co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G090675

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010239: chloroplast mRNA processing	0.00E+00
2	GO:0046506: sulfolipid biosynthetic process	0.00E+00
3	GO:0045087: innate immune response	1.14E-04
4	GO:0006591: ornithine metabolic process	1.80E-04
5	GO:0009658: chloroplast organization	2.18E-04
6	GO:0006364: rRNA processing	3.42E-04
7	GO:0008299: isoprenoid biosynthetic process	3.97E-04
8	GO:0005987: sucrose catabolic process	4.36E-04
9	GO:0030308: negative regulation of cell growth	4.36E-04
10	GO:0019760: glucosinolate metabolic process	7.46E-04
11	GO:0010731: protein glutathionylation	7.46E-04
12	GO:0043067: regulation of programmed cell death	7.46E-04
13	GO:0009231: riboflavin biosynthetic process	7.46E-04
14	GO:0009247: glycolipid biosynthetic process	7.46E-04
15	GO:0000373: Group II intron splicing	1.11E-03
16	GO:0006598: polyamine catabolic process	1.11E-03
17	GO:0010304: PSII associated light-harvesting complex II catabolic process	1.11E-03
18	GO:0019375: galactolipid biosynthetic process	1.11E-03
19	GO:0006098: pentose-phosphate shunt	1.24E-03
20	GO:0016117: carotenoid biosynthetic process	1.75E-03
21	GO:0009306: protein secretion	1.92E-03
22	GO:0000105: histidine biosynthetic process	1.92E-03
23	GO:0009814: defense response, incompatible interaction	2.35E-03
24	GO:0010583: response to cyclopentenone	2.35E-03
25	GO:0006399: tRNA metabolic process	2.83E-03
26	GO:0006221: pyrimidine nucleotide biosynthetic process	3.37E-03
27	GO:0015995: chlorophyll biosynthetic process	3.51E-03
28	GO:0009407: toxin catabolic process	3.93E-03
29	GO:0043085: positive regulation of catalytic activity	4.12E-03
30	GO:0016556: mRNA modification	4.53E-03
31	GO:0016042: lipid catabolic process	5.77E-03
32	GO:0010027: thylakoid membrane organization	7.10E-03
33	GO:0015996: chlorophyll catabolic process	7.15E-03
34	GO:0005982: starch metabolic process	7.15E-03
35	GO:0019252: starch biosynthetic process	7.39E-03
36	GO:0019684: photosynthesis, light reaction	8.61E-03
37	GO:0016036: cellular response to phosphate starvation	9.39E-03
38	GO:0048825: cotyledon development	9.39E-03
39	GO:0010155: regulation of proton transport	9.39E-03
40	GO:0010103: stomatal complex morphogenesis	1.02E-02
41	GO:0010363: regulation of plant-type hypersensitive response	1.10E-02
42	GO:0046777: protein autophosphorylation	1.10E-02
43	GO:0006520: cellular amino acid metabolic process	1.55E-02
44	GO:0009409: response to cold	1.70E-02
45	GO:0009735: response to cytokinin	1.74E-02
46	GO:0006662: glycerol ether metabolic process	1.84E-02
47	GO:0009637: response to blue light	1.94E-02
48	GO:0009790: embryo development	2.04E-02
49	GO:0010114: response to red light	2.15E-02
50	GO:0010218: response to far red light	2.37E-02
51	GO:0000023: maltose metabolic process	2.48E-02
52	GO:0042542: response to hydrogen peroxide	2.83E-02
53	GO:0008652: cellular amino acid biosynthetic process	3.19E-02
54	GO:0009644: response to high light intensity	3.32E-02
55	GO:0009965: leaf morphogenesis	3.70E-02
56	GO:0010207: photosystem II assembly	4.10E-02
57	GO:0044237: cellular metabolic process	4.65E-02
58	GO:0006396: RNA processing	4.65E-02
59	GO:0009737: response to abscisic acid	4.65E-02

Rank	GO Term	Adjusted P value
1	GO:0046507: UDPsulfoquinovose synthase activity	0.00E+00
2	GO:0003919: FMN adenylyltransferase activity	0.00E+00
3	GO:0003879: ATP phosphoribosyltransferase activity	0.00E+00
4	GO:0051743: red chlorophyll catabolite reductase activity	0.00E+00
5	GO:0016817: hydrolase activity, acting on acid anhydrides	3.92E-05
6	GO:0008266: poly(U) RNA binding	1.14E-04
7	GO:0045174: glutathione dehydrogenase (ascorbate) activity	1.80E-04
8	GO:0004585: ornithine carbamoyltransferase activity	1.80E-04
9	GO:0008146: sulfotransferase activity	1.80E-04
10	GO:0033862: UMP kinase activity	1.80E-04
11	GO:0046592: polyamine oxidase activity	4.36E-04
12	GO:0005496: steroid binding	4.36E-04
13	GO:0009041: uridylate kinase activity	7.46E-04
14	GO:0016743: carboxyl- or carbamoyltransferase activity	7.46E-04
15	GO:0033926: glycopeptide alpha-N-acetylgalactosaminidase activity	1.11E-03
16	GO:0004525: ribonuclease III activity	2.35E-03
17	GO:0004575: sucrose alpha-glucosidase activity	2.83E-03
18	GO:0008047: enzyme activator activity	2.83E-03
19	GO:0051082: unfolded protein binding	1.10E-02
20	GO:0008565: protein transporter activity	1.18E-02
21	GO:0031072: heat shock protein binding	1.18E-02
22	GO:0003723: RNA binding	1.40E-02
23	GO:0016597: amino acid binding	1.45E-02
24	GO:0000287: magnesium ion binding	1.63E-02
25	GO:0005525: GTP binding	1.99E-02
26	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	3.32E-02
27	GO:0016779: nucleotidyltransferase activity	4.10E-02
28	GO:0015035: protein disulfide oxidoreductase activity	4.38E-02

Rank	GO Term	Adjusted P value
1	GO:0009513: etioplast	0.00E+00
2	GO:0009537: proplastid	0.00E+00
3	GO:0009507: chloroplast	5.38E-07
4	GO:0009535: chloroplast thylakoid membrane	2.27E-06
5	GO:0010319: stromule	1.46E-04
6	GO:0009509: chromoplast	1.80E-04
7	GO:0009579: thylakoid	2.63E-04
8	GO:0009570: chloroplast stroma	5.86E-04
9	GO:0019898: extrinsic component of membrane	1.92E-03
10	GO:0009941: chloroplast envelope	2.14E-03
11	GO:0031977: thylakoid lumen	2.16E-03
12	GO:0009501: amyloplast	2.35E-03
13	GO:0009654: photosystem II oxygen evolving complex	2.35E-03
14	GO:0009543: chloroplast thylakoid lumen	6.45E-03
15	GO:0019013: viral nucleocapsid	1.10E-02
16	GO:0009706: chloroplast inner membrane	1.36E-02
17	GO:0009523: photosystem II	1.74E-02
18	GO:0009534: chloroplast thylakoid	3.19E-02