co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G094072

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042407: cristae formation	0.00E+00
2	GO:0046653: tetrahydrofolate metabolic process	0.00E+00
3	GO:0043953: protein transport by the Tat complex	0.00E+00
4	GO:0032543: mitochondrial translation	0.00E+00
5	GO:0046506: sulfolipid biosynthetic process	0.00E+00
6	GO:0010117: photoprotection	0.00E+00
7	GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation	0.00E+00
8	GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic	0.00E+00
9	GO:0042780: tRNA 3'-end processing	0.00E+00
10	GO:1900865: chloroplast RNA modification	0.00E+00
11	GO:0006457: protein folding	3.30E-08
12	GO:0009658: chloroplast organization	3.57E-06
13	GO:0010206: photosystem II repair	1.82E-04
14	GO:0009902: chloroplast relocation	3.01E-04
15	GO:0045893: positive regulation of transcription, DNA-templated	3.06E-04
16	GO:0006591: ornithine metabolic process	3.66E-04
17	GO:0018160: peptidyl-pyrromethane cofactor linkage	3.66E-04
18	GO:0006423: cysteinyl-tRNA aminoacylation	3.66E-04
19	GO:0071722: detoxification of arsenic-containing substance	3.66E-04
20	GO:0010027: thylakoid membrane organization	4.39E-04
21	GO:0045036: protein targeting to chloroplast	7.85E-04
22	GO:0010380: regulation of chlorophyll biosynthetic process	8.59E-04
23	GO:1901671: positive regulation of superoxide dismutase activity	8.59E-04
24	GO:0019481: L-alanine catabolic process, by transamination	8.59E-04
25	GO:0042793: transcription from plastid promoter	9.30E-04
26	GO:0006655: phosphatidylglycerol biosynthetic process	9.30E-04
27	GO:0006450: regulation of translational fidelity	1.45E-03
28	GO:0006733: oxidoreduction coenzyme metabolic process	1.45E-03
29	GO:0051085: chaperone mediated protein folding requiring cofactor	1.45E-03
30	GO:0016075: rRNA catabolic process	1.45E-03
31	GO:0043067: regulation of programmed cell death	1.45E-03
32	GO:0009247: glycolipid biosynthetic process	1.45E-03
33	GO:0015867: ATP transport	1.45E-03
34	GO:0000304: response to singlet oxygen	1.45E-03
35	GO:0006364: rRNA processing	1.68E-03
36	GO:0009627: systemic acquired resistance	1.82E-03
37	GO:0010207: photosystem II assembly	1.96E-03
38	GO:0035304: regulation of protein dephosphorylation	2.03E-03
39	GO:0042026: protein refolding	2.11E-03
40	GO:0006782: protoporphyrinogen IX biosynthetic process	2.11E-03
41	GO:0009117: nucleotide metabolic process	2.11E-03
42	GO:0045037: protein import into chloroplast stroma	2.11E-03
43	GO:0006353: DNA-templated transcription, termination	2.11E-03
44	GO:0019375: galactolipid biosynthetic process	2.11E-03
45	GO:0045038: protein import into chloroplast thylakoid membrane	2.11E-03
46	GO:0019748: secondary metabolic process	2.83E-03
47	GO:0010468: regulation of gene expression	2.83E-03
48	GO:0006102: isocitrate metabolic process	3.68E-03
49	GO:0006749: glutathione metabolic process	3.68E-03
50	GO:0031347: regulation of defense response	3.68E-03
51	GO:0009306: protein secretion	3.68E-03
52	GO:0009073: aromatic amino acid family biosynthetic process	4.24E-03
53	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	4.30E-03
54	GO:0006189: 'de novo' IMP biosynthetic process	4.59E-03
55	GO:0034660: ncRNA metabolic process	4.59E-03
56	GO:0019538: protein metabolic process	4.59E-03
57	GO:0009106: lipoate metabolic process	4.59E-03
58	GO:0032880: regulation of protein localization	4.59E-03
59	GO:0006766: vitamin metabolic process	4.59E-03
60	GO:0009108: coenzyme biosynthetic process	4.59E-03
61	GO:0033014: tetrapyrrole biosynthetic process	4.59E-03
62	GO:0006399: tRNA metabolic process	5.55E-03
63	GO:0051604: protein maturation	5.55E-03
64	GO:0016226: iron-sulfur cluster assembly	5.67E-03
65	GO:0045087: innate immune response	6.59E-03
66	GO:0001666: response to hypoxia	6.59E-03
67	GO:0000302: response to reactive oxygen species	7.69E-03
68	GO:0009407: toxin catabolic process	7.69E-03
69	GO:0016556: mRNA modification	8.85E-03
70	GO:0015995: chlorophyll biosynthetic process	9.30E-03
71	GO:0006546: glycine catabolic process	1.01E-02
72	GO:0006779: porphyrin-containing compound biosynthetic process	1.01E-02
73	GO:0006200: obsolete ATP catabolic process	1.09E-02
74	GO:0009408: response to heat	1.12E-02
75	GO:0031408: oxylipin biosynthetic process	1.27E-02
76	GO:0051607: defense response to virus	1.27E-02
77	GO:0010197: polar nucleus fusion	1.41E-02
78	GO:0006636: unsaturated fatty acid biosynthetic process	1.41E-02
79	GO:0042545: cell wall modification	1.55E-02
80	GO:0006396: RNA processing	1.59E-02
81	GO:0009409: response to cold	1.64E-02
82	GO:0030154: cell differentiation	1.70E-02
83	GO:0016036: cellular response to phosphate starvation	1.85E-02
84	GO:0035196: production of miRNAs involved in gene silencing by miRNA	1.85E-02
85	GO:0008219: cell death	1.85E-02
86	GO:0044267: cellular protein metabolic process	1.85E-02
87	GO:0010267: production of ta-siRNAs involved in RNA interference	1.85E-02
88	GO:0006352: DNA-templated transcription, initiation	2.01E-02
89	GO:0009773: photosynthetic electron transport in photosystem I	2.18E-02
90	GO:0009695: jasmonic acid biosynthetic process	2.34E-02
91	GO:0006869: lipid transport	2.34E-02
92	GO:0009853: photorespiration	2.88E-02
93	GO:0006520: cellular amino acid metabolic process	3.07E-02
94	GO:0006626: protein targeting to mitochondrion	3.07E-02
95	GO:0006184: obsolete GTP catabolic process	3.19E-02
96	GO:0030163: protein catabolic process	3.25E-02
97	GO:0045454: cell redox homeostasis	3.61E-02
98	GO:0019344: cysteine biosynthetic process	3.85E-02
99	GO:0019761: glucosinolate biosynthetic process	4.06E-02
100	GO:0006099: tricarboxylic acid cycle	4.27E-02
101	GO:0048481: plant ovule development	4.93E-02
102	GO:0000023: maltose metabolic process	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0042781: 3'-tRNA processing endoribonuclease activity	0.00E+00
2	GO:0008864: formyltetrahydrofolate deformylase activity	0.00E+00
3	GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	0.00E+00
4	GO:0009977: proton motive force dependent protein transmembrane transporter activity	0.00E+00
5	GO:0046507: UDPsulfoquinovose synthase activity	0.00E+00
6	GO:0000774: adenyl-nucleotide exchange factor activity	1.82E-05
7	GO:0051082: unfolded protein binding	1.16E-04
8	GO:0016884: carbon-nitrogen ligase activity, with glutamine as amido-N-donor	1.82E-04
9	GO:0051087: chaperone binding	2.53E-04
10	GO:0004362: glutathione-disulfide reductase activity	3.66E-04
11	GO:0004585: ornithine carbamoyltransferase activity	3.66E-04
12	GO:0008146: sulfotransferase activity	3.66E-04
13	GO:0004817: cysteine-tRNA ligase activity	3.66E-04
14	GO:0004418: hydroxymethylbilane synthase activity	3.66E-04
15	GO:0016742: hydroxymethyl-, formyl- and related transferase activity	8.59E-04
16	GO:0004853: uroporphyrinogen decarboxylase activity	8.59E-04
17	GO:0004450: isocitrate dehydrogenase (NADP+) activity	8.59E-04
18	GO:0005347: ATP transmembrane transporter activity	8.59E-04
19	GO:0016743: carboxyl- or carbamoyltransferase activity	1.45E-03
20	GO:0004765: shikimate kinase activity	2.11E-03
21	GO:0016668: oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor	2.11E-03
22	GO:0031072: heat shock protein binding	2.25E-03
23	GO:0016987: sigma factor activity	2.83E-03
24	GO:0004252: serine-type endopeptidase activity	3.03E-03
25	GO:0008173: RNA methyltransferase activity	3.68E-03
26	GO:0004525: ribonuclease III activity	4.59E-03
27	GO:0005524: ATP binding	5.54E-03
28	GO:0008266: poly(U) RNA binding	6.59E-03
29	GO:0046914: transition metal ion binding	8.85E-03
30	GO:0003690: double-stranded DNA binding	1.01E-02
31	GO:0042803: protein homodimerization activity	1.09E-02
32	GO:0005507: copper ion binding	1.17E-02
33	GO:0016831: carboxy-lyase activity	1.55E-02
34	GO:0005216: ion channel activity	1.55E-02
35	GO:0016887: ATPase activity	1.80E-02
36	GO:0008565: protein transporter activity	2.34E-02
37	GO:0016597: amino acid binding	2.88E-02
38	GO:0000166: nucleotide binding	3.10E-02
39	GO:0008236: serine-type peptidase activity	3.85E-02
40	GO:0000287: magnesium ion binding	4.28E-02

Rank	GO Term	Adjusted P value
1	GO:0009526: plastid envelope	0.00E+00
2	GO:0055035: plastid thylakoid membrane	0.00E+00
3	GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex	0.00E+00
4	GO:0009507: chloroplast	1.07E-16
5	GO:0009570: chloroplast stroma	1.17E-10
6	GO:0009941: chloroplast envelope	8.44E-10
7	GO:0009535: chloroplast thylakoid membrane	1.23E-06
8	GO:0009536: plastid	1.23E-05
9	GO:0005739: mitochondrion	1.34E-04
10	GO:0009532: plastid stroma	2.53E-04
11	GO:0005759: mitochondrial matrix	3.01E-04
12	GO:0009533: chloroplast stromal thylakoid	8.59E-04
13	GO:0042651: thylakoid membrane	9.30E-04
14	GO:0009534: chloroplast thylakoid	1.24E-03
15	GO:0009706: chloroplast inner membrane	2.73E-03
16	GO:0009840: chloroplastic endopeptidase Clp complex	2.83E-03
17	GO:0010319: stromule	5.29E-03
18	GO:0009579: thylakoid	7.44E-03
19	GO:0048046: apoplast	2.01E-02