GO Enrichment Analysis of Co-expressed Genes with
GRMZM2G088162
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042273: ribosomal large subunit biogenesis | 0.00E+00 |
| 2 | GO:0043137: DNA replication, removal of RNA primer | 0.00E+00 |
| 3 | GO:0006378: mRNA polyadenylation | 4.21E-05 |
| 4 | GO:0042254: ribosome biogenesis | 1.41E-04 |
| 5 | GO:0001510: RNA methylation | 1.92E-04 |
| 6 | GO:0042256: mature ribosome assembly | 2.99E-04 |
| 7 | GO:0046907: intracellular transport | 4.12E-04 |
| 8 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 9.62E-04 |
| 9 | GO:0006260: DNA replication | 1.14E-03 |
| 10 | GO:0006284: base-excision repair | 1.29E-03 |
| 11 | GO:0009116: nucleoside metabolic process | 1.29E-03 |
| 12 | GO:0006974: cellular response to DNA damage stimulus | 1.46E-03 |
| 13 | GO:0001522: pseudouridine synthesis | 1.64E-03 |
| 14 | GO:0006406: mRNA export from nucleus | 1.82E-03 |
| 15 | GO:0010197: polar nucleus fusion | 2.00E-03 |
| 16 | GO:0006606: protein import into nucleus | 2.19E-03 |
| 17 | GO:0016126: sterol biosynthetic process | 2.38E-03 |
| 18 | GO:0009553: embryo sac development | 3.25E-03 |
| 19 | GO:0006950: response to stress | 3.43E-03 |
| 20 | GO:0007049: cell cycle | 4.75E-03 |
| 21 | GO:0009220: pyrimidine ribonucleotide biosynthetic process | 5.01E-03 |
| 22 | GO:0000398: mRNA splicing, via spliceosome | 7.95E-03 |
| 23 | GO:0006413: translational initiation | 1.48E-02 |
| 24 | GO:0006633: fatty acid biosynthetic process | 1.82E-02 |
| 25 | GO:0006281: DNA repair | 2.13E-02 |
| 26 | GO:0006364: rRNA processing | 2.51E-02 |
| 27 | GO:0009793: embryo development ending in seed dormancy | 3.73E-02 |
| 28 | GO:0006351: transcription, DNA-templated | 4.96E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008409: 5'-3' exonuclease activity | 0.00E+00 |
| 2 | GO:0043023: ribosomal large subunit binding | 4.21E-05 |
| 3 | GO:0000248: C-5 sterol desaturase activity | 4.21E-05 |
| 4 | GO:0017108: 5'-flap endonuclease activity | 4.21E-05 |
| 5 | GO:0030515: snoRNA binding | 2.99E-04 |
| 6 | GO:0003729: mRNA binding | 5.34E-04 |
| 7 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 5.63E-04 |
| 8 | GO:0043022: ribosome binding | 8.11E-04 |
| 9 | GO:0004518: nuclease activity | 1.29E-03 |
| 10 | GO:0031418: L-ascorbic acid binding | 1.29E-03 |
| 11 | GO:0004519: endonuclease activity | 1.64E-03 |
| 12 | GO:0004527: exonuclease activity | 2.00E-03 |
| 13 | GO:0005506: iron ion binding | 8.93E-03 |
| 14 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 9.95E-03 |
| 15 | GO:0016788: hydrolase activity, acting on ester bonds | 1.48E-02 |
| 16 | GO:0003743: translation initiation factor activity | 1.73E-02 |
| 17 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 2.41E-02 |
| 18 | GO:0000287: magnesium ion binding | 2.51E-02 |
| 19 | GO:0003677: DNA binding | 2.95E-02 |
| 20 | GO:0017111: nucleoside-triphosphatase activity | 3.23E-02 |
| 21 | GO:0003676: nucleic acid binding | 3.52E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000418: DNA-directed RNA polymerase IV complex | 5.67E-06 |
| 2 | GO:0005665: DNA-directed RNA polymerase II, core complex | 8.30E-06 |
| 3 | GO:0005849: mRNA cleavage factor complex | 4.21E-05 |
| 4 | GO:0072588: box H/ACA RNP complex | 4.21E-05 |
| 5 | GO:0017053: transcriptional repressor complex | 4.21E-05 |
| 6 | GO:0005730: nucleolus | 3.06E-04 |
| 7 | GO:0015030: Cajal body | 6.67E-04 |
| 8 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 8.11E-04 |
| 9 | GO:0005681: spliceosomal complex | 1.46E-03 |
| 10 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 2.38E-03 |
| 11 | GO:0005654: nucleoplasm | 2.58E-03 |
| 12 | GO:0019013: viral nucleocapsid | 3.01E-03 |
| 13 | GO:0005743: mitochondrial inner membrane | 9.61E-03 |