Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G113652

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006233: dTDP biosynthetic process0.00E+00
2GO:0010245: radial microtubular system formation0.00E+00
3GO:0010425: DNA methylation on cytosine within a CNG sequence0.00E+00
4GO:0016572: histone phosphorylation1.19E-06
5GO:0006342: chromatin silencing1.19E-06
6GO:0010069: zygote asymmetric cytokinesis in embryo sac1.25E-06
7GO:0045814: negative regulation of gene expression, epigenetic1.25E-06
8GO:0006260: DNA replication3.37E-06
9GO:0010389: regulation of G2/M transition of mitotic cell cycle5.24E-06
10GO:0090116: C-5 methylation of cytosine1.10E-05
11GO:0007018: microtubule-based movement1.89E-05
12GO:0006275: regulation of DNA replication6.05E-05
13GO:0007049: cell cycle7.93E-05
14GO:0042276: error-prone translesion synthesis1.67E-04
15GO:0007112: male meiosis cytokinesis1.67E-04
16GO:0051567: histone H3-K9 methylation1.72E-04
17GO:0006306: DNA methylation2.08E-04
18GO:0051301: cell division2.91E-04
19GO:0009294: DNA mediated transformation3.59E-04
20GO:0042547: cell wall modification involved in multidimensional cell growth4.07E-04
21GO:0009755: hormone-mediated signaling pathway4.07E-04
22GO:0043987: histone H3-S10 phosphorylation4.07E-04
23GO:0018279: protein N-linked glycosylation via asparagine4.07E-04
24GO:0009957: epidermal cell fate specification6.97E-04
25GO:0022904: respiratory electron transport chain6.97E-04
26GO:0009909: regulation of flower development7.65E-04
27GO:0009558: embryo sac cellularization1.04E-03
28GO:0032147: activation of protein kinase activity1.04E-03
29GO:0000226: microtubule cytoskeleton organization1.26E-03
30GO:0006265: DNA topological change1.40E-03
31GO:0060236: regulation of mitotic spindle organization1.40E-03
32GO:0048229: gametophyte development1.80E-03
33GO:0000911: cytokinesis by cell plate formation2.10E-03
34GO:0010583: response to cyclopentenone2.21E-03
35GO:0009934: regulation of meristem structural organization2.21E-03
36GO:0030245: cellulose catabolic process2.66E-03
37GO:0048449: floral organ formation2.66E-03
38GO:0010074: maintenance of meristem identity2.66E-03
39GO:0006259: DNA metabolic process4.24E-03
40GO:0016570: histone modification4.24E-03
41GO:0048453: sepal formation4.24E-03
42GO:0010048: vernalization response4.24E-03
43GO:0019915: lipid storage4.81E-03
44GO:0048451: petal formation4.81E-03
45GO:0016571: histone methylation5.40E-03
46GO:0048316: seed development6.03E-03
47GO:0006487: protein N-linked glycosylation6.03E-03
48GO:0006406: mRNA export from nucleus6.03E-03
49GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity6.69E-03
50GO:0010162: seed dormancy process6.69E-03
51GO:0050826: response to freezing7.37E-03
52GO:0007062: sister chromatid cohesion7.37E-03
53GO:0006310: DNA recombination8.79E-03
54GO:0000910: cytokinesis8.79E-03
55GO:0009966: regulation of signal transduction8.79E-03
56GO:0010182: sugar mediated signaling pathway1.03E-02
57GO:0009553: embryo sac development1.11E-02
58GO:0006281: DNA repair1.17E-02
59GO:0009845: seed germination1.27E-02
60GO:0031047: gene silencing by RNA1.36E-02
61GO:0009933: meristem structural organization1.44E-02
62GO:0006270: DNA replication initiation1.53E-02
63GO:0016579: protein deubiquitination1.72E-02
64GO:0051726: regulation of cell cycle1.91E-02
65GO:0009640: photomorphogenesis2.42E-02
66GO:0008283: cell proliferation2.98E-02
67GO:0010228: vegetative to reproductive phase transition of meristem3.10E-02
68GO:0009555: pollen development3.83E-02
69GO:0045893: positive regulation of transcription, DNA-templated4.22E-02
RankGO TermAdjusted P value
1GO:0004798: thymidylate kinase activity0.00E+00
2GO:0003886: DNA (cytosine-5-)-methyltransferase activity1.10E-05
3GO:0003777: microtubule motor activity1.89E-05
4GO:0008017: microtubule binding5.35E-05
5GO:0030337: DNA polymerase processivity factor activity1.67E-04
6GO:0004693: cyclin-dependent protein serine/threonine kinase activity1.67E-04
7GO:0003916: DNA topoisomerase activity1.67E-04
8GO:0035175: histone kinase activity (H3-S10 specific)4.07E-04
9GO:0004748: ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor6.97E-04
10GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity1.04E-03
11GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity1.40E-03
12GO:0008810: cellulase activity2.21E-03
13GO:0019901: protein kinase binding7.37E-03
14GO:0016651: oxidoreductase activity, acting on NAD(P)H7.37E-03
15GO:0005524: ATP binding1.75E-02
16GO:0003677: DNA binding3.29E-02
17GO:0004721: phosphoprotein phosphatase activity3.70E-02
18GO:0008168: methyltransferase activity3.74E-02
19GO:0003682: chromatin binding4.75E-02
RankGO TermAdjusted P value
1GO:0000307: cyclin-dependent protein kinase holoenzyme complex0.00E+00
2GO:0005871: kinesin complex1.69E-05
3GO:0005875: microtubule associated complex1.14E-04
4GO:0005874: microtubule1.19E-04
5GO:0043626: PCNA complex1.67E-04
6GO:0008250: oligosaccharyltransferase complex4.07E-04
7GO:0005971: ribonucleoside-diphosphate reductase complex6.97E-04
8GO:0000808: origin recognition complex6.97E-04
9GO:0005819: spindle7.76E-04
10GO:0005654: nucleoplasm8.79E-03
11GO:0031966: mitochondrial membrane8.79E-03
12GO:0005635: nuclear envelope1.27E-02
13GO:0045271: respiratory chain complex I2.75E-02
14GO:0005634: nucleus2.96E-02
15GO:0005743: mitochondrial inner membrane3.34E-02