Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G090904

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010424: DNA methylation on cytosine within a CG sequence0.00E+00
2GO:0045732: positive regulation of protein catabolic process0.00E+00
3GO:0006334: nucleosome assembly1.58E-12
4GO:0044267: cellular protein metabolic process1.68E-06
5GO:0006260: DNA replication3.71E-06
6GO:0042276: error-prone translesion synthesis5.79E-05
7GO:0009556: microsporogenesis5.79E-05
8GO:0010216: maintenance of DNA methylation5.79E-05
9GO:0030036: actin cytoskeleton organization1.04E-04
10GO:0010069: zygote asymmetric cytokinesis in embryo sac1.49E-04
11GO:0046621: negative regulation of organ growth1.49E-04
12GO:0007276: gamete generation2.64E-04
13GO:0090116: C-5 methylation of cytosine3.96E-04
14GO:0032875: regulation of DNA endoreduplication5.42E-04
15GO:0051302: regulation of cell division7.03E-04
16GO:0008283: cell proliferation8.06E-04
17GO:0006349: regulation of gene expression by genetic imprinting8.79E-04
18GO:0051510: regulation of unidimensional cell growth8.79E-04
19GO:0006457: protein folding1.21E-03
20GO:0090305: nucleic acid phosphodiester bond hydrolysis1.26E-03
21GO:0032508: DNA duplex unwinding2.12E-03
22GO:0009294: DNA mediated transformation2.59E-03
23GO:0001731: formation of translation preinitiation complex2.84E-03
24GO:0042545: cell wall modification2.84E-03
25GO:0006281: DNA repair2.91E-03
26GO:0006094: gluconeogenesis3.11E-03
27GO:0006310: DNA recombination3.39E-03
28GO:0009664: plant-type cell wall organization3.39E-03
29GO:0009910: negative regulation of flower development3.98E-03
30GO:0009414: response to water deprivation4.56E-03
31GO:0006275: regulation of DNA replication5.54E-03
32GO:0006270: DNA replication initiation5.88E-03
33GO:0007049: cell cycle6.23E-03
34GO:0006306: DNA methylation9.65E-03
35GO:0010043: response to zinc ion1.01E-02
36GO:0046686: response to cadmium ion1.19E-02
37GO:0009555: pollen development1.45E-02
38GO:0006396: RNA processing1.65E-02
39GO:0006413: translational initiation1.96E-02
40GO:0006096: glycolytic process3.00E-02
41GO:0009793: embryo development ending in seed dormancy4.93E-02
RankGO TermAdjusted P value
1GO:0010997: anaphase-promoting complex binding0.00E+00
2GO:0046982: protein heterodimerization activity4.44E-10
3GO:0003677: DNA binding4.00E-09
4GO:0030337: DNA polymerase processivity factor activity5.79E-05
5GO:0003906: DNA-(apurinic or apyrimidinic site) lyase activity1.49E-04
6GO:0051082: unfolded protein binding2.01E-04
7GO:0003886: DNA (cytosine-5-)-methyltransferase activity3.96E-04
8GO:0003779: actin binding7.17E-04
9GO:0004518: nuclease activity1.68E-03
10GO:0003678: DNA helicase activity1.68E-03
11GO:0004519: endonuclease activity2.12E-03
12GO:0003743: translation initiation factor activity2.29E-02
13GO:0017111: nucleoside-triphosphatase activity4.28E-02
RankGO TermAdjusted P value
1GO:0000786: nucleosome9.27E-13
2GO:0005694: chromosome2.45E-10
3GO:0005634: nucleus1.56E-07
4GO:0043626: PCNA complex5.79E-05
5GO:0042644: chloroplast nucleoid5.79E-05
6GO:0005730: nucleolus7.06E-04
7GO:0000785: chromatin1.07E-03
8GO:0042555: MCM complex1.26E-03
9GO:0009506: plasmodesma1.58E-03
10GO:0005774: vacuolar membrane2.26E-03
11GO:0016282: eukaryotic 43S preinitiation complex2.84E-03
12GO:0033290: eukaryotic 48S preinitiation complex2.84E-03
13GO:0005852: eukaryotic translation initiation factor 3 complex3.11E-03
14GO:0019013: viral nucleocapsid3.98E-03
15GO:0005737: cytoplasm8.84E-03
16GO:0009579: thylakoid9.73E-03
17GO:0005829: cytosol2.61E-02