Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G129431

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0045694: regulation of embryo sac egg cell differentiation0.00E+00
2GO:0010165: response to X-ray0.00E+00
3GO:0045951: positive regulation of mitotic recombination0.00E+00
4GO:0010288: response to lead ion0.00E+00
5GO:0051276: chromosome organization5.38E-05
6GO:0043157: response to cation stress2.19E-04
7GO:0007112: male meiosis cytokinesis2.19E-04
8GO:0080141: regulation of jasmonic acid biosynthetic process2.19E-04
9GO:0003002: regionalization2.19E-04
10GO:0051512: positive regulation of unidimensional cell growth2.19E-04
11GO:0030307: positive regulation of cell growth2.19E-04
12GO:0048519: negative regulation of biological process2.19E-04
13GO:0010587: miRNA catabolic process2.19E-04
14GO:0009968: negative regulation of signal transduction2.19E-04
15GO:0080170: hydrogen peroxide transmembrane transport5.25E-04
16GO:0007062: sister chromatid cohesion6.08E-04
17GO:0045727: positive regulation of translation8.95E-04
18GO:0009646: response to absence of light8.95E-04
19GO:0006790: sulfur compound metabolic process1.32E-03
20GO:0006401: RNA catabolic process1.32E-03
21GO:0008654: phospholipid biosynthetic process1.32E-03
22GO:0006275: regulation of DNA replication1.65E-03
23GO:0009887: animal organ morphogenesis1.78E-03
24GO:0006461: protein complex assembly1.78E-03
25GO:0033044: regulation of chromosome organization1.78E-03
26GO:0048439: flower morphogenesis1.78E-03
27GO:0045132: meiotic chromosome segregation2.27E-03
28GO:0009913: epidermal cell differentiation2.27E-03
29GO:0009410: response to xenobiotic stimulus2.27E-03
30GO:0006325: chromatin organization2.81E-03
31GO:0007155: cell adhesion2.81E-03
32GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway2.81E-03
33GO:0009628: response to abiotic stimulus3.41E-03
34GO:0048449: floral organ formation3.41E-03
35GO:0000741: karyogamy3.41E-03
36GO:0010311: lateral root formation3.41E-03
37GO:0010074: maintenance of meristem identity3.41E-03
38GO:0006302: double-strand break repair4.05E-03
39GO:0048765: root hair cell differentiation4.05E-03
40GO:0042138: meiotic DNA double-strand break formation4.05E-03
41GO:0000398: mRNA splicing, via spliceosome4.09E-03
42GO:0010051: xylem and phloem pattern formation4.73E-03
43GO:0008284: positive regulation of cell proliferation4.73E-03
44GO:0045010: actin nucleation5.42E-03
45GO:0006312: mitotic recombination5.42E-03
46GO:0019915: lipid storage6.16E-03
47GO:0016571: histone methylation6.94E-03
48GO:0046854: phosphatidylinositol phosphorylation6.94E-03
49GO:0010389: regulation of G2/M transition of mitotic cell cycle6.94E-03
50GO:0045893: positive regulation of transcription, DNA-templated7.51E-03
51GO:0043687: post-translational protein modification7.75E-03
52GO:0006406: mRNA export from nucleus7.75E-03
53GO:0010162: seed dormancy process8.59E-03
54GO:0009855: determination of bilateral symmetry8.59E-03
55GO:0006446: regulation of translational initiation8.59E-03
56GO:0007131: reciprocal meiotic recombination8.59E-03
57GO:0050826: response to freezing9.46E-03
58GO:0001731: formation of translation preinitiation complex9.46E-03
59GO:0006833: water transport9.46E-03
60GO:0006972: hyperosmotic response9.46E-03
61GO:0016126: sterol biosynthetic process1.03E-02
62GO:0000724: double-strand break repair via homologous recombination1.03E-02
63GO:0042023: DNA endoreduplication1.03E-02
64GO:0009269: response to desiccation1.13E-02
65GO:0010182: sugar mediated signaling pathway1.32E-02
66GO:0010090: trichome morphogenesis1.32E-02
67GO:0048367: shoot system development1.43E-02
68GO:0000278: mitotic cell cycle1.43E-02
69GO:0009738: abscisic acid-activated signaling pathway1.53E-02
70GO:0035556: intracellular signal transduction1.64E-02
71GO:0009845: seed germination1.64E-02
72GO:0009933: meristem structural organization1.86E-02
73GO:0000165: MAPK cascade1.86E-02
74GO:0006270: DNA replication initiation1.98E-02
75GO:0009560: embryo sac egg cell differentiation1.98E-02
76GO:0048573: photoperiodism, flowering2.10E-02
77GO:0016579: protein deubiquitination2.21E-02
78GO:0051726: regulation of cell cycle2.46E-02
79GO:0009414: response to water deprivation2.62E-02
80GO:0009640: photomorphogenesis3.13E-02
81GO:0016310: phosphorylation3.31E-02
82GO:0009793: embryo development ending in seed dormancy3.69E-02
83GO:0009624: response to nematode3.85E-02
84GO:0008283: cell proliferation3.85E-02
85GO:0006970: response to osmotic stress4.00E-02
86GO:0010228: vegetative to reproductive phase transition of meristem4.00E-02
87GO:0048364: root development4.46E-02
RankGO TermAdjusted P value
1GO:0032791: lead ion binding0.00E+00
2GO:0003881: CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity0.00E+00
3GO:0070300: phosphatidic acid binding2.19E-04
4GO:0000248: C-5 sterol desaturase activity2.19E-04
5GO:0035299: inositol pentakisphosphate 2-kinase activity2.19E-04
6GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity2.19E-04
7GO:0004708: MAP kinase kinase activity2.19E-04
8GO:0019905: syntaxin binding2.19E-04
9GO:0019204: obsolete nucleotide phosphatase activity5.25E-04
10GO:0016780: phosphotransferase activity, for other substituted phosphate groups8.95E-04
11GO:0000062: fatty-acyl-CoA binding8.95E-04
12GO:0004143: diacylglycerol kinase activity2.81E-03
13GO:0043022: ribosome binding3.41E-03
14GO:0003951: NAD+ kinase activity4.73E-03
15GO:0031418: L-ascorbic acid binding5.42E-03
16GO:0003690: double-stranded DNA binding6.16E-03
17GO:0005506: iron ion binding1.83E-02
18GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen2.01E-02
19GO:0016301: kinase activity3.38E-02
20GO:0008026: ATP-dependent helicase activity3.70E-02
21GO:0016772: transferase activity, transferring phosphorus-containing groups3.80E-02
22GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors4.46E-02
23GO:0005524: ATP binding4.66E-02
24GO:0004674: protein serine/threonine kinase activity4.66E-02
25GO:0016881: acid-amino acid ligase activity4.78E-02
RankGO TermAdjusted P value
1GO:0032783: ELL-EAF complex0.00E+00
2GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)2.19E-04
3GO:0030915: Smc5-Smc6 complex1.32E-03
4GO:0005732: small nucleolar ribonucleoprotein complex1.78E-03
5GO:0005681: spliceosomal complex6.16E-03
6GO:0033290: eukaryotic 48S preinitiation complex9.46E-03
7GO:0016282: eukaryotic 43S preinitiation complex9.46E-03
8GO:0005852: eukaryotic translation initiation factor 3 complex1.03E-02
9GO:0009524: phragmoplast2.21E-02