Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G098520

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0035436: triose phosphate transmembrane transport0.00E+00
2GO:0015714: phosphoenolpyruvate transport0.00E+00
3GO:0071486: cellular response to high light intensity0.00E+00
4GO:0042794: rRNA transcription from plastid promoter0.00E+00
5GO:0089722: phosphoenolpyruvate transmembrane transport0.00E+00
6GO:0015979: photosynthesis3.99E-06
7GO:0006412: translation1.62E-05
8GO:0019676: ammonia assimilation cycle1.38E-04
9GO:0045036: protein targeting to chloroplast1.92E-04
10GO:0010236: plastoquinone biosynthetic process3.40E-04
11GO:0032544: plastid translation3.40E-04
12GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly3.40E-04
13GO:0019684: photosynthesis, light reaction3.66E-04
14GO:0010155: regulation of proton transport4.18E-04
15GO:0046777: protein autophosphorylation5.31E-04
16GO:0034599: cellular response to oxidative stress5.82E-04
17GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway7.69E-04
18GO:0010189: vitamin E biosynthetic process1.18E-03
19GO:0070838: divalent metal ion transport1.18E-03
20GO:0007568: aging1.18E-03
21GO:0019344: cysteine biosynthetic process1.23E-03
22GO:0016117: carotenoid biosynthetic process1.23E-03
23GO:0006542: glutamine biosynthetic process1.52E-03
24GO:0009814: defense response, incompatible interaction1.87E-03
25GO:0006801: superoxide metabolic process1.87E-03
26GO:0030003: cellular cation homeostasis1.87E-03
27GO:0015995: chlorophyll biosynthetic process2.45E-03
28GO:0009407: toxin catabolic process3.07E-03
29GO:0009697: salicylic acid biosynthetic process3.54E-03
30GO:0006354: DNA-templated transcription, elongation3.54E-03
31GO:0008380: RNA splicing3.54E-03
32GO:0009765: photosynthesis, light harvesting4.02E-03
33GO:0010027: thylakoid membrane organization4.97E-03
34GO:0042793: transcription from plastid promoter5.04E-03
35GO:0007030: Golgi organization5.58E-03
36GO:0006636: unsaturated fatty acid biosynthetic process5.58E-03
37GO:0009750: response to fructose6.15E-03
38GO:0006833: water transport6.15E-03
39GO:0006972: hyperosmotic response6.15E-03
40GO:0006098: pentose-phosphate shunt6.48E-03
41GO:0009749: response to glucose6.74E-03
42GO:0018298: protein-chromophore linkage7.35E-03
43GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione7.35E-03
44GO:0006807: nitrogen compound metabolic process8.60E-03
45GO:0032502: developmental process9.25E-03
46GO:0006364: rRNA processing1.14E-02
47GO:0009735: response to cytokinin1.35E-02
48GO:0009637: response to blue light1.51E-02
49GO:0009790: embryo development1.59E-02
50GO:0019761: glucosinolate biosynthetic process1.59E-02
51GO:0010114: response to red light1.67E-02
52GO:0010218: response to far red light1.85E-02
53GO:0009744: response to sucrose2.20E-02
54GO:0009644: response to high light intensity2.58E-02
55GO:0043085: positive regulation of catalytic activity2.78E-02
56GO:0010207: photosystem II assembly3.19E-02
57GO:0044237: cellular metabolic process3.62E-02
RankGO TermAdjusted P value
1GO:0015121: phosphoenolpyruvate:phosphate antiporter activity0.00E+00
2GO:0004802: transketolase activity0.00E+00
3GO:0009670: triose-phosphate:phosphate antiporter activity0.00E+00
4GO:0003735: structural constituent of ribosome7.88E-06
5GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity1.38E-04
6GO:0016168: chlorophyll binding4.18E-04
7GO:0004356: glutamate-ammonia ligase activity1.52E-03
8GO:0004784: superoxide dismutase activity2.24E-03
9GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor3.07E-03
10GO:0003690: double-stranded DNA binding4.02E-03
11GO:0019843: rRNA binding1.13E-02
12GO:0005516: calmodulin binding2.11E-02
RankGO TermAdjusted P value
1GO:0009941: chloroplast envelope1.21E-10
2GO:0009507: chloroplast2.51E-09
3GO:0009579: thylakoid3.27E-08
4GO:0009570: chloroplast stroma4.05E-07
5GO:0009535: chloroplast thylakoid membrane7.45E-06
6GO:0005840: ribosome1.67E-05
7GO:0009522: photosystem I1.76E-05
8GO:0009538: photosystem I reaction center8.64E-04
9GO:0009523: photosystem II1.05E-03
10GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)1.52E-03
11GO:0015935: small ribosomal subunit1.53E-03
12GO:0009534: chloroplast thylakoid2.45E-03
13GO:0009295: nucleoid4.02E-03
14GO:0030529: intracellular ribonucleoprotein complex4.04E-03
15GO:0042651: thylakoid membrane5.04E-03
16GO:0009543: chloroplast thylakoid lumen5.04E-03
17GO:0031977: thylakoid lumen1.76E-02
18GO:0010287: plastoglobule2.48E-02
19GO:0009536: plastid3.67E-02
20GO:0016020: membrane4.85E-02
21GO:0005622: intracellular4.97E-02