co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G100639

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010424: DNA methylation on cytosine within a CG sequence	0.00E+00
2	GO:0031508: pericentric heterochromatin assembly	0.00E+00
3	GO:0006268: DNA unwinding involved in DNA replication	0.00E+00
4	GO:0032776: DNA methylation on cytosine	0.00E+00
5	GO:0006260: DNA replication	7.11E-15
6	GO:0032508: DNA duplex unwinding	1.52E-09
7	GO:0006270: DNA replication initiation	2.33E-09
8	GO:0010069: zygote asymmetric cytokinesis in embryo sac	2.35E-06
9	GO:0009186: deoxyribonucleoside diphosphate metabolic process	2.35E-06
10	GO:0007049: cell cycle	6.55E-06
11	GO:0051726: regulation of cell cycle	1.08E-05
12	GO:0090116: C-5 methylation of cytosine	2.03E-05
13	GO:0006306: DNA methylation	2.52E-05
14	GO:0051301: cell division	4.05E-05
15	GO:0006275: regulation of DNA replication	1.28E-04
16	GO:0016572: histone phosphorylation	1.77E-04
17	GO:0006342: chromatin silencing	1.77E-04
18	GO:0042276: error-prone translesion synthesis	2.40E-04
19	GO:0009971: anastral spindle assembly involved in male meiosis	2.40E-04
20	GO:0010216: maintenance of DNA methylation	2.40E-04
21	GO:0010425: DNA methylation on cytosine within a CNG sequence	2.40E-04
22	GO:0012501: programmed cell death	2.89E-04
23	GO:0051567: histone H3-K9 methylation	3.47E-04
24	GO:0010389: regulation of G2/M transition of mitotic cell cycle	4.28E-04
25	GO:0008283: cell proliferation	5.69E-04
26	GO:0009956: radial pattern formation	5.71E-04
27	GO:0009755: hormone-mediated signaling pathway	5.71E-04
28	GO:0043987: histone H3-S10 phosphorylation	5.71E-04
29	GO:0045814: negative regulation of gene expression, epigenetic	5.71E-04
30	GO:0009294: DNA mediated transformation	5.95E-04
31	GO:0006310: DNA recombination	8.99E-04
32	GO:0009957: epidermal cell fate specification	9.74E-04
33	GO:0022904: respiratory electron transport chain	9.74E-04
34	GO:0008356: asymmetric cell division	1.43E-03
35	GO:0032147: activation of protein kinase activity	1.43E-03
36	GO:0006265: DNA topological change	1.93E-03
37	GO:0010082: regulation of root meristem growth	1.93E-03
38	GO:0060236: regulation of mitotic spindle organization	1.93E-03
39	GO:0032875: regulation of DNA endoreduplication	1.93E-03
40	GO:0000226: microtubule cytoskeleton organization	2.01E-03
41	GO:0010087: phloem or xylem histogenesis	2.46E-03
42	GO:0006334: nucleosome assembly	2.95E-03
43	GO:0006325: chromatin organization	3.05E-03
44	GO:0055072: iron ion homeostasis	3.05E-03
45	GO:0009934: regulation of meristem structural organization	3.05E-03
46	GO:0006084: acetyl-CoA metabolic process	3.05E-03
47	GO:0006349: regulation of gene expression by genetic imprinting	3.05E-03
48	GO:0000911: cytokinesis by cell plate formation	3.38E-03
49	GO:0042127: regulation of cell proliferation	5.13E-03
50	GO:0048453: sepal formation	5.89E-03
51	GO:0006259: DNA metabolic process	5.89E-03
52	GO:0051225: spindle assembly	6.71E-03
53	GO:0048451: petal formation	6.71E-03
54	GO:0007275: multicellular organism development	6.72E-03
55	GO:0009165: nucleotide biosynthetic process	7.55E-03
56	GO:0048316: seed development	8.42E-03
57	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	9.35E-03
58	GO:0009909: regulation of flower development	1.04E-02
59	GO:0015992: proton transport	1.13E-02
60	GO:0044267: cellular protein metabolic process	1.23E-02
61	GO:0009966: regulation of signal transduction	1.23E-02
62	GO:0009910: negative regulation of flower development	1.44E-02
63	GO:0010224: response to UV-B	1.44E-02
64	GO:0009553: embryo sac development	1.55E-02
65	GO:0006281: DNA repair	1.90E-02
66	GO:0031047: gene silencing by RNA	1.90E-02
67	GO:0030163: protein catabolic process	2.15E-02
68	GO:0006511: ubiquitin-dependent protein catabolic process	2.20E-02
69	GO:0016579: protein deubiquitination	2.41E-02
70	GO:0048366: leaf development	2.55E-02
71	GO:0009790: embryo development	2.68E-02
72	GO:0009793: embryo development ending in seed dormancy	4.17E-02
73	GO:0010228: vegetative to reproductive phase transition of meristem	4.36E-02
74	GO:0007018: microtubule-based movement	4.52E-02
75	GO:0006200: obsolete ATP catabolic process	4.69E-02
76	GO:0048364: root development	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0003678: DNA helicase activity	4.81E-10
2	GO:0003688: DNA replication origin binding	2.35E-06
3	GO:0004748: ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	8.69E-06
4	GO:0003886: DNA (cytosine-5-)-methyltransferase activity	2.03E-05
5	GO:0003677: DNA binding	9.88E-05
6	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	2.40E-04
7	GO:0010428: methyl-CpNpG binding	2.40E-04
8	GO:0010429: methyl-CpNpN binding	2.40E-04
9	GO:0003916: DNA topoisomerase activity	2.40E-04
10	GO:0030337: DNA polymerase processivity factor activity	2.40E-04
11	GO:0008327: methyl-CpG binding	2.40E-04
12	GO:0046914: transition metal ion binding	2.89E-04
13	GO:0035175: histone kinase activity (H3-S10 specific)	5.71E-04
14	GO:0008569: ATP-dependent microtubule motor activity, minus-end-directed	5.71E-04
15	GO:0003682: chromatin binding	8.43E-04
16	GO:0010385: double-stranded methylated DNA binding	9.74E-04
17	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	1.43E-03
18	GO:0009678: hydrogen-translocating pyrophosphatase activity	1.93E-03
19	GO:0005089: Rho guanyl-nucleotide exchange factor activity	3.05E-03
20	GO:0004427: inorganic diphosphatase activity	4.41E-03
21	GO:0046982: protein heterodimerization activity	4.79E-03
22	GO:0008017: microtubule binding	9.64E-03
23	GO:0016651: oxidoreductase activity, acting on NAD(P)H	1.03E-02
24	GO:0019901: protein kinase binding	1.03E-02
25	GO:0004221: obsolete ubiquitin thiolesterase activity	1.03E-02
26	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	1.13E-02
27	GO:0042393: histone binding	1.67E-02
28	GO:0000166: nucleotide binding	1.94E-02
29	GO:0005524: ATP binding	3.13E-02
30	GO:0008234: cysteine-type peptidase activity	3.71E-02
31	GO:0003777: microtubule motor activity	4.52E-02

Rank	GO Term	Adjusted P value
1	GO:0000307: cyclin-dependent protein kinase holoenzyme complex	0.00E+00
2	GO:0042555: MCM complex	1.13E-10
3	GO:0005971: ribonucleoside-diphosphate reductase complex	8.69E-06
4	GO:0005634: nucleus	4.00E-05
5	GO:0010369: chromocenter	2.40E-04
6	GO:0043626: PCNA complex	2.40E-04
7	GO:0000347: THO complex	2.40E-04
8	GO:0005694: chromosome	5.98E-04
9	GO:0005819: spindle	1.27E-03
10	GO:0005876: spindle microtubule	1.43E-03
11	GO:0000786: nucleosome	2.50E-03
12	GO:0016604: nuclear body	3.71E-03
13	GO:0031966: mitochondrial membrane	1.23E-02
14	GO:0019013: viral nucleocapsid	1.44E-02
15	GO:0005874: microtubule	1.46E-02
16	GO:0009524: phragmoplast	2.41E-02
17	GO:0005875: microtubule associated complex	2.68E-02
18	GO:0045271: respiratory chain complex I	3.87E-02
19	GO:0005737: cytoplasm	4.18E-02
20	GO:0005871: kinesin complex	4.36E-02
21	GO:0005743: mitochondrial inner membrane	4.69E-02