| Rank | GO Term | Adjusted P value |
|---|
| 1 | GO:0031118: rRNA pseudouridine synthesis | 0.00E+00 |
| 2 | GO:0006696: ergosterol biosynthetic process | 0.00E+00 |
| 3 | GO:0009909: regulation of flower development | 8.47E-06 |
| 4 | GO:0048574: long-day photoperiodism, flowering | 8.01E-05 |
| 5 | GO:0001522: pseudouridine synthesis | 8.50E-05 |
| 6 | GO:0031048: chromatin silencing by small RNA | 1.03E-04 |
| 7 | GO:0034968: histone lysine methylation | 1.68E-04 |
| 8 | GO:0006346: methylation-dependent chromatin silencing | 2.82E-04 |
| 9 | GO:0009845: seed germination | 3.50E-04 |
| 10 | GO:0090351: seedling development | 3.55E-04 |
| 11 | GO:0010638: positive regulation of organelle organization | 3.55E-04 |
| 12 | GO:0048235: pollen sperm cell differentiation | 3.55E-04 |
| 13 | GO:0007094: mitotic spindle assembly checkpoint | 3.55E-04 |
| 14 | GO:0001510: RNA methylation | 4.65E-04 |
| 15 | GO:0033044: regulation of chromosome organization | 7.23E-04 |
| 16 | GO:0051567: histone H3-K9 methylation | 8.57E-04 |
| 17 | GO:0010050: vegetative phase change | 9.36E-04 |
| 18 | GO:0007267: cell-cell signaling | 9.36E-04 |
| 19 | GO:0006306: DNA methylation | 9.74E-04 |
| 20 | GO:0008283: cell proliferation | 1.23E-03 |
| 21 | GO:0051301: cell division | 1.23E-03 |
| 22 | GO:0010073: meristem maintenance | 1.41E-03 |
| 23 | GO:0048449: floral organ formation | 1.41E-03 |
| 24 | GO:0010311: lateral root formation | 1.41E-03 |
| 25 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 1.67E-03 |
| 26 | GO:0016572: histone phosphorylation | 1.67E-03 |
| 27 | GO:0009451: RNA modification | 1.93E-03 |
| 28 | GO:0006338: chromatin remodeling | 1.93E-03 |
| 29 | GO:0006396: RNA processing | 2.08E-03 |
| 30 | GO:0048453: sepal formation | 2.20E-03 |
| 31 | GO:0006312: mitotic recombination | 2.20E-03 |
| 32 | GO:0009616: virus induced gene silencing | 2.20E-03 |
| 33 | GO:0019915: lipid storage | 2.48E-03 |
| 34 | GO:0048451: petal formation | 2.48E-03 |
| 35 | GO:0009165: nucleotide biosynthetic process | 2.78E-03 |
| 36 | GO:0010389: regulation of G2/M transition of mitotic cell cycle | 2.78E-03 |
| 37 | GO:0008033: tRNA processing | 3.10E-03 |
| 38 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 3.44E-03 |
| 39 | GO:0010014: meristem initiation | 3.44E-03 |
| 40 | GO:0007131: reciprocal meiotic recombination | 3.44E-03 |
| 41 | GO:0010197: polar nucleus fusion | 3.44E-03 |
| 42 | GO:0010162: seed dormancy process | 3.44E-03 |
| 43 | GO:0009855: determination of bilateral symmetry | 3.44E-03 |
| 44 | GO:0050826: response to freezing | 3.79E-03 |
| 45 | GO:0030154: cell differentiation | 4.15E-03 |
| 46 | GO:0006281: DNA repair | 4.44E-03 |
| 47 | GO:0010267: production of ta-siRNAs involved in RNA interference | 4.53E-03 |
| 48 | GO:0035196: production of miRNAs involved in gene silencing by miRNA | 4.53E-03 |
| 49 | GO:0010182: sugar mediated signaling pathway | 5.27E-03 |
| 50 | GO:0010090: trichome morphogenesis | 5.27E-03 |
| 51 | GO:0006869: lipid transport | 5.67E-03 |
| 52 | GO:0042254: ribosome biogenesis | 6.51E-03 |
| 53 | GO:0000394: RNA splicing, via endonucleolytic cleavage and ligation | 6.94E-03 |
| 54 | GO:0000413: protein peptidyl-prolyl isomerization | 7.39E-03 |
| 55 | GO:0006275: regulation of DNA replication | 7.39E-03 |
| 56 | GO:0000226: microtubule cytoskeleton organization | 7.83E-03 |
| 57 | GO:0006270: DNA replication initiation | 7.83E-03 |
| 58 | GO:0009560: embryo sac egg cell differentiation | 7.83E-03 |
| 59 | GO:0007049: cell cycle | 8.29E-03 |
| 60 | GO:0009086: methionine biosynthetic process | 9.24E-03 |
| 61 | GO:0051726: regulation of cell cycle | 9.73E-03 |
| 62 | GO:0000911: cytokinesis by cell plate formation | 1.13E-02 |
| 63 | GO:0009640: photomorphogenesis | 1.23E-02 |
| 64 | GO:0006414: translational elongation | 1.34E-02 |
| 65 | GO:0000398: mRNA splicing, via spliceosome | 1.40E-02 |
| 66 | GO:0006952: defense response | 2.07E-02 |
| 67 | GO:0006334: nucleosome assembly | 3.69E-02 |
| 68 | GO:0016567: protein ubiquitination | 3.77E-02 |