co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G087598

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:2000030: regulation of response to red or far red light	0.00E+00
2	GO:0035970: peptidyl-threonine dephosphorylation	0.00E+00
3	GO:0010269: response to selenium ion	0.00E+00
4	GO:0018283: iron incorporation into metallo-sulfur cluster	0.00E+00
5	GO:0010196: nonphotochemical quenching	6.35E-09
6	GO:0010207: photosystem II assembly	1.10E-07
7	GO:0006364: rRNA processing	2.44E-06
8	GO:0009657: plastid organization	3.19E-06
9	GO:0009773: photosynthetic electron transport in photosystem I	5.98E-06
10	GO:0015979: photosynthesis	2.14E-05
11	GO:0016117: carotenoid biosynthetic process	2.42E-05
12	GO:0019761: glucosinolate biosynthetic process	2.74E-05
13	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	7.57E-05
14	GO:0001887: selenium compound metabolic process	8.47E-05
15	GO:0006534: cysteine metabolic process	8.47E-05
16	GO:0071482: cellular response to light stimulus	8.47E-05
17	GO:0006021: inositol biosynthetic process	8.47E-05
18	GO:0043085: positive regulation of catalytic activity	9.74E-05
19	GO:0010155: regulation of proton transport	2.11E-04
20	GO:0010236: plastoquinone biosynthetic process	2.14E-04
21	GO:0035304: regulation of protein dephosphorylation	2.72E-04
22	GO:0005986: sucrose biosynthetic process	3.74E-04
23	GO:0045454: cell redox homeostasis	5.50E-04
24	GO:0006790: sulfur compound metabolic process	5.58E-04
25	GO:0006879: cellular iron ion homeostasis	5.58E-04
26	GO:0006662: glycerol ether metabolic process	5.95E-04
27	GO:0019344: cysteine biosynthetic process	6.44E-04
28	GO:0009637: response to blue light	6.44E-04
29	GO:0010114: response to red light	7.50E-04
30	GO:0010218: response to far red light	8.64E-04
31	GO:0016311: dephosphorylation	1.05E-03
32	GO:0010206: photosystem II repair	1.23E-03
33	GO:0034660: ncRNA metabolic process	1.23E-03
34	GO:0055072: iron ion homeostasis	1.23E-03
35	GO:0019853: L-ascorbic acid biosynthetic process	1.48E-03
36	GO:0000302: response to reactive oxygen species	2.02E-03
37	GO:0010039: response to iron ion	2.60E-03
38	GO:0009765: photosynthesis, light harvesting	2.60E-03
39	GO:0010027: thylakoid membrane organization	2.63E-03
40	GO:0046854: phosphatidylinositol phosphorylation	2.92E-03
41	GO:0042631: cellular response to water deprivation	2.92E-03
42	GO:0006098: pentose-phosphate shunt	3.43E-03
43	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	3.43E-03
44	GO:0006636: unsaturated fatty acid biosynthetic process	3.62E-03
45	GO:0018298: protein-chromophore linkage	4.75E-03
46	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	4.75E-03
47	GO:0010103: stomatal complex morphogenesis	5.14E-03
48	GO:0046777: protein autophosphorylation	5.55E-03
49	GO:0009902: chloroplast relocation	7.77E-03
50	GO:0009073: aromatic amino acid family biosynthetic process	9.23E-03
51	GO:0016226: iron-sulfur cluster assembly	1.13E-02
52	GO:0000023: maltose metabolic process	1.24E-02
53	GO:0009744: response to sucrose	1.41E-02
54	GO:0009624: response to nematode	1.59E-02
55	GO:0015995: chlorophyll biosynthetic process	1.59E-02
56	GO:0006812: cation transport	1.59E-02
57	GO:0009644: response to high light intensity	1.65E-02
58	GO:0022900: electron transport chain	1.72E-02
59	GO:0008152: metabolic process	2.60E-02
60	GO:0019252: starch biosynthetic process	2.68E-02
61	GO:0009409: response to cold	2.69E-02
62	GO:0080167: response to karrikin	3.31E-02

Rank	GO Term	Adjusted P value
1	GO:0010357: homogentisate solanesyltransferase activity	0.00E+00
2	GO:0009496: plastoquinol--plastocyanin reductase activity	0.00E+00
3	GO:0015038: glutathione disulfide oxidoreductase activity	0.00E+00
4	GO:0008934: inositol monophosphate 1-phosphatase activity	0.00E+00
5	GO:0010356: homogentisate geranylgeranyltransferase activity	0.00E+00
6	GO:0010355: homogentisate farnesyltransferase activity	0.00E+00
7	GO:0010347: L-galactose-1-phosphate phosphatase activity	0.00E+00
8	GO:0009000: selenocysteine lyase activity	0.00E+00
9	GO:0050307: sucrose-phosphate phosphatase activity	8.47E-05
10	GO:0004750: ribulose-phosphate 3-epimerase activity	8.47E-05
11	GO:0016679: oxidoreductase activity, acting on diphenols and related substances as donors	8.47E-05
12	GO:0031071: cysteine desulfurase activity	8.47E-05
13	GO:0015035: protein disulfide oxidoreductase activity	1.50E-04
14	GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity	2.14E-04
15	GO:0004176: ATP-dependent peptidase activity	3.74E-04
16	GO:0004659: prenyltransferase activity	5.58E-04
17	GO:0016857: racemase and epimerase activity, acting on carbohydrates and derivatives	7.61E-04
18	GO:0008121: ubiquinol-cytochrome-c reductase activity	1.23E-03
19	GO:0008047: enzyme activator activity	1.48E-03
20	GO:0003725: double-stranded RNA binding	2.02E-03
21	GO:0003993: acid phosphatase activity	2.92E-03
22	GO:0003824: catalytic activity	3.77E-03
23	GO:0016168: chlorophyll binding	4.75E-03
24	GO:0015297: antiporter activity	5.55E-03
25	GO:0051537: 2 iron, 2 sulfur cluster binding	5.98E-03
26	GO:0016853: isomerase activity	6.90E-03
27	GO:0010181: FMN binding	9.23E-03
28	GO:0016791: phosphatase activity	1.30E-02
29	GO:0051536: iron-sulfur cluster binding	2.39E-02
30	GO:0009055: electron carrier activity	3.12E-02
31	GO:0050662: coenzyme binding	3.47E-02
32	GO:0030170: pyridoxal phosphate binding	3.72E-02
33	GO:0000287: magnesium ion binding	4.69E-02

Rank	GO Term	Adjusted P value
1	GO:0009571: proplastid stroma	0.00E+00
2	GO:0009783: photosystem II antenna complex	0.00E+00
3	GO:0009507: chloroplast	3.24E-09
4	GO:0009579: thylakoid	6.35E-08
5	GO:0009534: chloroplast thylakoid	2.20E-06
6	GO:0010287: plastoglobule	7.61E-05
7	GO:0009517: PSII associated light-harvesting complex II	8.47E-05
8	GO:0042651: thylakoid membrane	1.12E-04
9	GO:0009535: chloroplast thylakoid membrane	1.44E-04
10	GO:0009533: chloroplast stromal thylakoid	2.14E-04
11	GO:0009522: photosystem I	2.72E-04
12	GO:0009538: photosystem I reaction center	5.58E-04
13	GO:0009941: chloroplast envelope	1.30E-03
14	GO:0009570: chloroplast stroma	1.41E-03
15	GO:0009543: chloroplast thylakoid lumen	3.26E-03
16	GO:0010319: stromule	1.08E-02
17	GO:0031977: thylakoid lumen	1.13E-02