Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G109526

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0035436: triose phosphate transmembrane transport0.00E+00
2GO:0015714: phosphoenolpyruvate transport0.00E+00
3GO:0042794: rRNA transcription from plastid promoter0.00E+00
4GO:0089722: phosphoenolpyruvate transmembrane transport0.00E+00
5GO:0042793: transcription from plastid promoter3.01E-06
6GO:0015979: photosynthesis3.03E-06
7GO:0007186: G-protein coupled receptor signaling pathway4.32E-05
8GO:0045038: protein import into chloroplast thylakoid membrane6.78E-05
9GO:0045037: protein import into chloroplast stroma6.78E-05
10GO:0008380: RNA splicing3.29E-04
11GO:0009765: photosynthesis, light harvesting3.76E-04
12GO:0006655: phosphatidylglycerol biosynthetic process4.75E-04
13GO:0018298: protein-chromophore linkage6.90E-04
14GO:0006417: regulation of translation6.90E-04
15GO:0035304: regulation of protein dephosphorylation8.11E-04
16GO:0009773: photosynthetic electron transport in photosystem I8.11E-04
17GO:0010182: sugar mediated signaling pathway8.11E-04
18GO:0032502: developmental process8.72E-04
19GO:0009902: chloroplast relocation1.14E-03
20GO:0009073: aromatic amino acid family biosynthetic process1.34E-03
21GO:0009790: embryo development1.48E-03
22GO:0010207: photosystem II assembly2.83E-03
23GO:0045893: positive regulation of transcription, DNA-templated3.11E-03
24GO:0044237: cellular metabolic process3.21E-03
25GO:0010027: thylakoid membrane organization3.61E-03
26GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway4.34E-03
27GO:0006364: rRNA processing6.38E-03
28GO:0009793: embryo development ending in seed dormancy9.42E-03
29GO:0042742: defense response to bacterium1.30E-02
RankGO TermAdjusted P value
1GO:0015121: phosphoenolpyruvate:phosphate antiporter activity0.00E+00
2GO:0009670: triose-phosphate:phosphate antiporter activity0.00E+00
3GO:0003849: 3-deoxy-7-phosphoheptulonate synthase activity2.30E-05
4GO:0003690: double-stranded DNA binding3.76E-04
5GO:0016168: chlorophyll binding6.90E-04
6GO:0050662: coenzyme binding4.77E-03
7GO:0005215: transporter activity1.24E-02
RankGO TermAdjusted P value
1GO:0009527: plastid outer membrane8.30E-06
2GO:0009522: photosystem I8.30E-06
3GO:0009528: plastid inner membrane8.30E-06
4GO:0009523: photosystem II1.91E-05
5GO:0009538: photosystem I reaction center6.78E-05
6GO:0009532: plastid stroma2.01E-04
7GO:0009941: chloroplast envelope5.29E-04
8GO:0009507: chloroplast5.71E-04
9GO:0009536: plastid1.07E-03
10GO:0010319: stromule1.56E-03
11GO:0009535: chloroplast thylakoid membrane1.82E-03
12GO:0010287: plastoglobule2.24E-03
13GO:0009579: thylakoid1.26E-02
14GO:0005739: mitochondrion2.99E-02
15GO:0016020: membrane3.32E-02
16GO:0009570: chloroplast stroma4.84E-02