GO Enrichment Analysis of Co-expressed Genes with
GRMZM2G099909
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043137: DNA replication, removal of RNA primer | 0.00E+00 |
| 2 | GO:0006233: dTDP biosynthetic process | 0.00E+00 |
| 3 | GO:0032465: regulation of cytokinesis | 0.00E+00 |
| 4 | GO:0007049: cell cycle | 1.18E-07 |
| 5 | GO:0043987: histone H3-S10 phosphorylation | 2.01E-06 |
| 6 | GO:0016572: histone phosphorylation | 2.25E-06 |
| 7 | GO:0051301: cell division | 3.16E-05 |
| 8 | GO:0006260: DNA replication | 1.34E-04 |
| 9 | GO:0007059: chromosome segregation | 2.19E-04 |
| 10 | GO:0042276: error-prone translesion synthesis | 2.19E-04 |
| 11 | GO:1990426: mitotic recombination-dependent replication fork processing | 2.19E-04 |
| 12 | GO:0006259: DNA metabolic process | 2.53E-04 |
| 13 | GO:0009956: radial pattern formation | 5.25E-04 |
| 14 | GO:0009755: hormone-mediated signaling pathway | 5.25E-04 |
| 15 | GO:0009966: regulation of signal transduction | 7.95E-04 |
| 16 | GO:0008654: phospholipid biosynthetic process | 1.32E-03 |
| 17 | GO:0008356: asymmetric cell division | 1.32E-03 |
| 18 | GO:0032147: activation of protein kinase activity | 1.32E-03 |
| 19 | GO:0006265: DNA topological change | 1.78E-03 |
| 20 | GO:0060236: regulation of mitotic spindle organization | 1.78E-03 |
| 21 | GO:0006281: DNA repair | 2.63E-03 |
| 22 | GO:0055072: iron ion homeostasis | 2.81E-03 |
| 23 | GO:0009934: regulation of meristem structural organization | 2.81E-03 |
| 24 | GO:0010074: maintenance of meristem identity | 3.41E-03 |
| 25 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 4.05E-03 |
| 26 | GO:0006302: double-strand break repair | 4.05E-03 |
| 27 | GO:0007018: microtubule-based movement | 5.10E-03 |
| 28 | GO:0010048: vernalization response | 5.42E-03 |
| 29 | GO:0006284: base-excision repair | 5.42E-03 |
| 30 | GO:0006974: cellular response to DNA damage stimulus | 6.16E-03 |
| 31 | GO:0019915: lipid storage | 6.16E-03 |
| 32 | GO:0016571: histone methylation | 6.94E-03 |
| 33 | GO:0010332: response to gamma radiation | 6.94E-03 |
| 34 | GO:0010389: regulation of G2/M transition of mitotic cell cycle | 6.94E-03 |
| 35 | GO:0006289: nucleotide-excision repair | 7.75E-03 |
| 36 | GO:0009607: response to biotic stimulus | 7.75E-03 |
| 37 | GO:0006406: mRNA export from nucleus | 7.75E-03 |
| 38 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 8.59E-03 |
| 39 | GO:0010162: seed dormancy process | 8.59E-03 |
| 40 | GO:0006446: regulation of translational initiation | 8.59E-03 |
| 41 | GO:0050826: response to freezing | 9.46E-03 |
| 42 | GO:0001731: formation of translation preinitiation complex | 9.46E-03 |
| 43 | GO:0000724: double-strand break repair via homologous recombination | 1.03E-02 |
| 44 | GO:0006310: DNA recombination | 1.13E-02 |
| 45 | GO:0008219: cell death | 1.13E-02 |
| 46 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 1.23E-02 |
| 47 | GO:0010182: sugar mediated signaling pathway | 1.32E-02 |
| 48 | GO:0000278: mitotic cell cycle | 1.43E-02 |
| 49 | GO:0009845: seed germination | 1.64E-02 |
| 50 | GO:0000394: RNA splicing, via endonucleolytic cleavage and ligation | 1.75E-02 |
| 51 | GO:0009933: meristem structural organization | 1.86E-02 |
| 52 | GO:0006275: regulation of DNA replication | 1.86E-02 |
| 53 | GO:0000226: microtubule cytoskeleton organization | 1.98E-02 |
| 54 | GO:0006468: protein phosphorylation | 1.98E-02 |
| 55 | GO:0016579: protein deubiquitination | 2.21E-02 |
| 56 | GO:0048366: leaf development | 2.34E-02 |
| 57 | GO:0009086: methionine biosynthetic process | 2.34E-02 |
| 58 | GO:0051726: regulation of cell cycle | 2.46E-02 |
| 59 | GO:0009640: photomorphogenesis | 3.13E-02 |
| 60 | GO:0016310: phosphorylation | 3.31E-02 |
| 61 | GO:0010228: vegetative to reproductive phase transition of meristem | 4.00E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003881: CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity | 0.00E+00 |
| 2 | GO:0008409: 5'-3' exonuclease activity | 0.00E+00 |
| 3 | GO:0004798: thymidylate kinase activity | 0.00E+00 |
| 4 | GO:0035175: histone kinase activity (H3-S10 specific) | 2.01E-06 |
| 5 | GO:0030337: DNA polymerase processivity factor activity | 2.19E-04 |
| 6 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 2.19E-04 |
| 7 | GO:0017108: 5'-flap endonuclease activity | 2.19E-04 |
| 8 | GO:0000150: recombinase activity | 2.19E-04 |
| 9 | GO:0003916: DNA topoisomerase activity | 2.19E-04 |
| 10 | GO:0003684: damaged DNA binding | 2.53E-04 |
| 11 | GO:0016780: phosphotransferase activity, for other substituted phosphate groups | 8.95E-04 |
| 12 | GO:0070628: proteasome binding | 8.95E-04 |
| 13 | GO:0008017: microtubule binding | 1.11E-03 |
| 14 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 1.32E-03 |
| 15 | GO:0008094: DNA-dependent ATPase activity | 3.41E-03 |
| 16 | GO:0019904: protein domain specific binding | 3.41E-03 |
| 17 | GO:0043130: ubiquitin binding | 3.41E-03 |
| 18 | GO:0043022: ribosome binding | 3.41E-03 |
| 19 | GO:0005524: ATP binding | 4.27E-03 |
| 20 | GO:0003777: microtubule motor activity | 5.10E-03 |
| 21 | GO:0004518: nuclease activity | 5.42E-03 |
| 22 | GO:0003697: single-stranded DNA binding | 6.16E-03 |
| 23 | GO:0003690: double-stranded DNA binding | 6.16E-03 |
| 24 | GO:0004519: endonuclease activity | 6.94E-03 |
| 25 | GO:0004527: exonuclease activity | 8.59E-03 |
| 26 | GO:0019901: protein kinase binding | 9.46E-03 |
| 27 | GO:0016772: transferase activity, transferring phosphorus-containing groups | 1.32E-02 |
| 28 | GO:0004674: protein serine/threonine kinase activity | 1.50E-02 |
| 29 | GO:0004672: protein kinase activity | 1.90E-02 |
| 30 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 2.21E-02 |
| 31 | GO:0000166: nucleotide binding | 2.85E-02 |
| 32 | GO:0005516: calmodulin binding | 3.27E-02 |
| 33 | GO:0016301: kinase activity | 3.38E-02 |
| 34 | GO:0008026: ATP-dependent helicase activity | 3.70E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000307: cyclin-dependent protein kinase holoenzyme complex | 0.00E+00 |
| 2 | GO:0005819: spindle | 5.79E-05 |
| 3 | GO:0043626: PCNA complex | 2.19E-04 |
| 4 | GO:0005654: nucleoplasm | 7.95E-04 |
| 5 | GO:0000775: chromosome, centromeric region | 8.95E-04 |
| 6 | GO:0005635: nuclear envelope | 1.38E-03 |
| 7 | GO:0005874: microtubule | 1.90E-03 |
| 8 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 3.41E-03 |
| 9 | GO:0005871: kinesin complex | 4.84E-03 |
| 10 | GO:0005730: nucleolus | 5.45E-03 |
| 11 | GO:0005634: nucleus | 8.23E-03 |
| 12 | GO:0016282: eukaryotic 43S preinitiation complex | 9.46E-03 |
| 13 | GO:0033290: eukaryotic 48S preinitiation complex | 9.46E-03 |
| 14 | GO:0005852: eukaryotic translation initiation factor 3 complex | 1.03E-02 |
| 15 | GO:0031966: mitochondrial membrane | 1.13E-02 |
| 16 | GO:0005694: chromosome | 2.01E-02 |
| 17 | GO:0005875: microtubule associated complex | 2.46E-02 |
| 18 | GO:0045271: respiratory chain complex I | 3.55E-02 |
| 19 | GO:0005747: mitochondrial respiratory chain complex I | 3.70E-02 |
| 20 | GO:0005743: mitochondrial inner membrane | 4.30E-02 |