co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G095082

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009780: photosynthetic NADP+ reduction	0.00E+00
2	GO:0042549: photosystem II stabilization	0.00E+00
3	GO:0035436: triose phosphate transmembrane transport	0.00E+00
4	GO:0015714: phosphoenolpyruvate transport	0.00E+00
5	GO:0030243: cellulose metabolic process	0.00E+00
6	GO:0030388: fructose 1,6-bisphosphate metabolic process	0.00E+00
7	GO:0089722: phosphoenolpyruvate transmembrane transport	0.00E+00
8	GO:0042550: photosystem I stabilization	0.00E+00
9	GO:0015979: photosynthesis	1.28E-26
10	GO:0009765: photosynthesis, light harvesting	3.38E-09
11	GO:0043085: positive regulation of catalytic activity	1.39E-08
12	GO:0010207: photosystem II assembly	2.85E-08
13	GO:0018298: protein-chromophore linkage	4.90E-08
14	GO:0009773: photosynthetic electron transport in photosystem I	4.39E-06
15	GO:0019344: cysteine biosynthetic process	2.56E-05
16	GO:0006098: pentose-phosphate shunt	6.46E-05
17	GO:0070838: divalent metal ion transport	6.87E-05
18	GO:0009657: plastid organization	7.20E-05
19	GO:0010103: stomatal complex morphogenesis	1.06E-04
20	GO:0035304: regulation of protein dephosphorylation	1.26E-04
21	GO:0030003: cellular cation homeostasis	1.64E-04
22	GO:0006364: rRNA processing	2.22E-04
23	GO:0019676: ammonia assimilation cycle	3.43E-04
24	GO:0006878: cellular copper ion homeostasis	3.43E-04
25	GO:0009637: response to blue light	4.20E-04
26	GO:0006814: sodium ion transport	4.87E-04
27	GO:0010114: response to red light	5.15E-04
28	GO:0010218: response to far red light	6.20E-04
29	GO:0000023: maltose metabolic process	6.79E-04
30	GO:0006875: cellular metal ion homeostasis	8.04E-04
31	GO:0009624: response to nematode	1.10E-03
32	GO:0010155: regulation of proton transport	1.48E-03
33	GO:0046777: protein autophosphorylation	1.86E-03
34	GO:0045037: protein import into chloroplast stroma	1.99E-03
35	GO:0010196: nonphotochemical quenching	1.99E-03
36	GO:0050821: protein stabilization	1.99E-03
37	GO:0034755: iron ion transmembrane transport	2.66E-03
38	GO:0006526: arginine biosynthetic process	2.66E-03
39	GO:0070084: protein initiator methionine removal	2.66E-03
40	GO:0006796: phosphate-containing compound metabolic process	2.66E-03
41	GO:0009772: photosynthetic electron transport in photosystem II	2.66E-03
42	GO:0019252: starch biosynthetic process	2.83E-03
43	GO:0009902: chloroplast relocation	2.99E-03
44	GO:0006535: cysteine biosynthetic process from serine	3.45E-03
45	GO:0006561: proline biosynthetic process	3.45E-03
46	GO:0016117: carotenoid biosynthetic process	4.17E-03
47	GO:0055072: iron ion homeostasis	4.31E-03
48	GO:0009987: cellular process	4.31E-03
49	GO:0010206: photosystem II repair	4.31E-03
50	GO:0034660: ncRNA metabolic process	4.31E-03
51	GO:0006801: superoxide metabolic process	4.31E-03
52	GO:0010205: photoinhibition	4.31E-03
53	GO:0019761: glucosinolate biosynthetic process	4.50E-03
54	GO:0005985: sucrose metabolic process	5.20E-03
55	GO:0048868: pollen tube development	6.17E-03
56	GO:0006096: glycolytic process	6.53E-03
57	GO:0009832: plant-type cell wall biogenesis	7.21E-03
58	GO:0000302: response to reactive oxygen species	7.21E-03
59	GO:0016556: mRNA modification	8.29E-03
60	GO:0006006: glucose metabolic process	8.29E-03
61	GO:0006754: ATP biosynthetic process	8.29E-03
62	GO:0008652: cellular amino acid biosynthetic process	8.47E-03
63	GO:0015995: chlorophyll biosynthetic process	8.47E-03
64	GO:0010039: response to iron ion	9.44E-03
65	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	9.44E-03
66	GO:0042793: transcription from plastid promoter	1.19E-02
67	GO:0015996: chlorophyll catabolic process	1.32E-02
68	GO:0009409: response to cold	1.43E-02
69	GO:0006833: water transport	1.45E-02
70	GO:0009750: response to fructose	1.45E-02
71	GO:0016049: cell growth	1.45E-02
72	GO:0016126: sterol biosynthetic process	1.59E-02
73	GO:0006094: gluconeogenesis	1.59E-02
74	GO:0019684: photosynthesis, light reaction	1.59E-02
75	GO:0015992: proton transport	1.59E-02
76	GO:0010027: thylakoid membrane organization	1.71E-02
77	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	1.73E-02
78	GO:0015986: ATP synthesis coupled proton transport	2.20E-02
79	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	2.23E-02
80	GO:0080167: response to karrikin	2.39E-02
81	GO:0042742: defense response to bacterium	2.85E-02
82	GO:0000413: protein peptidyl-prolyl isomerization	2.87E-02
83	GO:0045454: cell redox homeostasis	3.29E-02
84	GO:0006662: glycerol ether metabolic process	3.42E-02
85	GO:0009073: aromatic amino acid family biosynthetic process	3.42E-02
86	GO:0006811: ion transport	3.80E-02
87	GO:0009658: chloroplast organization	4.83E-02

Rank	GO Term	Adjusted P value
1	GO:0016532: superoxide dismutase copper chaperone activity	0.00E+00
2	GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors	0.00E+00
3	GO:0009670: triose-phosphate:phosphate antiporter activity	0.00E+00
4	GO:0015131: oxaloacetate transmembrane transporter activity	0.00E+00
5	GO:0015139: alpha-ketoglutarate transmembrane transporter activity	0.00E+00
6	GO:0015121: phosphoenolpyruvate:phosphate antiporter activity	0.00E+00
7	GO:0010242: oxygen evolving activity	0.00E+00
8	GO:0003991: acetylglutamate kinase activity	0.00E+00
9	GO:0030385: ferredoxin:thioredoxin reductase activity	0.00E+00
10	GO:0008937: ferredoxin-NAD(P) reductase activity	0.00E+00
11	GO:0016168: chlorophyll binding	7.64E-12
12	GO:0004750: ribulose-phosphate 3-epimerase activity	3.43E-04
13	GO:0008974: phosphoribulokinase activity	3.43E-04
14	GO:0004618: phosphoglycerate kinase activity	3.43E-04
15	GO:0015088: copper uptake transmembrane transporter activity	3.43E-04
16	GO:0015140: malate transmembrane transporter activity	3.43E-04
17	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	8.04E-04
18	GO:0004042: acetyl-CoA:L-glutamate N-acetyltransferase activity	8.04E-04
19	GO:0004349: glutamate 5-kinase activity	8.04E-04
20	GO:0004462: lactoylglutathione lyase activity	8.04E-04
21	GO:0003849: 3-deoxy-7-phosphoheptulonate synthase activity	8.04E-04
22	GO:0004124: cysteine synthase activity	1.99E-03
23	GO:0004332: fructose-bisphosphate aldolase activity	1.99E-03
24	GO:0005381: iron ion transmembrane transporter activity	2.66E-03
25	GO:0016857: racemase and epimerase activity, acting on carbohydrates and derivatives	2.66E-03
26	GO:0070006: metalloaminopeptidase activity	2.66E-03
27	GO:0008235: metalloexopeptidase activity	3.45E-03
28	GO:0004784: superoxide dismutase activity	5.20E-03
29	GO:0004427: inorganic diphosphatase activity	6.17E-03
30	GO:0042578: phosphoric ester hydrolase activity	6.17E-03
31	GO:0008266: poly(U) RNA binding	6.17E-03
32	GO:0005215: transporter activity	6.27E-03
33	GO:0004177: aminopeptidase activity	7.21E-03
34	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	9.44E-03
35	GO:0005507: copper ion binding	1.02E-02
36	GO:0046961: proton-transporting ATPase activity, rotational mechanism	1.32E-02
37	GO:0015035: protein disulfide oxidoreductase activity	1.33E-02
38	GO:0005509: calcium ion binding	1.46E-02
39	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.59E-02
40	GO:0046872: metal ion binding	2.05E-02
41	GO:0051539: 4 iron, 4 sulfur cluster binding	3.05E-02
42	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.23E-02
43	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	3.42E-02
44	GO:0016829: lyase activity	4.46E-02

Rank	GO Term	Adjusted P value
1	GO:0009279: cell outer membrane	0.00E+00
2	GO:0009538: photosystem I reaction center	0.00E+00
3	GO:0009783: photosystem II antenna complex	0.00E+00
4	GO:0030093: chloroplast photosystem I	0.00E+00
5	GO:0009579: thylakoid	6.51E-27
6	GO:0009507: chloroplast	5.38E-25
7	GO:0009522: photosystem I	1.06E-24
8	GO:0009535: chloroplast thylakoid membrane	2.34E-20
9	GO:0009941: chloroplast envelope	5.06E-18
10	GO:0009523: photosystem II	6.75E-16
11	GO:0010287: plastoglobule	8.94E-14
12	GO:0019898: extrinsic component of membrane	5.91E-09
13	GO:0009654: photosystem II oxygen evolving complex	1.54E-08
14	GO:0009534: chloroplast thylakoid	2.41E-07
15	GO:0009543: chloroplast thylakoid lumen	7.19E-07
16	GO:0031977: thylakoid lumen	1.66E-06
17	GO:0009570: chloroplast stroma	2.89E-06
18	GO:0010319: stromule	3.46E-05
19	GO:0048046: apoplast	4.21E-05
20	GO:0016020: membrane	2.92E-04
21	GO:0009517: PSII associated light-harvesting complex II	3.43E-04
22	GO:0009533: chloroplast stromal thylakoid	8.04E-04
23	GO:0009508: plastid chromosome	2.66E-03
24	GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1)	4.31E-03
25	GO:0009295: nucleoid	9.44E-03
26	GO:0042651: thylakoid membrane	1.19E-02
27	GO:0009706: chloroplast inner membrane	2.53E-02