co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G106690

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042273: ribosomal large subunit biogenesis	0.00E+00
2	GO:0043137: DNA replication, removal of RNA primer	0.00E+00
3	GO:0006233: dTDP biosynthetic process	0.00E+00
4	GO:0045694: regulation of embryo sac egg cell differentiation	0.00E+00
5	GO:0010288: response to lead ion	0.00E+00
6	GO:0010074: maintenance of meristem identity	2.13E-04
7	GO:1990426: mitotic recombination-dependent replication fork processing	3.27E-04
8	GO:0006378: mRNA polyadenylation	3.27E-04
9	GO:0007112: male meiosis cytokinesis	3.27E-04
10	GO:0006260: DNA replication	3.60E-04
11	GO:0019915: lipid storage	5.56E-04
12	GO:0016571: histone methylation	6.67E-04
13	GO:0010389: regulation of G2/M transition of mitotic cell cycle	6.67E-04
14	GO:0009755: hormone-mediated signaling pathway	7.69E-04
15	GO:0034389: lipid particle organization	7.69E-04
16	GO:0030643: cellular phosphate ion homeostasis	7.69E-04
17	GO:0010109: regulation of photosynthesis	7.69E-04
18	GO:0006406: mRNA export from nucleus	7.91E-04
19	GO:0000398: mRNA splicing, via spliceosome	8.70E-04
20	GO:0010162: seed dormancy process	9.26E-04
21	GO:0050826: response to freezing	1.07E-03
22	GO:0010152: pollen maturation	1.31E-03
23	GO:0045727: positive regulation of translation	1.31E-03
24	GO:0010182: sugar mediated signaling pathway	1.75E-03
25	GO:0042256: mature ribosome assembly	1.91E-03
26	GO:0008654: phospholipid biosynthetic process	1.91E-03
27	GO:0035434: copper ion transmembrane transport	1.91E-03
28	GO:0009845: seed germination	2.34E-03
29	GO:0070084: protein initiator methionine removal	2.55E-03
30	GO:0006825: copper ion transport	2.55E-03
31	GO:0009933: meristem structural organization	2.80E-03
32	GO:0016579: protein deubiquitination	3.61E-03
33	GO:0009987: cellular process	4.12E-03
34	GO:0009934: regulation of meristem structural organization	4.12E-03
35	GO:0000741: karyogamy	4.98E-03
36	GO:0010311: lateral root formation	4.98E-03
37	GO:0016567: protein ubiquitination	5.35E-03
38	GO:0006281: DNA repair	5.35E-03
39	GO:0090305: nucleic acid phosphodiester bond hydrolysis	5.91E-03
40	GO:0016572: histone phosphorylation	5.91E-03
41	GO:0006302: double-strand break repair	5.91E-03
42	GO:0009640: photomorphogenesis	5.91E-03
43	GO:0006259: DNA metabolic process	7.93E-03
44	GO:0010048: vernalization response	7.93E-03
45	GO:0006284: base-excision repair	7.93E-03
46	GO:0006312: mitotic recombination	7.93E-03
47	GO:0010228: vegetative to reproductive phase transition of meristem	8.39E-03
48	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	9.03E-03
49	GO:0006974: cellular response to DNA damage stimulus	9.03E-03
50	GO:0010332: response to gamma radiation	1.02E-02
51	GO:0007033: vacuole organization	1.02E-02
52	GO:0009266: response to temperature stimulus	1.02E-02
53	GO:0051607: defense response to virus	1.14E-02
54	GO:0007030: Golgi organization	1.26E-02
55	GO:0006446: regulation of translational initiation	1.26E-02
56	GO:0045893: positive regulation of transcription, DNA-templated	1.30E-02
57	GO:0001731: formation of translation preinitiation complex	1.39E-02
58	GO:0006833: water transport	1.39E-02
59	GO:0006972: hyperosmotic response	1.39E-02
60	GO:0009793: embryo development ending in seed dormancy	1.47E-02
61	GO:0006914: autophagy	1.52E-02
62	GO:0009749: response to glucose	1.52E-02
63	GO:0016126: sterol biosynthetic process	1.52E-02
64	GO:0000724: double-strand break repair via homologous recombination	1.52E-02
65	GO:0009909: regulation of flower development	1.61E-02
66	GO:0006310: DNA recombination	1.66E-02
67	GO:0006413: translational initiation	1.74E-02
68	GO:0009553: embryo sac development	2.10E-02
69	GO:0042254: ribosome biogenesis	2.41E-02
70	GO:0000394: RNA splicing, via endonucleolytic cleavage and ligation	2.58E-02
71	GO:0000165: MAPK cascade	2.74E-02
72	GO:0000413: protein peptidyl-prolyl isomerization	2.74E-02
73	GO:0006275: regulation of DNA replication	2.74E-02
74	GO:0009560: embryo sac egg cell differentiation	2.91E-02
75	GO:0007049: cell cycle	3.09E-02
76	GO:0006096: glycolytic process	3.18E-02
77	GO:0009086: methionine biosynthetic process	3.45E-02
78	GO:0006099: tricarboxylic acid cycle	3.82E-02
79	GO:0016311: dephosphorylation	4.82E-02

Rank	GO Term	Adjusted P value
1	GO:0035299: inositol pentakisphosphate 2-kinase activity	0.00E+00
2	GO:0003881: CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity	0.00E+00
3	GO:0008409: 5'-3' exonuclease activity	0.00E+00
4	GO:0032942: inositol tetrakisphosphate 2-kinase activity	0.00E+00
5	GO:0032791: lead ion binding	0.00E+00
6	GO:0004798: thymidylate kinase activity	0.00E+00
7	GO:0008420: CTD phosphatase activity	0.00E+00
8	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	1.03E-04
9	GO:0043022: ribosome binding	2.13E-04
10	GO:0004708: MAP kinase kinase activity	3.27E-04
11	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	3.27E-04
12	GO:0070300: phosphatidic acid binding	3.27E-04
13	GO:0043023: ribosomal large subunit binding	3.27E-04
14	GO:0000248: C-5 sterol desaturase activity	3.27E-04
15	GO:0017108: 5'-flap endonuclease activity	3.27E-04
16	GO:0000150: recombinase activity	3.27E-04
17	GO:0004128: cytochrome-b5 reductase activity, acting on NAD(P)H	7.69E-04
18	GO:0016780: phosphotransferase activity, for other substituted phosphate groups	1.31E-03
19	GO:0000062: fatty-acyl-CoA binding	1.31E-03
20	GO:0032549: ribonucleoside binding	1.31E-03
21	GO:0005375: copper ion transmembrane transporter activity	1.91E-03
22	GO:0070006: metalloaminopeptidase activity	2.55E-03
23	GO:0008235: metalloexopeptidase activity	3.29E-03
24	GO:0003729: mRNA binding	3.29E-03
25	GO:0008094: DNA-dependent ATPase activity	4.98E-03
26	GO:0004177: aminopeptidase activity	6.89E-03
27	GO:0004518: nuclease activity	7.93E-03
28	GO:0030955: potassium ion binding	7.93E-03
29	GO:0004743: pyruvate kinase activity	7.93E-03
30	GO:0003684: damaged DNA binding	7.93E-03
31	GO:0031418: L-ascorbic acid binding	7.93E-03
32	GO:0003697: single-stranded DNA binding	9.03E-03
33	GO:0003690: double-stranded DNA binding	9.03E-03
34	GO:0004519: endonuclease activity	1.02E-02
35	GO:0004527: exonuclease activity	1.26E-02
36	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	1.39E-02
37	GO:0003723: RNA binding	1.53E-02
38	GO:0019829: cation-transporting ATPase activity	1.66E-02
39	GO:0003743: translation initiation factor activity	2.17E-02
40	GO:0008483: transaminase activity	2.91E-02
41	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.09E-02
42	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	3.27E-02
43	GO:0000287: magnesium ion binding	3.66E-02
44	GO:0003676: nucleic acid binding	4.16E-02
45	GO:0016791: phosphatase activity	4.61E-02

Rank	GO Term	Adjusted P value
1	GO:0000307: cyclin-dependent protein kinase holoenzyme complex	0.00E+00
2	GO:0000418: DNA-directed RNA polymerase IV complex	1.52E-04
3	GO:0005665: DNA-directed RNA polymerase II, core complex	2.13E-04
4	GO:0005849: mRNA cleavage factor complex	3.27E-04
5	GO:0005681: spliceosomal complex	5.56E-04
6	GO:0000775: chromosome, centromeric region	1.31E-03
7	GO:0005654: nucleoplasm	1.39E-03
8	GO:0005732: small nucleolar ribonucleoprotein complex	2.55E-03
9	GO:0016272: prefoldin complex	4.98E-03
10	GO:0005744: mitochondrial inner membrane presequence translocase complex	4.98E-03
11	GO:0005758: mitochondrial intermembrane space	1.02E-02
12	GO:0016282: eukaryotic 43S preinitiation complex	1.39E-02
13	GO:0033290: eukaryotic 48S preinitiation complex	1.39E-02
14	GO:0005852: eukaryotic translation initiation factor 3 complex	1.52E-02
15	GO:0031966: mitochondrial membrane	1.66E-02
16	GO:0005635: nuclear envelope	2.41E-02
17	GO:0009524: phragmoplast	3.27E-02
18	GO:0005783: endoplasmic reticulum	3.48E-02
19	GO:0005730: nucleolus	4.54E-02