co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G099367

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:2000030: regulation of response to red or far red light	0.00E+00
2	GO:0035970: peptidyl-threonine dephosphorylation	0.00E+00
3	GO:0010269: response to selenium ion	0.00E+00
4	GO:0018283: iron incorporation into metallo-sulfur cluster	0.00E+00
5	GO:0042549: photosystem II stabilization	0.00E+00
6	GO:0010207: photosystem II assembly	1.03E-11
7	GO:0009657: plastid organization	1.82E-09
8	GO:0010196: nonphotochemical quenching	2.66E-08
9	GO:0006364: rRNA processing	3.97E-08
10	GO:0015979: photosynthesis	2.41E-07
11	GO:0035304: regulation of protein dephosphorylation	4.15E-07
12	GO:0009773: photosynthetic electron transport in photosystem I	4.15E-07
13	GO:0019761: glucosinolate biosynthetic process	3.12E-06
14	GO:0043085: positive regulation of catalytic activity	1.71E-05
15	GO:0070838: divalent metal ion transport	1.85E-05
16	GO:0010205: photoinhibition	4.68E-05
17	GO:0030003: cellular cation homeostasis	4.68E-05
18	GO:0010027: thylakoid membrane organization	5.16E-05
19	GO:0006098: pentose-phosphate shunt	8.57E-05
20	GO:0019344: cysteine biosynthetic process	8.65E-05
21	GO:0016117: carotenoid biosynthetic process	8.65E-05
22	GO:0001887: selenium compound metabolic process	1.55E-04
23	GO:0006534: cysteine metabolic process	1.55E-04
24	GO:0071482: cellular response to light stimulus	1.55E-04
25	GO:0006021: inositol biosynthetic process	1.55E-04
26	GO:0009768: photosynthesis, light harvesting in photosystem I	1.55E-04
27	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	1.88E-04
28	GO:0010236: plastoquinone biosynthetic process	3.80E-04
29	GO:0010155: regulation of proton transport	4.93E-04
30	GO:0009409: response to cold	4.96E-04
31	GO:0005986: sucrose biosynthetic process	6.51E-04
32	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	9.54E-04
33	GO:0006790: sulfur compound metabolic process	9.64E-04
34	GO:0006879: cellular iron ion homeostasis	9.64E-04
35	GO:0006662: glycerol ether metabolic process	1.34E-03
36	GO:0009637: response to blue light	1.45E-03
37	GO:0045454: cell redox homeostasis	1.59E-03
38	GO:0010114: response to red light	1.67E-03
39	GO:0009693: ethylene biosynthetic process	1.69E-03
40	GO:0010218: response to far red light	1.91E-03
41	GO:0000023: maltose metabolic process	2.03E-03
42	GO:0010206: photosystem II repair	2.08E-03
43	GO:0034660: ncRNA metabolic process	2.08E-03
44	GO:0055072: iron ion homeostasis	2.08E-03
45	GO:0016311: dephosphorylation	2.29E-03
46	GO:0009744: response to sucrose	2.43E-03
47	GO:0019853: L-ascorbic acid biosynthetic process	2.49E-03
48	GO:0015995: chlorophyll biosynthetic process	2.87E-03
49	GO:0000302: response to reactive oxygen species	3.43E-03
50	GO:0006006: glucose metabolic process	3.95E-03
51	GO:0010039: response to iron ion	4.50E-03
52	GO:0009765: photosynthesis, light harvesting	4.50E-03
53	GO:0046854: phosphatidylinositol phosphorylation	5.04E-03
54	GO:0042631: cellular response to water deprivation	5.04E-03
55	GO:0044262: cellular carbohydrate metabolic process	5.63E-03
56	GO:0006108: malate metabolic process	5.63E-03
57	GO:0019252: starch biosynthetic process	6.06E-03
58	GO:0006636: unsaturated fatty acid biosynthetic process	6.23E-03
59	GO:0042742: defense response to bacterium	7.29E-03
60	GO:0019684: photosynthesis, light reaction	7.53E-03
61	GO:0080167: response to karrikin	8.16E-03
62	GO:0018298: protein-chromophore linkage	8.19E-03
63	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	8.19E-03
64	GO:0010103: stomatal complex morphogenesis	8.89E-03
65	GO:0046777: protein autophosphorylation	9.61E-03
66	GO:0009902: chloroplast relocation	1.35E-02
67	GO:0006520: cellular amino acid metabolic process	1.35E-02
68	GO:0030163: protein catabolic process	1.43E-02
69	GO:0009073: aromatic amino acid family biosynthetic process	1.60E-02
70	GO:0006099: tricarboxylic acid cycle	1.87E-02
71	GO:0016226: iron-sulfur cluster assembly	1.97E-02
72	GO:0009658: chloroplast organization	2.26E-02
73	GO:0009624: response to nematode	2.78E-02
74	GO:0006812: cation transport	2.78E-02
75	GO:0009644: response to high light intensity	2.89E-02
76	GO:0022900: electron transport chain	2.99E-02
77	GO:0005975: carbohydrate metabolic process	3.34E-02
78	GO:0045893: positive regulation of transcription, DNA-templated	3.93E-02
79	GO:0008152: metabolic process	3.99E-02
80	GO:0009416: response to light stimulus	4.56E-02
81	GO:0006979: response to oxidative stress	4.73E-02

Rank	GO Term	Adjusted P value
1	GO:0010357: homogentisate solanesyltransferase activity	0.00E+00
2	GO:0009496: plastoquinol--plastocyanin reductase activity	0.00E+00
3	GO:0015038: glutathione disulfide oxidoreductase activity	0.00E+00
4	GO:0008934: inositol monophosphate 1-phosphatase activity	0.00E+00
5	GO:0010242: oxygen evolving activity	0.00E+00
6	GO:0010356: homogentisate geranylgeranyltransferase activity	0.00E+00
7	GO:0010355: homogentisate farnesyltransferase activity	0.00E+00
8	GO:0010347: L-galactose-1-phosphate phosphatase activity	0.00E+00
9	GO:0046554: malate dehydrogenase (NADP+) activity	0.00E+00
10	GO:0009000: selenocysteine lyase activity	0.00E+00
11	GO:0050307: sucrose-phosphate phosphatase activity	1.55E-04
12	GO:0004750: ribulose-phosphate 3-epimerase activity	1.55E-04
13	GO:0008974: phosphoribulokinase activity	1.55E-04
14	GO:0016679: oxidoreductase activity, acting on diphenols and related substances as donors	1.55E-04
15	GO:0031071: cysteine desulfurase activity	1.55E-04
16	GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity	3.80E-04
17	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	3.80E-04
18	GO:0015035: protein disulfide oxidoreductase activity	4.74E-04
19	GO:0004659: prenyltransferase activity	9.64E-04
20	GO:0016857: racemase and epimerase activity, acting on carbohydrates and derivatives	1.31E-03
21	GO:0016615: malate dehydrogenase activity	2.08E-03
22	GO:0008121: ubiquinol-cytochrome-c reductase activity	2.08E-03
23	GO:0008047: enzyme activator activity	2.49E-03
24	GO:0030060: L-malate dehydrogenase activity	2.49E-03
25	GO:0008266: poly(U) RNA binding	2.94E-03
26	GO:0003824: catalytic activity	3.02E-03
27	GO:0003725: double-stranded RNA binding	3.43E-03
28	GO:0003993: acid phosphatase activity	5.04E-03
29	GO:0016168: chlorophyll binding	8.19E-03
30	GO:0015297: antiporter activity	9.61E-03
31	GO:0030170: pyridoxal phosphate binding	9.64E-03
32	GO:0051537: 2 iron, 2 sulfur cluster binding	1.03E-02
33	GO:0004222: metalloendopeptidase activity	1.19E-02
34	GO:0008483: transaminase activity	1.43E-02
35	GO:0016853: isomerase activity	1.53E-02
36	GO:0010181: FMN binding	1.60E-02
37	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	1.60E-02
38	GO:0016791: phosphatase activity	2.26E-02
39	GO:0050661: NADP binding	2.57E-02
40	GO:0051287: NAD binding	4.05E-02
41	GO:0051536: iron-sulfur cluster binding	4.18E-02
42	GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	4.82E-02

Rank	GO Term	Adjusted P value
1	GO:0009571: proplastid stroma	0.00E+00
2	GO:0009783: photosystem II antenna complex	0.00E+00
3	GO:0009279: cell outer membrane	0.00E+00
4	GO:0009579: thylakoid	9.26E-17
5	GO:0009507: chloroplast	1.17E-15
6	GO:0009535: chloroplast thylakoid membrane	9.87E-12
7	GO:0009941: chloroplast envelope	5.10E-09
8	GO:0010287: plastoglobule	3.63E-07
9	GO:0009522: photosystem I	4.15E-07
10	GO:0009570: chloroplast stroma	8.81E-07
11	GO:0010319: stromule	3.65E-06
12	GO:0009538: photosystem I reaction center	9.74E-06
13	GO:0009534: chloroplast thylakoid	1.22E-05
14	GO:0048046: apoplast	9.59E-05
15	GO:0031977: thylakoid lumen	1.21E-04
16	GO:0009517: PSII associated light-harvesting complex II	1.55E-04
17	GO:0042651: thylakoid membrane	2.74E-04
18	GO:0009543: chloroplast thylakoid lumen	2.74E-04
19	GO:0009533: chloroplast stromal thylakoid	3.80E-04
20	GO:0019898: extrinsic component of membrane	1.69E-03
21	GO:0009654: photosystem II oxygen evolving complex	2.08E-03
22	GO:0009706: chloroplast inner membrane	1.19E-02
23	GO:0009523: photosystem II	1.52E-02
24	GO:0009536: plastid	4.30E-02