co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G088974

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0043966: histone H3 acetylation	0.00E+00
2	GO:0000578: embryonic axis specification	0.00E+00
3	GO:0010288: response to lead ion	0.00E+00
4	GO:0060148: positive regulation of posttranscriptional gene silencing	0.00E+00
5	GO:0032509: endosome transport via multivesicular body sorting pathway	0.00E+00
6	GO:0045694: regulation of embryo sac egg cell differentiation	0.00E+00
7	GO:0016571: histone methylation	5.87E-05
8	GO:0009410: response to xenobiotic stimulus	1.91E-04
9	GO:0019427: acetyl-CoA biosynthetic process from acetate	4.80E-04
10	GO:0007219: Notch signaling pathway	4.80E-04
11	GO:0003002: regionalization	4.80E-04
12	GO:0030307: positive regulation of cell growth	4.80E-04
13	GO:0040007: growth	5.05E-04
14	GO:0016579: protein deubiquitination	7.23E-04
15	GO:0034389: lipid particle organization	1.12E-03
16	GO:0010109: regulation of photosynthesis	1.12E-03
17	GO:0042547: cell wall modification involved in multidimensional cell growth	1.12E-03
18	GO:0006083: acetate metabolic process	1.12E-03
19	GO:0043687: post-translational protein modification	1.37E-03
20	GO:0010152: pollen maturation	1.88E-03
21	GO:0006491: N-glycan processing	1.88E-03
22	GO:0007094: mitotic spindle assembly checkpoint	1.88E-03
23	GO:0034605: cellular response to heat	1.88E-03
24	GO:0006168: adenine salvage	1.88E-03
25	GO:0009646: response to absence of light	1.88E-03
26	GO:0008654: phospholipid biosynthetic process	2.72E-03
27	GO:0016485: protein processing	2.72E-03
28	GO:0009867: jasmonic acid mediated signaling pathway	3.29E-03
29	GO:0006461: protein complex assembly	3.72E-03
30	GO:0033044: regulation of chromosome organization	3.72E-03
31	GO:0070588: calcium ion transmembrane transport	3.72E-03
32	GO:0010072: primary shoot apical meristem specification	3.72E-03
33	GO:0045893: positive regulation of transcription, DNA-templated	3.83E-03
34	GO:0019432: triglyceride biosynthetic process	4.81E-03
35	GO:0051276: chromosome organization	4.81E-03
36	GO:0045132: meiotic chromosome segregation	4.81E-03
37	GO:0009913: epidermal cell differentiation	4.81E-03
38	GO:0006561: proline biosynthetic process	4.81E-03
39	GO:0006325: chromatin organization	5.98E-03
40	GO:0010025: wax biosynthetic process	5.98E-03
41	GO:0006367: transcription initiation from RNA polymerase II promoter	5.98E-03
42	GO:0007155: cell adhesion	5.98E-03
43	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	5.98E-03
44	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	5.98E-03
45	GO:0030422: production of siRNA involved in RNA interference	5.98E-03
46	GO:0009615: response to virus	7.27E-03
47	GO:0030245: cellulose catabolic process	7.27E-03
48	GO:0005985: sucrose metabolic process	7.27E-03
49	GO:0048449: floral organ formation	7.27E-03
50	GO:0000741: karyogamy	7.27E-03
51	GO:0010074: maintenance of meristem identity	7.27E-03
52	GO:0010310: regulation of hydrogen peroxide metabolic process	7.27E-03
53	GO:0016573: histone acetylation	8.62E-03
54	GO:0048765: root hair cell differentiation	8.62E-03
55	GO:0006002: fructose 6-phosphate metabolic process	8.62E-03
56	GO:0010029: regulation of seed germination	8.62E-03
57	GO:0042138: meiotic DNA double-strand break formation	8.62E-03
58	GO:0010015: root morphogenesis	8.62E-03
59	GO:0010118: stomatal movement	1.01E-02
60	GO:0008284: positive regulation of cell proliferation	1.01E-02
61	GO:0010051: xylem and phloem pattern formation	1.01E-02
62	GO:0009640: photomorphogenesis	1.02E-02
63	GO:0016567: protein ubiquitination	1.07E-02
64	GO:0009116: nucleoside metabolic process	1.16E-02
65	GO:0006312: mitotic recombination	1.16E-02
66	GO:0045010: actin nucleation	1.16E-02
67	GO:0010048: vernalization response	1.16E-02
68	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	1.32E-02
69	GO:0019915: lipid storage	1.32E-02
70	GO:0007034: vacuolar transport	1.49E-02
71	GO:0007033: vacuole organization	1.49E-02
72	GO:0006406: mRNA export from nucleus	1.66E-02
73	GO:0048364: root development	1.69E-02
74	GO:0006636: unsaturated fatty acid biosynthetic process	1.85E-02
75	GO:0010162: seed dormancy process	1.85E-02
76	GO:0006446: regulation of translational initiation	1.85E-02
77	GO:0007131: reciprocal meiotic recombination	1.85E-02
78	GO:0016049: cell growth	2.04E-02
79	GO:0050826: response to freezing	2.04E-02
80	GO:0001731: formation of translation preinitiation complex	2.04E-02
81	GO:0007062: sister chromatid cohesion	2.04E-02
82	GO:0006261: DNA-dependent DNA replication	2.04E-02
83	GO:0006972: hyperosmotic response	2.04E-02
84	GO:0034968: histone lysine methylation	2.23E-02
85	GO:0009749: response to glucose	2.23E-02
86	GO:0000902: cell morphogenesis	2.23E-02
87	GO:0042023: DNA endoreduplication	2.23E-02
88	GO:0009739: response to gibberellin	2.44E-02
89	GO:0009966: regulation of signal transduction	2.44E-02
90	GO:0006612: protein targeting to membrane	2.65E-02
91	GO:0010182: sugar mediated signaling pathway	2.86E-02
92	GO:0010363: regulation of plant-type hypersensitive response	2.86E-02
93	GO:0010090: trichome morphogenesis	2.86E-02
94	GO:0035304: regulation of protein dephosphorylation	2.86E-02
95	GO:0009793: embryo development ending in seed dormancy	2.92E-02
96	GO:0031348: negative regulation of defense response	3.08E-02
97	GO:0048367: shoot system development	3.08E-02
98	GO:0006888: ER to Golgi vesicle-mediated transport	3.08E-02
99	GO:0000278: mitotic cell cycle	3.08E-02
100	GO:0009553: embryo sac development	3.08E-02
101	GO:0009751: response to salicylic acid	3.31E-02
102	GO:0035556: intracellular signal transduction	3.55E-02
103	GO:0009845: seed germination	3.55E-02
104	GO:0010119: regulation of stomatal movement	3.79E-02
105	GO:0009933: meristem structural organization	4.03E-02
106	GO:0000165: MAPK cascade	4.03E-02
107	GO:0009560: embryo sac egg cell differentiation	4.29E-02
108	GO:0048193: Golgi vesicle transport	4.54E-02
109	GO:0007049: cell cycle	4.54E-02

Rank	GO Term	Adjusted P value
1	GO:0032791: lead ion binding	0.00E+00
2	GO:0010484: H3 histone acetyltransferase activity	0.00E+00
3	GO:0003881: CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity	0.00E+00
4	GO:0016208: AMP binding	4.80E-04
5	GO:0019905: syntaxin binding	4.80E-04
6	GO:0003968: RNA-directed 5'-3' RNA polymerase activity	4.80E-04
7	GO:0070300: phosphatidic acid binding	4.80E-04
8	GO:0008430: selenium binding	1.12E-03
9	GO:0004559: alpha-mannosidase activity	1.12E-03
10	GO:0008143: poly(A) binding	1.12E-03
11	GO:0004350: glutamate-5-semialdehyde dehydrogenase activity	1.12E-03
12	GO:0003999: adenine phosphoribosyltransferase activity	1.88E-03
13	GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	1.88E-03
14	GO:0016780: phosphotransferase activity, for other substituted phosphate groups	1.88E-03
15	GO:0000062: fatty-acyl-CoA binding	1.88E-03
16	GO:0003987: acetate-CoA ligase activity	1.88E-03
17	GO:0005388: calcium-transporting ATPase activity	2.72E-03
18	GO:0019199: transmembrane receptor protein kinase activity	3.72E-03
19	GO:0004402: histone acetyltransferase activity	4.81E-03
20	GO:0004143: diacylglycerol kinase activity	5.98E-03
21	GO:0008810: cellulase activity	5.98E-03
22	GO:0019904: protein domain specific binding	7.27E-03
23	GO:0043022: ribosome binding	7.27E-03
24	GO:0004843: thiol-dependent ubiquitin-specific protease activity	8.62E-03
25	GO:0046873: metal ion transmembrane transporter activity	1.01E-02
26	GO:0003951: NAD+ kinase activity	1.01E-02
27	GO:0003872: 6-phosphofructokinase activity	1.01E-02
28	GO:0008378: galactosyltransferase activity	1.16E-02
29	GO:0031418: L-ascorbic acid binding	1.16E-02
30	GO:0003690: double-stranded DNA binding	1.32E-02
31	GO:0018024: histone-lysine N-methyltransferase activity	1.32E-02
32	GO:0042803: protein homodimerization activity	1.61E-02
33	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.66E-02
34	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.69E-02
35	GO:0016651: oxidoreductase activity, acting on NAD(P)H	2.04E-02
36	GO:0008080: N-acetyltransferase activity	2.23E-02
37	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	2.23E-02
38	GO:0019829: cation-transporting ATPase activity	2.44E-02
39	GO:0008137: NADH dehydrogenase (ubiquinone) activity	2.86E-02
40	GO:0005509: calcium ion binding	2.99E-02
41	GO:0031072: heat shock protein binding	3.08E-02
42	GO:0042393: histone binding	3.31E-02
43	GO:0003743: translation initiation factor activity	3.72E-02
44	GO:0051539: 4 iron, 4 sulfur cluster binding	4.29E-02
45	GO:0010181: FMN binding	4.80E-02
46	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	4.80E-02

Rank	GO Term	Adjusted P value
1	GO:0010494: cytoplasmic stress granule	0.00E+00
2	GO:0005673: transcription factor TFIIE complex	0.00E+00
3	GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)	4.80E-04
4	GO:0000123: histone acetyltransferase complex	1.12E-03
5	GO:0000776: kinetochore	2.72E-03
6	GO:0005801: cis-Golgi network	4.81E-03
7	GO:0031011: Ino80 complex	4.81E-03
8	GO:0009524: phragmoplast	6.23E-03
9	GO:0005945: 6-phosphofructokinase complex	8.62E-03
10	GO:0005681: spliceosomal complex	1.32E-02
11	GO:0033290: eukaryotic 48S preinitiation complex	2.04E-02
12	GO:0016282: eukaryotic 43S preinitiation complex	2.04E-02
13	GO:0005794: Golgi apparatus	2.16E-02
14	GO:0005852: eukaryotic translation initiation factor 3 complex	2.23E-02
15	GO:0009504: cell plate	2.23E-02
16	GO:0005783: endoplasmic reticulum	2.72E-02
17	GO:0005819: spindle	3.08E-02
18	GO:0005829: cytosol	3.45E-02
19	GO:0005635: nuclear envelope	3.55E-02
20	GO:0000139: Golgi membrane	4.80E-02