co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G117771

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010157: response to chlorate	0.00E+00
2	GO:0090391: granum assembly	0.00E+00
3	GO:0046653: tetrahydrofolate metabolic process	0.00E+00
4	GO:0000372: Group I intron splicing	0.00E+00
5	GO:0010117: photoprotection	0.00E+00
6	GO:0030494: bacteriochlorophyll biosynthetic process	0.00E+00
7	GO:0006457: protein folding	6.94E-07
8	GO:0009658: chloroplast organization	9.18E-07
9	GO:1901671: positive regulation of superoxide dismutase activity	1.15E-05
10	GO:0045037: protein import into chloroplast stroma	9.03E-05
11	GO:0006353: DNA-templated transcription, termination	9.03E-05
12	GO:0042793: transcription from plastid promoter	1.14E-04
13	GO:0010468: regulation of gene expression	1.62E-04
14	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	3.21E-04
15	GO:0010206: photosystem II repair	3.71E-04
16	GO:0019538: protein metabolic process	3.71E-04
17	GO:0051512: positive regulation of unidimensional cell growth	5.78E-04
18	GO:0010587: miRNA catabolic process	5.78E-04
19	GO:0009968: negative regulation of signal transduction	5.78E-04
20	GO:0006591: ornithine metabolic process	5.78E-04
21	GO:0006788: heme oxidation	5.78E-04
22	GO:0043157: response to cation stress	5.78E-04
23	GO:0018160: peptidyl-pyrromethane cofactor linkage	5.78E-04
24	GO:0032543: mitochondrial translation	5.78E-04
25	GO:0080141: regulation of jasmonic acid biosynthetic process	5.78E-04
26	GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation	5.78E-04
27	GO:0009902: chloroplast relocation	7.34E-04
28	GO:0010027: thylakoid membrane organization	1.27E-03
29	GO:0010024: phytochromobilin biosynthetic process	1.34E-03
30	GO:0009102: biotin biosynthetic process	1.34E-03
31	GO:0009642: response to light intensity	1.34E-03
32	GO:0010380: regulation of chlorophyll biosynthetic process	1.34E-03
33	GO:0051555: flavonol biosynthetic process	1.34E-03
34	GO:0019481: L-alanine catabolic process, by transamination	1.34E-03
35	GO:0000304: response to singlet oxygen	2.23E-03
36	GO:0006450: regulation of translational fidelity	2.23E-03
37	GO:0009247: glycolipid biosynthetic process	2.23E-03
38	GO:0015867: ATP transport	2.23E-03
39	GO:0006508: proteolysis	2.96E-03
40	GO:0045038: protein import into chloroplast thylakoid membrane	3.26E-03
41	GO:0000373: Group II intron splicing	3.26E-03
42	GO:0030259: lipid glycosylation	3.26E-03
43	GO:0006790: sulfur compound metabolic process	3.26E-03
44	GO:0019375: galactolipid biosynthetic process	3.26E-03
45	GO:0006401: RNA catabolic process	3.26E-03
46	GO:0035304: regulation of protein dephosphorylation	3.86E-03
47	GO:0009089: lysine biosynthetic process via diaminopimelate	4.47E-03
48	GO:0006081: cellular aldehyde metabolic process	4.47E-03
49	GO:0009813: flavonoid biosynthetic process	4.47E-03
50	GO:0045893: positive regulation of transcription, DNA-templated	5.36E-03
51	GO:0031347: regulation of defense response	5.76E-03
52	GO:0006102: isocitrate metabolic process	5.76E-03
53	GO:0006749: glutathione metabolic process	5.76E-03
54	GO:0009408: response to heat	6.08E-03
55	GO:0009416: response to light stimulus	7.03E-03
56	GO:0033014: tetrapyrrole biosynthetic process	7.20E-03
57	GO:0006189: 'de novo' IMP biosynthetic process	7.20E-03
58	GO:0032880: regulation of protein localization	7.20E-03
59	GO:0009704: de-etiolation	7.20E-03
60	GO:0009058: biosynthetic process	7.36E-03
61	GO:0009628: response to abiotic stimulus	8.73E-03
62	GO:0051604: protein maturation	8.73E-03
63	GO:0019344: cysteine biosynthetic process	8.78E-03
64	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.04E-02
65	GO:0045087: innate immune response	1.04E-02
66	GO:0001666: response to hypoxia	1.04E-02
67	GO:0009407: toxin catabolic process	1.21E-02
68	GO:0000302: response to reactive oxygen species	1.21E-02
69	GO:0006184: obsolete GTP catabolic process	1.39E-02
70	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	1.59E-02
71	GO:0015995: chlorophyll biosynthetic process	1.78E-02
72	GO:0046854: phosphatidylinositol phosphorylation	1.79E-02
73	GO:0006655: phosphatidylglycerol biosynthetic process	2.00E-02
74	GO:0031408: oxylipin biosynthetic process	2.00E-02
75	GO:0051607: defense response to virus	2.00E-02
76	GO:0048316: seed development	2.00E-02
77	GO:0006364: rRNA processing	2.02E-02
78	GO:0010207: photosystem II assembly	2.55E-02
79	GO:0030154: cell differentiation	2.69E-02
80	GO:0010267: production of ta-siRNAs involved in RNA interference	2.93E-02
81	GO:0035196: production of miRNAs involved in gene silencing by miRNA	2.93E-02
82	GO:0044267: cellular protein metabolic process	2.93E-02
83	GO:0010155: regulation of proton transport	2.93E-02
84	GO:0009627: systemic acquired resistance	3.19E-02
85	GO:0046777: protein autophosphorylation	3.45E-02
86	GO:0071555: cell wall organization	3.45E-02
87	GO:0009695: jasmonic acid biosynthetic process	3.72E-02
88	GO:0009620: response to fungus	3.72E-02
89	GO:0009738: abscisic acid-activated signaling pathway	3.99E-02
90	GO:0009409: response to cold	4.30E-02
91	GO:0009853: photorespiration	4.56E-02
92	GO:0006098: pentose-phosphate shunt	4.66E-02
93	GO:0006520: cellular amino acid metabolic process	4.86E-02
94	GO:0006626: protein targeting to mitochondrion	4.86E-02
95	GO:0080167: response to karrikin	5.00E-02

Rank	GO Term	Adjusted P value
1	GO:0045431: flavonol synthase activity	0.00E+00
2	GO:0010285: L,L-diaminopimelate aminotransferase activity	0.00E+00
3	GO:0004076: biotin synthase activity	0.00E+00
4	GO:0046408: chlorophyll synthetase activity	0.00E+00
5	GO:0008864: formyltetrahydrofolate deformylase activity	0.00E+00
6	GO:0046577: long-chain-alcohol oxidase activity	0.00E+00
7	GO:0004252: serine-type endopeptidase activity	1.83E-05
8	GO:0000774: adenyl-nucleotide exchange factor activity	4.07E-05
9	GO:0051087: chaperone binding	5.06E-04
10	GO:0042803: protein homodimerization activity	5.21E-04
11	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	5.78E-04
12	GO:0035250: UDP-galactosyltransferase activity	5.78E-04
13	GO:0004362: glutathione-disulfide reductase activity	5.78E-04
14	GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity	5.78E-04
15	GO:0031177: phosphopantetheine binding	5.78E-04
16	GO:0008194: UDP-glycosyltransferase activity	5.78E-04
17	GO:0004585: ornithine carbamoyltransferase activity	5.78E-04
18	GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	5.78E-04
19	GO:0004418: hydroxymethylbilane synthase activity	5.78E-04
20	GO:0005507: copper ion binding	6.82E-04
21	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	8.43E-04
22	GO:0046914: transition metal ion binding	1.05E-03
23	GO:0016742: hydroxymethyl-, formyl- and related transferase activity	1.34E-03
24	GO:0019204: obsolete nucleotide phosphatase activity	1.34E-03
25	GO:0004450: isocitrate dehydrogenase (NADP+) activity	1.34E-03
26	GO:0005347: ATP transmembrane transporter activity	1.34E-03
27	GO:0004392: heme oxygenase (decyclizing) activity	1.34E-03
28	GO:0016743: carboxyl- or carbamoyltransferase activity	2.23E-03
29	GO:0004659: prenyltransferase activity	3.26E-03
30	GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity	3.26E-03
31	GO:0016668: oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor	3.26E-03
32	GO:0031072: heat shock protein binding	4.31E-03
33	GO:0008173: RNA methyltransferase activity	5.76E-03
34	GO:0016884: carbon-nitrogen ligase activity, with glutamine as amido-N-donor	7.20E-03
35	GO:0008266: poly(U) RNA binding	1.04E-02
36	GO:0051082: unfolded protein binding	1.23E-02
37	GO:0030170: pyridoxal phosphate binding	1.33E-02
38	GO:0003690: double-stranded DNA binding	1.59E-02
39	GO:0008233: peptidase activity	2.16E-02
40	GO:0004650: polygalacturonase activity	2.22E-02
41	GO:0016760: cellulose synthase (UDP-forming) activity	2.22E-02
42	GO:0016746: transferase activity, transferring acyl groups	2.43E-02
43	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.69E-02
44	GO:0016597: amino acid binding	4.56E-02
45	GO:0050660: flavin adenine dinucleotide binding	4.83E-02

Rank	GO Term	Adjusted P value
1	GO:0019867: outer membrane	0.00E+00
2	GO:0009526: plastid envelope	0.00E+00
3	GO:0042646: plastid nucleoid	0.00E+00
4	GO:0055035: plastid thylakoid membrane	0.00E+00
5	GO:0009941: chloroplast envelope	2.29E-15
6	GO:0009507: chloroplast	1.30E-14
7	GO:0009570: chloroplast stroma	3.12E-10
8	GO:0009532: plastid stroma	1.77E-07
9	GO:0009535: chloroplast thylakoid membrane	3.13E-06
10	GO:0009707: chloroplast outer membrane	1.62E-04
11	GO:0009840: chloroplastic endopeptidase Clp complex	1.62E-04
12	GO:0009536: plastid	5.40E-04
13	GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex	5.78E-04
14	GO:0080085: signal recognition particle, chloroplast targeting	5.78E-04
15	GO:0009533: chloroplast stromal thylakoid	1.34E-03
16	GO:0009579: thylakoid	1.43E-03
17	GO:0009534: chloroplast thylakoid	2.82E-03
18	GO:0009706: chloroplast inner membrane	5.25E-03
19	GO:0005759: mitochondrial matrix	6.31E-03
20	GO:0042651: thylakoid membrane	2.00E-02
21	GO:0005739: mitochondrion	4.49E-02