co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G124975

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010165: response to X-ray	0.00E+00
2	GO:0019725: cellular homeostasis	0.00E+00
3	GO:0010288: response to lead ion	0.00E+00
4	GO:0042273: ribosomal large subunit biogenesis	0.00E+00
5	GO:0060148: positive regulation of posttranscriptional gene silencing	0.00E+00
6	GO:0006233: dTDP biosynthetic process	0.00E+00
7	GO:0045694: regulation of embryo sac egg cell differentiation	0.00E+00
8	GO:0016571: histone methylation	3.82E-05
9	GO:0010074: maintenance of meristem identity	2.88E-04
10	GO:0006378: mRNA polyadenylation	3.97E-04
11	GO:0007112: male meiosis cytokinesis	3.97E-04
12	GO:0006826: iron ion transport	4.86E-04
13	GO:0019915: lipid storage	7.38E-04
14	GO:0071577: zinc II ion transmembrane transport	9.31E-04
15	GO:0006406: mRNA export from nucleus	1.05E-03
16	GO:0010162: seed dormancy process	1.22E-03
17	GO:0050826: response to freezing	1.41E-03
18	GO:0010228: vegetative to reproductive phase transition of meristem	1.56E-03
19	GO:0007094: mitotic spindle assembly checkpoint	1.57E-03
20	GO:0045727: positive regulation of translation	1.57E-03
21	GO:0007032: endosome organization	1.57E-03
22	GO:0010182: sugar mediated signaling pathway	2.27E-03
23	GO:0035434: copper ion transmembrane transport	2.28E-03
24	GO:0042256: mature ribosome assembly	2.28E-03
25	GO:0034755: iron ion transmembrane transport	3.07E-03
26	GO:0046786: viral replication complex formation and maintenance	3.07E-03
27	GO:0009845: seed germination	3.07E-03
28	GO:0070084: protein initiator methionine removal	3.07E-03
29	GO:0009933: meristem structural organization	3.71E-03
30	GO:0000165: MAPK cascade	3.71E-03
31	GO:0006260: DNA replication	3.73E-03
32	GO:0006561: proline biosynthetic process	3.99E-03
33	GO:0051276: chromosome organization	3.99E-03
34	GO:0007005: mitochondrion organization	3.99E-03
35	GO:0016579: protein deubiquitination	4.77E-03
36	GO:0010025: wax biosynthetic process	4.97E-03
37	GO:0006367: transcription initiation from RNA polymerase II promoter	4.97E-03
38	GO:0009987: cellular process	4.97E-03
39	GO:0030422: production of siRNA involved in RNA interference	4.97E-03
40	GO:0009615: response to virus	6.02E-03
41	GO:0007031: peroxisome organization	6.02E-03
42	GO:0000741: karyogamy	6.02E-03
43	GO:0010311: lateral root formation	6.02E-03
44	GO:0010310: regulation of hydrogen peroxide metabolic process	6.02E-03
45	GO:0006302: double-strand break repair	7.15E-03
46	GO:0015977: carbon fixation	7.15E-03
47	GO:0016567: protein ubiquitination	7.62E-03
48	GO:0009640: photomorphogenesis	7.79E-03
49	GO:0009955: adaxial/abaxial pattern specification	8.34E-03
50	GO:0000398: mRNA splicing, via spliceosome	9.35E-03
51	GO:0010048: vernalization response	9.61E-03
52	GO:0009116: nucleoside metabolic process	9.61E-03
53	GO:0006312: mitotic recombination	9.61E-03
54	GO:0042732: D-xylose metabolic process	9.61E-03
55	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	1.09E-02
56	GO:0010389: regulation of G2/M transition of mitotic cell cycle	1.23E-02
57	GO:0006446: regulation of translational initiation	1.53E-02
58	GO:0016049: cell growth	1.68E-02
59	GO:0001731: formation of translation preinitiation complex	1.68E-02
60	GO:0007062: sister chromatid cohesion	1.68E-02
61	GO:0006261: DNA-dependent DNA replication	1.68E-02
62	GO:0045893: positive regulation of transcription, DNA-templated	1.71E-02
63	GO:0034968: histone lysine methylation	1.85E-02
64	GO:0000902: cell morphogenesis	1.85E-02
65	GO:0016126: sterol biosynthetic process	1.85E-02
66	GO:0000724: double-strand break repair via homologous recombination	1.85E-02
67	GO:0009793: embryo development ending in seed dormancy	2.08E-02
68	GO:0009909: regulation of flower development	2.11E-02
69	GO:0006612: protein targeting to membrane	2.19E-02
70	GO:0006413: translational initiation	2.29E-02
71	GO:0010363: regulation of plant-type hypersensitive response	2.37E-02
72	GO:0035304: regulation of protein dephosphorylation	2.37E-02
73	GO:0031348: negative regulation of defense response	2.55E-02
74	GO:0006888: ER to Golgi vesicle-mediated transport	2.55E-02
75	GO:0009867: jasmonic acid mediated signaling pathway	2.55E-02
76	GO:0009751: response to salicylic acid	2.74E-02
77	GO:0042254: ribosome biogenesis	2.93E-02
78	GO:0006633: fatty acid biosynthetic process	3.05E-02
79	GO:0006275: regulation of DNA replication	3.33E-02
80	GO:0009560: embryo sac egg cell differentiation	3.54E-02
81	GO:0048193: Golgi vesicle transport	3.75E-02
82	GO:0048366: leaf development	4.19E-02
83	GO:0009860: pollen tube growth	4.41E-02
84	GO:0009790: embryo development	4.41E-02
85	GO:0006099: tricarboxylic acid cycle	4.64E-02

Rank	GO Term	Adjusted P value
1	GO:0032791: lead ion binding	0.00E+00
2	GO:0004798: thymidylate kinase activity	0.00E+00
3	GO:0043022: ribosome binding	2.88E-04
4	GO:0043023: ribosomal large subunit binding	3.97E-04
5	GO:0000248: C-5 sterol desaturase activity	3.97E-04
6	GO:0035299: inositol pentakisphosphate 2-kinase activity	3.97E-04
7	GO:0004708: MAP kinase kinase activity	3.97E-04
8	GO:0019905: syntaxin binding	3.97E-04
9	GO:0003968: RNA-directed 5'-3' RNA polymerase activity	3.97E-04
10	GO:0070300: phosphatidic acid binding	3.97E-04
11	GO:0008430: selenium binding	9.31E-04
12	GO:0004350: glutamate-5-semialdehyde dehydrogenase activity	9.31E-04
13	GO:0005385: zinc ion transmembrane transporter activity	9.31E-04
14	GO:0004748: ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	1.57E-03
15	GO:0000062: fatty-acyl-CoA binding	1.57E-03
16	GO:0005375: copper ion transmembrane transporter activity	2.28E-03
17	GO:0008964: phosphoenolpyruvate carboxylase activity	2.28E-03
18	GO:0070006: metalloaminopeptidase activity	3.07E-03
19	GO:0005381: iron ion transmembrane transporter activity	3.07E-03
20	GO:0048040: UDP-glucuronate decarboxylase activity	3.07E-03
21	GO:0003713: transcription coactivator activity	3.99E-03
22	GO:0008235: metalloexopeptidase activity	3.99E-03
23	GO:0003729: mRNA binding	3.99E-03
24	GO:0003743: translation initiation factor activity	5.22E-03
25	GO:0019904: protein domain specific binding	6.02E-03
26	GO:0004177: aminopeptidase activity	8.34E-03
27	GO:0046873: metal ion transmembrane transporter activity	8.34E-03
28	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	9.56E-03
29	GO:0031418: L-ascorbic acid binding	9.61E-03
30	GO:0018024: histone-lysine N-methyltransferase activity	1.09E-02
31	GO:0016881: acid-amino acid ligase activity	1.42E-02
32	GO:0005506: iron ion binding	1.44E-02
33	GO:0016651: oxidoreductase activity, acting on NAD(P)H	1.68E-02
34	GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	2.01E-02
35	GO:0008137: NADH dehydrogenase (ubiquinone) activity	2.37E-02
36	GO:0042393: histone binding	2.74E-02
37	GO:0051539: 4 iron, 4 sulfur cluster binding	3.54E-02
38	GO:0008483: transaminase activity	3.54E-02
39	GO:0004497: monooxygenase activity	3.82E-02
40	GO:0010181: FMN binding	3.97E-02
41	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	3.97E-02

Rank	GO Term	Adjusted P value
1	GO:0035101: FACT complex	0.00E+00
2	GO:0005673: transcription factor TFIIE complex	0.00E+00
3	GO:0031307: integral component of mitochondrial outer membrane	3.97E-04
4	GO:0005719: nuclear euchromatin	3.97E-04
5	GO:0005849: mRNA cleavage factor complex	3.97E-04
6	GO:0005971: ribonucleoside-diphosphate reductase complex	1.57E-03
7	GO:0000808: origin recognition complex	1.57E-03
8	GO:0030915: Smc5-Smc6 complex	2.28E-03
9	GO:0000776: kinetochore	2.28E-03
10	GO:0005635: nuclear envelope	3.07E-03
11	GO:0005732: small nucleolar ribonucleoprotein complex	3.07E-03
12	GO:0005771: multivesicular body	3.99E-03
13	GO:0005801: cis-Golgi network	3.99E-03
14	GO:0009524: phragmoplast	4.77E-03
15	GO:0005681: spliceosomal complex	1.09E-02
16	GO:0005741: mitochondrial outer membrane	1.38E-02
17	GO:0033290: eukaryotic 48S preinitiation complex	1.68E-02
18	GO:0016282: eukaryotic 43S preinitiation complex	1.68E-02
19	GO:0005852: eukaryotic translation initiation factor 3 complex	1.85E-02
20	GO:0005654: nucleoplasm	2.01E-02
21	GO:0000139: Golgi membrane	3.97E-02
22	GO:0005694: chromosome	4.55E-02