co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G103740

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0043137: DNA replication, removal of RNA primer	0.00E+00
2	GO:0045694: regulation of embryo sac egg cell differentiation	0.00E+00
3	GO:0019915: lipid storage	2.68E-06
4	GO:0010162: seed dormancy process	6.45E-06
5	GO:0050826: response to freezing	8.27E-06
6	GO:0010182: sugar mediated signaling pathway	1.93E-05
7	GO:0009845: seed germination	3.22E-05
8	GO:0009933: meristem structural organization	4.36E-05
9	GO:0010074: maintenance of meristem identity	5.91E-05
10	GO:0006259: DNA metabolic process	1.34E-04
11	GO:0009640: photomorphogenesis	1.39E-04
12	GO:0051028: mRNA transport	1.43E-04
13	GO:1990426: mitotic recombination-dependent replication fork processing	1.43E-04
14	GO:0045292: mRNA cis splicing, via spliceosome	1.43E-04
15	GO:0006378: mRNA polyadenylation	1.43E-04
16	GO:0048574: long-day photoperiodism, flowering	1.43E-04
17	GO:0016571: histone methylation	2.04E-04
18	GO:0010332: response to gamma radiation	2.04E-04
19	GO:0006406: mRNA export from nucleus	2.44E-04
20	GO:0009755: hormone-mediated signaling pathway	3.52E-04
21	GO:0009909: regulation of flower development	5.79E-04
22	GO:0001558: regulation of cell growth	6.05E-04
23	GO:0006471: protein ADP-ribosylation	6.05E-04
24	GO:0006260: DNA replication	6.13E-04
25	GO:0031053: primary miRNA processing	8.95E-04
26	GO:0007049: cell cycle	1.11E-03
27	GO:0016579: protein deubiquitination	1.21E-03
28	GO:0070084: protein initiator methionine removal	1.22E-03
29	GO:0006265: DNA topological change	1.22E-03
30	GO:0016567: protein ubiquitination	1.28E-03
31	GO:0006281: DNA repair	1.28E-03
32	GO:0006366: transcription from RNA polymerase II promoter	1.94E-03
33	GO:0009987: cellular process	1.94E-03
34	GO:0009934: regulation of meristem structural organization	1.94E-03
35	GO:0000398: mRNA splicing, via spliceosome	2.32E-03
36	GO:0000741: karyogamy	2.32E-03
37	GO:0051301: cell division	2.59E-03
38	GO:0010228: vegetative to reproductive phase transition of meristem	2.73E-03
39	GO:0090305: nucleic acid phosphodiester bond hydrolysis	2.73E-03
40	GO:0016572: histone phosphorylation	2.73E-03
41	GO:0006302: double-strand break repair	2.73E-03
42	GO:0006342: chromatin silencing	2.73E-03
43	GO:0009793: embryo development ending in seed dormancy	3.51E-03
44	GO:0010048: vernalization response	3.68E-03
45	GO:0006284: base-excision repair	3.68E-03
46	GO:0006312: mitotic recombination	3.68E-03
47	GO:0016070: RNA metabolic process	3.68E-03
48	GO:0006974: cellular response to DNA damage stimulus	4.18E-03
49	GO:0045893: positive regulation of transcription, DNA-templated	4.26E-03
50	GO:0010389: regulation of G2/M transition of mitotic cell cycle	4.70E-03
51	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	5.80E-03
52	GO:0006446: regulation of translational initiation	5.80E-03
53	GO:0001731: formation of translation preinitiation complex	6.38E-03
54	GO:0007062: sister chromatid cohesion	6.38E-03
55	GO:0006914: autophagy	7.00E-03
56	GO:0000724: double-strand break repair via homologous recombination	7.00E-03
57	GO:0006310: DNA recombination	7.62E-03
58	GO:0006888: ER to Golgi vesicle-mediated transport	9.61E-03
59	GO:0000394: RNA splicing, via endonucleolytic cleavage and ligation	1.18E-02
60	GO:0000226: microtubule cytoskeleton organization	1.33E-02
61	GO:0009560: embryo sac egg cell differentiation	1.33E-02
62	GO:0009086: methionine biosynthetic process	1.57E-02
63	GO:0051726: regulation of cell cycle	1.65E-02
64	GO:0006950: response to stress	1.68E-02
65	GO:0000911: cytokinesis by cell plate formation	1.92E-02
66	GO:0051567: histone H3-K9 methylation	2.01E-02
67	GO:0006306: DNA methylation	2.19E-02
68	GO:0016311: dephosphorylation	2.19E-02
69	GO:0006396: RNA processing	3.76E-02
70	GO:0006413: translational initiation	4.48E-02

Rank	GO Term	Adjusted P value
1	GO:0008409: 5'-3' exonuclease activity	0.00E+00
2	GO:0008420: CTD phosphatase activity	0.00E+00
3	GO:0035299: inositol pentakisphosphate 2-kinase activity	1.43E-04
4	GO:0000339: RNA cap binding	1.43E-04
5	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	1.43E-04
6	GO:0031625: ubiquitin protein ligase binding	1.43E-04
7	GO:0017108: 5'-flap endonuclease activity	1.43E-04
8	GO:0000150: recombinase activity	1.43E-04
9	GO:0003916: DNA topoisomerase activity	1.43E-04
10	GO:0004748: ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	6.05E-04
11	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	8.95E-04
12	GO:0070006: metalloaminopeptidase activity	1.22E-03
13	GO:0008235: metalloexopeptidase activity	1.57E-03
14	GO:0003729: mRNA binding	1.57E-03
15	GO:0003950: NAD+ ADP-ribosyltransferase activity	1.94E-03
16	GO:0008094: DNA-dependent ATPase activity	2.32E-03
17	GO:0043022: ribosome binding	2.32E-03
18	GO:0004177: aminopeptidase activity	3.19E-03
19	GO:0004518: nuclease activity	3.68E-03
20	GO:0003684: damaged DNA binding	3.68E-03
21	GO:0003697: single-stranded DNA binding	4.18E-03
22	GO:0003690: double-stranded DNA binding	4.18E-03
23	GO:0004519: endonuclease activity	4.70E-03
24	GO:0004527: exonuclease activity	5.80E-03
25	GO:0019901: protein kinase binding	6.38E-03
26	GO:0003723: RNA binding	8.81E-03
27	GO:0016791: phosphatase activity	2.10E-02
28	GO:0003676: nucleic acid binding	3.39E-02
29	GO:0016788: hydrolase activity, acting on ester bonds	4.48E-02
30	GO:0005488: binding	4.87E-02

Rank	GO Term	Adjusted P value
1	GO:0000307: cyclin-dependent protein kinase holoenzyme complex	0.00E+00
2	GO:0005849: mRNA cleavage factor complex	1.43E-04
3	GO:0005846: nuclear cap binding complex	1.43E-04
4	GO:0031461: cullin-RING ubiquitin ligase complex	1.43E-04
5	GO:0005681: spliceosomal complex	1.67E-04
6	GO:0000775: chromosome, centromeric region	6.05E-04
7	GO:0005971: ribonucleoside-diphosphate reductase complex	6.05E-04
8	GO:0005801: cis-Golgi network	1.57E-03
9	GO:0005744: mitochondrial inner membrane presequence translocase complex	2.32E-03
10	GO:0016282: eukaryotic 43S preinitiation complex	6.38E-03
11	GO:0033290: eukaryotic 48S preinitiation complex	6.38E-03
12	GO:0005634: nucleus	6.89E-03
13	GO:0005852: eukaryotic translation initiation factor 3 complex	7.00E-03
14	GO:0005654: nucleoplasm	7.62E-03
15	GO:0005635: nuclear envelope	1.10E-02
16	GO:0005694: chromosome	1.14E-02
17	GO:0005743: mitochondrial inner membrane	2.89E-02