Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G131793

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0009143: nucleoside triphosphate catabolic process0.00E+00
2GO:0009204: deoxyribonucleoside triphosphate catabolic process0.00E+00
3GO:0070143: mitochondrial alanyl-tRNA aminoacylation0.00E+00
4GO:0006419: alanyl-tRNA aminoacylation0.00E+00
5GO:0048574: long-day photoperiodism, flowering4.98E-05
6GO:0009909: regulation of flower development7.75E-05
7GO:0006094: gluconeogenesis8.37E-05
8GO:0006281: DNA repair1.90E-04
9GO:0010638: positive regulation of organelle organization2.30E-04
10GO:0048235: pollen sperm cell differentiation2.30E-04
11GO:0009117: nucleotide metabolic process3.47E-04
12GO:0006265: DNA topological change4.75E-04
13GO:0033044: regulation of chromosome organization4.75E-04
14GO:0009640: photomorphogenesis4.87E-04
15GO:0010050: vegetative phase change6.17E-04
16GO:0007267: cell-cell signaling6.17E-04
17GO:0043039: tRNA aminoacylation9.34E-04
18GO:0010073: meristem maintenance9.34E-04
19GO:0010074: maintenance of meristem identity9.34E-04
20GO:0051604: protein maturation9.34E-04
21GO:0016572: histone phosphorylation1.11E-03
22GO:0006338: chromatin remodeling1.29E-03
23GO:0006499: N-terminal protein myristoylation1.48E-03
24GO:0006259: DNA metabolic process1.48E-03
25GO:0006312: mitotic recombination1.48E-03
26GO:0009616: virus induced gene silencing1.48E-03
27GO:0019915: lipid storage1.68E-03
28GO:0031048: chromatin silencing by small RNA2.08E-03
29GO:0006406: mRNA export from nucleus2.08E-03
30GO:0010014: meristem initiation2.28E-03
31GO:0007131: reciprocal meiotic recombination2.28E-03
32GO:0010162: seed dormancy process2.28E-03
33GO:0009855: determination of bilateral symmetry2.28E-03
34GO:0016567: protein ubiquitination2.40E-03
35GO:0050826: response to freezing2.50E-03
36GO:0042545: cell wall modification2.50E-03
37GO:0006096: glycolytic process2.63E-03
38GO:0034968: histone lysine methylation2.73E-03
39GO:0010267: production of ta-siRNAs involved in RNA interference2.97E-03
40GO:0035196: production of miRNAs involved in gene silencing by miRNA2.97E-03
41GO:0009664: plant-type cell wall organization2.97E-03
42GO:0044267: cellular protein metabolic process2.97E-03
43GO:0010182: sugar mediated signaling pathway3.49E-03
44GO:0010090: trichome morphogenesis3.49E-03
45GO:0006346: methylation-dependent chromatin silencing3.75E-03
46GO:0009845: seed germination4.31E-03
47GO:0000394: RNA splicing, via endonucleolytic cleavage and ligation4.59E-03
48GO:0009560: embryo sac egg cell differentiation5.16E-03
49GO:0009220: pyrimidine ribonucleotide biosynthetic process5.77E-03
50GO:0009086: methionine biosynthetic process6.09E-03
51GO:0051567: histone H3-K9 methylation7.76E-03
52GO:0006306: DNA methylation8.45E-03
53GO:0000398: mRNA splicing, via spliceosome9.19E-03
54GO:0006952: defense response1.35E-02
55GO:0006396: RNA processing1.44E-02
56GO:0006260: DNA replication1.67E-02
57GO:0006334: nucleosome assembly2.41E-02
58GO:0009651: response to salt stress3.25E-02
59GO:0006629: lipid metabolic process3.93E-02
60GO:0009793: embryo development ending in seed dormancy4.32E-02
61GO:0046686: response to cadmium ion4.58E-02
RankGO TermAdjusted P value
1GO:0047429: nucleoside-triphosphate diphosphatase activity0.00E+00
2GO:0004813: alanine-tRNA ligase activity0.00E+00
3GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity3.47E-04
4GO:0016876: ligase activity, forming aminoacyl-tRNA and related compounds4.75E-04
5GO:0000049: tRNA binding1.29E-03
6GO:0005200: structural constituent of cytoskeleton3.22E-03
7GO:0016788: hydrolase activity, acting on ester bonds1.71E-02
8GO:0004842: ubiquitin-protein transferase activity1.90E-02
9GO:0051082: unfolded protein binding2.20E-02
10GO:0046982: protein heterodimerization activity3.14E-02
11GO:0003677: DNA binding4.07E-02
12GO:0003676: nucleic acid binding4.58E-02
RankGO TermAdjusted P value
1GO:0000812: Swr1 complex0.00E+00
2GO:0035267: NuA4 histone acetyltransferase complex4.98E-05
3GO:0005730: nucleolus6.00E-05
4GO:0019013: viral nucleocapsid1.27E-04
5GO:0005694: chromosome2.47E-04
6GO:0031011: Ino80 complex6.17E-04
7GO:0015030: Cajal body7.69E-04
8GO:0000151: ubiquitin ligase complex1.68E-03
9GO:0005654: nucleoplasm2.97E-03
10GO:0030529: intracellular ribonucleoprotein complex2.07E-02
11GO:0000786: nucleosome2.20E-02
12GO:0005618: cell wall4.40E-02