| Rank | GO Term | Adjusted P value |
|---|
| 1 | GO:0043137: DNA replication, removal of RNA primer | 0.00E+00 |
| 2 | GO:0006260: DNA replication | 6.60E-07 |
| 3 | GO:0006281: DNA repair | 2.24E-06 |
| 4 | GO:0019915: lipid storage | 1.64E-05 |
| 5 | GO:0010162: seed dormancy process | 3.03E-05 |
| 6 | GO:0009909: regulation of flower development | 3.07E-05 |
| 7 | GO:1990426: mitotic recombination-dependent replication fork processing | 3.16E-05 |
| 8 | GO:0045292: mRNA cis splicing, via spliceosome | 3.16E-05 |
| 9 | GO:0048574: long-day photoperiodism, flowering | 3.16E-05 |
| 10 | GO:0051028: mRNA transport | 3.16E-05 |
| 11 | GO:0050826: response to freezing | 3.60E-05 |
| 12 | GO:0010182: sugar mediated signaling pathway | 6.54E-05 |
| 13 | GO:0009845: seed germination | 9.38E-05 |
| 14 | GO:0009933: meristem structural organization | 1.16E-04 |
| 15 | GO:0006401: RNA catabolic process | 2.31E-04 |
| 16 | GO:0031053: primary miRNA processing | 2.31E-04 |
| 17 | GO:0009640: photomorphogenesis | 2.67E-04 |
| 18 | GO:0007018: microtubule-based movement | 4.09E-04 |
| 19 | GO:0030422: production of siRNA involved in RNA interference | 5.23E-04 |
| 20 | GO:0006366: transcription from RNA polymerase II promoter | 5.23E-04 |
| 21 | GO:0007155: cell adhesion | 5.23E-04 |
| 22 | GO:0048449: floral organ formation | 6.34E-04 |
| 23 | GO:0010093: specification of floral organ identity | 6.34E-04 |
| 24 | GO:0006302: double-strand break repair | 7.53E-04 |
| 25 | GO:0006342: chromatin silencing | 7.53E-04 |
| 26 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 7.53E-04 |
| 27 | GO:0045010: actin nucleation | 1.01E-03 |
| 28 | GO:0006284: base-excision repair | 1.01E-03 |
| 29 | GO:0016070: RNA metabolic process | 1.01E-03 |
| 30 | GO:0006259: DNA metabolic process | 1.01E-03 |
| 31 | GO:0016570: histone modification | 1.01E-03 |
| 32 | GO:0006974: cellular response to DNA damage stimulus | 1.15E-03 |
| 33 | GO:0016571: histone methylation | 1.29E-03 |
| 34 | GO:0010332: response to gamma radiation | 1.29E-03 |
| 35 | GO:0010389: regulation of G2/M transition of mitotic cell cycle | 1.29E-03 |
| 36 | GO:0016567: protein ubiquitination | 1.39E-03 |
| 37 | GO:0043687: post-translational protein modification | 1.44E-03 |
| 38 | GO:0006446: regulation of translational initiation | 1.59E-03 |
| 39 | GO:0001731: formation of translation preinitiation complex | 1.74E-03 |
| 40 | GO:0007062: sister chromatid cohesion | 1.74E-03 |
| 41 | GO:0000724: double-strand break repair via homologous recombination | 1.90E-03 |
| 42 | GO:0006310: DNA recombination | 2.06E-03 |
| 43 | GO:0035196: production of miRNAs involved in gene silencing by miRNA | 2.06E-03 |
| 44 | GO:0010090: trichome morphogenesis | 2.38E-03 |
| 45 | GO:0000278: mitotic cell cycle | 2.55E-03 |
| 46 | GO:0009793: embryo development ending in seed dormancy | 3.00E-03 |
| 47 | GO:0000394: RNA splicing, via endonucleolytic cleavage and ligation | 3.11E-03 |
| 48 | GO:0006275: regulation of DNA replication | 3.31E-03 |
| 49 | GO:0000226: microtubule cytoskeleton organization | 3.52E-03 |
| 50 | GO:0016579: protein deubiquitination | 3.93E-03 |
| 51 | GO:0009086: methionine biosynthetic process | 4.15E-03 |
| 52 | GO:0000911: cytokinesis by cell plate formation | 5.03E-03 |
| 53 | GO:0051567: histone H3-K9 methylation | 5.26E-03 |
| 54 | GO:0006306: DNA methylation | 5.74E-03 |
| 55 | GO:0000398: mRNA splicing, via spliceosome | 6.23E-03 |
| 56 | GO:0010228: vegetative to reproductive phase transition of meristem | 7.00E-03 |
| 57 | GO:0045893: positive regulation of transcription, DNA-templated | 9.48E-03 |
| 58 | GO:0006413: translational initiation | 1.16E-02 |
| 59 | GO:0009737: response to abscisic acid | 4.14E-02 |