co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G135341

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0043137: DNA replication, removal of RNA primer	0.00E+00
2	GO:0010389: regulation of G2/M transition of mitotic cell cycle	6.43E-05
3	GO:0042276: error-prone translesion synthesis	6.64E-05
4	GO:0006260: DNA replication	1.45E-04
5	GO:0009956: radial pattern formation	1.69E-04
6	GO:0009755: hormone-mediated signaling pathway	1.69E-04
7	GO:0006281: DNA repair	3.26E-04
8	GO:0006275: regulation of DNA replication	3.29E-04
9	GO:0007049: cell cycle	3.93E-04
10	GO:0008356: asymmetric cell division	4.48E-04
11	GO:0051301: cell division	9.65E-04
12	GO:0055072: iron ion homeostasis	9.93E-04
13	GO:0009934: regulation of meristem structural organization	9.93E-04
14	GO:0048449: floral organ formation	1.20E-03
15	GO:0010074: maintenance of meristem identity	1.20E-03
16	GO:0090305: nucleic acid phosphodiester bond hydrolysis	1.42E-03
17	GO:0016572: histone phosphorylation	1.42E-03
18	GO:0016570: histone modification	1.88E-03
19	GO:0010048: vernalization response	1.88E-03
20	GO:0006284: base-excision repair	1.88E-03
21	GO:0009909: regulation of flower development	1.94E-03
22	GO:0006974: cellular response to DNA damage stimulus	2.12E-03
23	GO:0019915: lipid storage	2.12E-03
24	GO:0016571: histone methylation	2.37E-03
25	GO:0006289: nucleotide-excision repair	2.63E-03
26	GO:0006406: mRNA export from nucleus	2.63E-03
27	GO:0010162: seed dormancy process	2.91E-03
28	GO:0050826: response to freezing	3.21E-03
29	GO:0006914: autophagy	3.52E-03
30	GO:0006310: DNA recombination	3.83E-03
31	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	4.16E-03
32	GO:0010182: sugar mediated signaling pathway	4.50E-03
33	GO:0009845: seed germination	5.52E-03
34	GO:0009933: meristem structural organization	6.25E-03
35	GO:0016579: protein deubiquitination	7.43E-03
36	GO:0048366: leaf development	7.83E-03
37	GO:0009640: photomorphogenesis	1.04E-02
38	GO:0016311: dephosphorylation	1.09E-02
39	GO:0000398: mRNA splicing, via spliceosome	1.18E-02
40	GO:0010228: vegetative to reproductive phase transition of meristem	1.33E-02
41	GO:0007018: microtubule-based movement	1.38E-02
42	GO:0045893: positive regulation of transcription, DNA-templated	1.81E-02
43	GO:0006396: RNA processing	1.86E-02
44	GO:0006470: protein dephosphorylation	2.65E-02
45	GO:0016567: protein ubiquitination	3.19E-02
46	GO:0006950: response to stress	4.76E-02

Rank	GO Term	Adjusted P value
1	GO:0008409: 5'-3' exonuclease activity	0.00E+00
2	GO:0008420: CTD phosphatase activity	0.00E+00
3	GO:0030337: DNA polymerase processivity factor activity	6.64E-05
4	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	6.64E-05
5	GO:0017108: 5'-flap endonuclease activity	6.64E-05
6	GO:0070628: proteasome binding	3.00E-04
7	GO:0043130: ubiquitin binding	1.20E-03
8	GO:0008017: microtubule binding	1.79E-03
9	GO:0004518: nuclease activity	1.88E-03
10	GO:0003684: damaged DNA binding	1.88E-03
11	GO:0004519: endonuclease activity	2.37E-03
12	GO:0004527: exonuclease activity	2.91E-03
13	GO:0016791: phosphatase activity	1.04E-02
14	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	1.33E-02
15	GO:0003777: microtubule motor activity	1.38E-02
16	GO:0050897: cobalt ion binding	1.53E-02
17	GO:0004721: phosphoprotein phosphatase activity	1.59E-02
18	GO:0016788: hydrolase activity, acting on ester bonds	2.21E-02
19	GO:0003677: DNA binding	2.36E-02
20	GO:0051082: unfolded protein binding	2.85E-02
21	GO:0000287: magnesium ion binding	3.76E-02
22	GO:0003723: RNA binding	4.69E-02

Rank	GO Term	Adjusted P value
1	GO:0000307: cyclin-dependent protein kinase holoenzyme complex	0.00E+00
2	GO:0043626: PCNA complex	6.64E-05
3	GO:0000775: chromosome, centromeric region	3.00E-04
4	GO:0016272: prefoldin complex	1.20E-03
5	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.20E-03
6	GO:0005681: spliceosomal complex	2.12E-03
7	GO:0005634: nucleus	2.32E-03
8	GO:0005654: nucleoplasm	3.83E-03
9	GO:0005635: nuclear envelope	5.52E-03
10	GO:0005875: microtubule associated complex	8.25E-03
11	GO:0005871: kinesin complex	1.33E-02
12	GO:0005743: mitochondrial inner membrane	1.43E-02
13	GO:0005730: nucleolus	2.20E-02
14	GO:0005874: microtubule	2.65E-02
15	GO:0005694: chromosome	3.61E-02