co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G121543

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0043987: histone H3-S10 phosphorylation	0.00E+00
2	GO:0080120: CAAX-box protein maturation	0.00E+00
3	GO:0032465: regulation of cytokinesis	0.00E+00
4	GO:0043137: DNA replication, removal of RNA primer	0.00E+00
5	GO:0071586: CAAX-box protein processing	0.00E+00
6	GO:0006260: DNA replication	9.62E-10
7	GO:0007049: cell cycle	1.23E-09
8	GO:0016572: histone phosphorylation	1.30E-09
9	GO:0051301: cell division	1.64E-05
10	GO:0006265: DNA topological change	1.10E-04
11	GO:0009966: regulation of signal transduction	1.61E-04
12	GO:0045292: mRNA cis splicing, via spliceosome	4.56E-04
13	GO:0048574: long-day photoperiodism, flowering	4.56E-04
14	GO:0007059: chromosome segregation	4.56E-04
15	GO:0051028: mRNA transport	4.56E-04
16	GO:0042276: error-prone translesion synthesis	4.56E-04
17	GO:0000226: microtubule cytoskeleton organization	5.22E-04
18	GO:0006259: DNA metabolic process	7.38E-04
19	GO:0051726: regulation of cell cycle	8.03E-04
20	GO:0019915: lipid storage	8.99E-04
21	GO:0018279: protein N-linked glycosylation via asparagine	1.07E-03
22	GO:0000911: cytokinesis by cell plate formation	1.07E-03
23	GO:0009956: radial pattern formation	1.07E-03
24	GO:0009186: deoxyribonucleoside diphosphate metabolic process	1.07E-03
25	GO:0009755: hormone-mediated signaling pathway	1.07E-03
26	GO:0010389: regulation of G2/M transition of mitotic cell cycle	1.08E-03
27	GO:0010162: seed dormancy process	1.48E-03
28	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	1.48E-03
29	GO:0050826: response to freezing	1.70E-03
30	GO:0022904: respiratory electron transport chain	1.78E-03
31	GO:0008283: cell proliferation	1.85E-03
32	GO:0006281: DNA repair	1.89E-03
33	GO:0007018: microtubule-based movement	2.11E-03
34	GO:0031053: primary miRNA processing	2.58E-03
35	GO:0008654: phospholipid biosynthetic process	2.58E-03
36	GO:0008356: asymmetric cell division	2.58E-03
37	GO:0010182: sugar mediated signaling pathway	2.73E-03
38	GO:0009845: seed germination	3.74E-03
39	GO:0000394: RNA splicing, via endonucleolytic cleavage and ligation	4.11E-03
40	GO:0009933: meristem structural organization	4.51E-03
41	GO:0006275: regulation of DNA replication	4.51E-03
42	GO:0009909: regulation of flower development	4.56E-03
43	GO:0055072: iron ion homeostasis	5.67E-03
44	GO:0009934: regulation of meristem structural organization	5.67E-03
45	GO:0006084: acetyl-CoA metabolic process	5.67E-03
46	GO:0010583: response to cyclopentenone	5.67E-03
47	GO:0006366: transcription from RNA polymerase II promoter	5.67E-03
48	GO:0048366: leaf development	6.23E-03
49	GO:0009086: methionine biosynthetic process	6.23E-03
50	GO:0048449: floral organ formation	6.88E-03
51	GO:0010074: maintenance of meristem identity	6.88E-03
52	GO:0061025: membrane fusion	8.18E-03
53	GO:0006342: chromatin silencing	8.18E-03
54	GO:0090305: nucleic acid phosphodiester bond hydrolysis	8.18E-03
55	GO:0051567: histone H3-K9 methylation	8.86E-03
56	GO:0009640: photomorphogenesis	9.45E-03
57	GO:0009955: adaxial/abaxial pattern specification	9.55E-03
58	GO:0006306: DNA methylation	1.01E-02
59	GO:0012501: programmed cell death	1.10E-02
60	GO:0016070: RNA metabolic process	1.10E-02
61	GO:0016570: histone modification	1.10E-02
62	GO:0010048: vernalization response	1.10E-02
63	GO:0006284: base-excision repair	1.10E-02
64	GO:0006974: cellular response to DNA damage stimulus	1.25E-02
65	GO:0051225: spindle assembly	1.25E-02
66	GO:0032508: DNA duplex unwinding	1.41E-02
67	GO:0016571: histone methylation	1.41E-02
68	GO:0007034: vacuolar transport	1.41E-02
69	GO:0006487: protein N-linked glycosylation	1.58E-02
70	GO:0006406: mRNA export from nucleus	1.58E-02
71	GO:0006289: nucleotide-excision repair	1.58E-02
72	GO:0009607: response to biotic stimulus	1.58E-02
73	GO:0006446: regulation of translational initiation	1.75E-02
74	GO:0016049: cell growth	1.93E-02
75	GO:0001731: formation of translation preinitiation complex	1.93E-02
76	GO:0007062: sister chromatid cohesion	1.93E-02
77	GO:0006952: defense response	1.99E-02
78	GO:0000902: cell morphogenesis	2.12E-02
79	GO:0016126: sterol biosynthetic process	2.12E-02
80	GO:0006914: autophagy	2.12E-02
81	GO:0006396: RNA processing	2.17E-02
82	GO:0006310: DNA recombination	2.30E-02
83	GO:0008219: cell death	2.30E-02
84	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	2.51E-02
85	GO:0000278: mitotic cell cycle	2.92E-02
86	GO:0006270: DNA replication initiation	4.06E-02
87	GO:0048193: Golgi vesicle transport	4.30E-02
88	GO:0016579: protein deubiquitination	4.55E-02
89	GO:0016567: protein ubiquitination	4.62E-02

Rank	GO Term	Adjusted P value
1	GO:0035175: histone kinase activity (H3-S10 specific)	0.00E+00
2	GO:0008420: CTD phosphatase activity	0.00E+00
3	GO:0003881: CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity	0.00E+00
4	GO:0008409: 5'-3' exonuclease activity	0.00E+00
5	GO:0004748: ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	2.68E-05
6	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	6.06E-05
7	GO:0017108: 5'-flap endonuclease activity	4.56E-04
8	GO:0003916: DNA topoisomerase activity	4.56E-04
9	GO:0030337: DNA polymerase processivity factor activity	4.56E-04
10	GO:0000339: RNA cap binding	4.56E-04
11	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	4.56E-04
12	GO:0008017: microtubule binding	6.40E-04
13	GO:0019901: protein kinase binding	1.70E-03
14	GO:0016780: phosphotransferase activity, for other substituted phosphate groups	1.78E-03
15	GO:0070628: proteasome binding	1.78E-03
16	GO:0003777: microtubule motor activity	2.11E-03
17	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	3.52E-03
18	GO:0003713: transcription coactivator activity	4.57E-03
19	GO:0043130: ubiquitin binding	6.88E-03
20	GO:0043022: ribosome binding	6.88E-03
21	GO:0003678: DNA helicase activity	1.10E-02
22	GO:0005484: SNAP receptor activity	1.10E-02
23	GO:0008237: metallopeptidase activity	1.10E-02
24	GO:0003684: damaged DNA binding	1.10E-02
25	GO:0046914: transition metal ion binding	1.10E-02
26	GO:0004518: nuclease activity	1.10E-02
27	GO:0004519: endonuclease activity	1.41E-02
28	GO:0004527: exonuclease activity	1.75E-02
29	GO:0016651: oxidoreductase activity, acting on NAD(P)H	1.93E-02
30	GO:0004222: metalloendopeptidase activity	3.36E-02
31	GO:0004175: endopeptidase activity	3.36E-02
32	GO:0005524: ATP binding	3.42E-02
33	GO:0003677: DNA binding	3.91E-02
34	GO:0045735: nutrient reservoir activity	4.80E-02

Rank	GO Term	Adjusted P value
1	GO:0033095: aleurone grain	0.00E+00
2	GO:0000307: cyclin-dependent protein kinase holoenzyme complex	0.00E+00
3	GO:0005971: ribonucleoside-diphosphate reductase complex	2.68E-05
4	GO:0000775: chromosome, centromeric region	2.68E-05
5	GO:0005819: spindle	2.68E-04
6	GO:0043626: PCNA complex	4.56E-04
7	GO:0000815: ESCRT III complex	4.56E-04
8	GO:0005846: nuclear cap binding complex	4.56E-04
9	GO:0008250: oligosaccharyltransferase complex	1.07E-03
10	GO:0005871: kinesin complex	1.98E-03
11	GO:0031966: mitochondrial membrane	2.18E-03
12	GO:0005730: nucleolus	5.61E-03
13	GO:0012505: endomembrane system	5.67E-03
14	GO:0005875: microtubule associated complex	6.72E-03
15	GO:0016272: prefoldin complex	6.88E-03
16	GO:0005744: mitochondrial inner membrane presequence translocase complex	6.88E-03
17	GO:0016604: nuclear body	6.88E-03
18	GO:0005874: microtubule	6.99E-03
19	GO:0042555: MCM complex	8.18E-03
20	GO:0045271: respiratory chain complex I	1.13E-02
21	GO:0005694: chromosome	1.22E-02
22	GO:0005743: mitochondrial inner membrane	1.49E-02
23	GO:0033290: eukaryotic 48S preinitiation complex	1.93E-02
24	GO:0016282: eukaryotic 43S preinitiation complex	1.93E-02
25	GO:0005634: nucleus	1.96E-02
26	GO:0005852: eukaryotic translation initiation factor 3 complex	2.12E-02
27	GO:0009504: cell plate	2.12E-02
28	GO:0005654: nucleoplasm	2.30E-02
29	GO:0019013: viral nucleocapsid	2.71E-02
30	GO:0005635: nuclear envelope	3.36E-02
31	GO:0009524: phragmoplast	4.55E-02