:1901671: positive regulation of superoxide dismutase activity | 1.18E-03 |
| 17 | GO:0019481: L-alanine catabolic process, by transamination | 1.18E-03 |
| 18 | GO:0009081: branched-chain amino acid metabolic process | 1.18E-03 |
| 19 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.44E-03 |
| 20 | GO:0042793: transcription from plastid promoter | 1.48E-03 |
| 21 | GO:0000304: response to singlet oxygen | 1.98E-03 |
| 22 | GO:0006571: tyrosine biosynthetic process | 1.98E-03 |
| 23 | GO:0006450: regulation of translational fidelity | 1.98E-03 |
| 24 | GO:0030497: fatty acid elongation | 1.98E-03 |
| 25 | GO:0015867: ATP transport | 1.98E-03 |
| 26 | GO:0010143: cutin biosynthetic process | 1.98E-03 |
| 27 | GO:0009627: systemic acquired resistance | 2.84E-03 |
| 28 | GO:0045038: protein import into chloroplast thylakoid membrane | 2.86E-03 |
| 29 | GO:0006457: protein folding | 3.57E-03 |
| 30 | GO:0001676: long-chain fatty acid metabolic process | 3.92E-03 |
| 31 | GO:0010072: primary shoot apical meristem specification | 3.92E-03 |
| 32 | GO:0006081: cellular aldehyde metabolic process | 3.92E-03 |
| 33 | GO:0010468: regulation of gene expression | 3.92E-03 |
| 34 | GO:0031347: regulation of defense response | 5.05E-03 |
| 35 | GO:0006102: isocitrate metabolic process | 5.05E-03 |
| 36 | GO:0006749: glutathione metabolic process | 5.05E-03 |
| 37 | GO:0009902: chloroplast relocation | 5.23E-03 |
| 38 | GO:0006508: proteolysis | 5.77E-03 |
| 39 | GO:0033014: tetrapyrrole biosynthetic process | 6.30E-03 |
| 40 | GO:0006189: 'de novo' IMP biosynthetic process | 6.30E-03 |
| 41 | GO:0010025: wax biosynthetic process | 6.30E-03 |
| 42 | GO:0032880: regulation of protein localization | 6.30E-03 |
| 43 | GO:0009704: de-etiolation | 6.30E-03 |
| 44 | GO:0019344: cysteine biosynthetic process | 7.27E-03 |
| 45 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 9.09E-03 |
| 46 | GO:0001666: response to hypoxia | 9.09E-03 |
| 47 | GO:0009407: toxin catabolic process | 1.06E-02 |
| 48 | GO:0000302: response to reactive oxygen species | 1.06E-02 |
| 49 | GO:0015995: chlorophyll biosynthetic process | 1.48E-02 |
| 50 | GO:0006655: phosphatidylglycerol biosynthetic process | 1.75E-02 |
| 51 | GO:0031408: oxylipin biosynthetic process | 1.75E-02 |
| 52 | GO:0048316: seed development | 1.75E-02 |
| 53 | GO:0006855: drug transmembrane transport | 1.95E-02 |
| 54 | GO:0034976: response to endoplasmic reticulum stress | 2.15E-02 |
| 55 | GO:0009058: biosynthetic process | 2.35E-02 |
| 56 | GO:0030154: cell differentiation | 2.36E-02 |
| 57 | GO:0006950: response to stress | 2.42E-02 |
| 58 | GO:0045893: positive regulation of transcription, DNA-templated | 2.42E-02 |
| 59 | GO:0044267: cellular protein metabolic process | 2.57E-02 |
| 60 | GO:0010155: regulation of proton transport | 2.57E-02 |
| 61 | GO:0010103: stomatal complex morphogenesis | 2.79E-02 |
| 62 | GO:0071555: cell wall organization | 2.86E-02 |
| 63 | GO:0010027: thylakoid membrane organization | 2.98E-02 |
| 64 | GO:0035304: regulation of protein dephosphorylation | 3.02E-02 |
| 65 | GO:0046777: protein autophosphorylation | 3.02E-02 |
| 66 | GO:0048367: shoot system development | 3.25E-02 |
| 67 | GO:0006098: pentose-phosphate shunt | 3.88E-02 |
| 68 | GO:0009853: photorespiration | 3.99E-02 |
| 69 | GO:0009933: meristem structural organization | 4.25E-02 |
| 70 | GO:0006626: protein targeting to mitochondrion | 4.25E-02 |
| 71 | GO:0006633: fatty acid biosynthetic process | 4.30E-02 |
| 72 | GO:0030163: protein catabolic process | 4.52E-02 |
| 73 | GO:0009735: response to cytokinin | 4.79E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004076: biotin synthase activity | 0.00E+00 |
| 2 | GO:0046408: chlorophyll synthetase activity | 0.00E+00 |
| 3 | GO:0008864: formyltetrahydrofolate deformylase activity | 0.00E+00 |
| 4 | GO:0046577: long-chain-alcohol oxidase activity | 0.00E+00 |
| 5 | GO:0004252: serine-type endopeptidase activity | 1.07E-05 |
| 6 | GO:0004362: glutathione-disulfide reductase activity | 5.07E-04 |
| 7 | GO:0004467: long-chain fatty acid-CoA ligase activity | 5.07E-04 |
| 8 | GO:0003989: acetyl-CoA carboxylase activity | 5.07E-04 |
| 9 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 5.07E-04 |
| 10 | GO:0004418: hydroxymethylbilane synthase activity | 5.07E-04 |
| 11 | GO:0031957: very long-chain fatty acid-CoA ligase activity | 5.07E-04 |
| 12 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 6.94E-04 |
| 13 | GO:0052655: L-valine transaminase activity | 1.18E-03 |
| 14 | GO:0004084: branched-chain-amino-acid transaminase activity | 1.18E-03 |
| 15 | GO:0008977: prephenate dehydrogenase (NAD+) activity | 1.18E-03 |
| 16 | GO:0052654: L-leucine transaminase activity | 1.18E-03 |
| 17 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 1.18E-03 |
| 18 | GO:0004665: prephenate dehydrogenase (NADP+) activity | 1.18E-03 |
| 19 | GO:0004450: isocitrate dehydrogenase (NADP+) activity | 1.18E-03 |
| 20 | GO:0005347: ATP transmembrane transporter activity | 1.18E-03 |
| 21 | GO:0004075: biotin carboxylase activity | 1.18E-03 |
| 22 | GO:0052656: L-isoleucine transaminase activity | 1.18E-03 |
| 23 | GO:0000774: adenyl-nucleotide exchange factor activity | 1.98E-03 |
| 24 | GO:0042803: protein homodimerization activity | 2.73E-03 |
| 25 | GO:0004659: prenyltransferase activity | 2.86E-03 |
| 26 | GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity | 2.86E-03 |
| 27 | GO:0016668: oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor | 2.86E-03 |
| 28 | GO:0016884: carbon-nitrogen ligase activity, with glutamine as amido-N-donor | 6.30E-03 |
| 29 | GO:0051087: chaperone binding | 7.65E-03 |
| 30 | GO:0046914: transition metal ion binding | 1.22E-02 |
| 31 | GO:0048037: cofactor binding | 1.39E-02 |
| 32 | GO:0043531: ADP binding | 1.39E-02 |
| 33 | GO:0003690: double-stranded DNA binding | 1.39E-02 |
| 34 | GO:0015238: drug transmembrane transporter activity | 1.75E-02 |
| 35 | GO:0004650: polygalacturonase activity | 1.95E-02 |
| 36 | GO:0016760: cellulose synthase (UDP-forming) activity | 1.95E-02 |
| 37 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 2.36E-02 |
| 38 | GO:0005507: copper ion binding | 2.36E-02 |
| 39 | GO:0051287: NAD binding | 2.53E-02 |
| 40 | GO:0015297: antiporter activity | 3.02E-02 |
| 41 | GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 3.22E-02 |
| 42 | GO:0050660: flavin adenine dinucleotide binding | 4.01E-02 |
| 43 | GO:0008483: transaminase activity | 4.52E-02 |
| 44 | GO:0042802: identical protein binding | 4.52E-02 |
| 45 | GO:0030170: pyridoxal phosphate binding | 4.89E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019867: outer membrane | 0.00E+00 |
| 2 | GO:0009941: chloroplast envelope | 4.19E-11 |
| 3 | GO:0009507: chloroplast | 2.31E-09 |
| 4 | GO:0009532: plastid stroma | 1.17E-07 |
| 5 | GO:0009570: chloroplast stroma | 8.75E-06 |
| 6 | GO:0009707: chloroplast outer membrane | 1.31E-04 |
| 7 | GO:0009840: chloroplastic endopeptidase Clp complex | 1.31E-04 |
| 8 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 5.07E-04 |
| 9 | GO:0009526: plastid envelope | 5.07E-04 |
| 10 | GO:0080085: signal recognition particle, chloroplast targeting | 5.07E-04 |
| 11 | GO:0009533: chloroplast stromal thylakoid | 1.18E-03 |
| 12 | GO:0009536: plastid | 1.48E-03 |
| 13 | GO:0009534: chloroplast thylakoid | 2.23E-03 |
| 14 | GO:0009535: chloroplast thylakoid membrane | 4.32E-03 |
| 15 | GO:0042651: thylakoid membrane | 1.75E-02 |
| 16 | GO:0009706: chloroplast inner membrane | 3.74E-02 |
| 17 | GO:0005759: mitochondrial matrix | 4.25E-02 |