co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G083459

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042906: xanthine transport	0.00E+00
2	GO:0060148: positive regulation of posttranscriptional gene silencing	0.00E+00
3	GO:0015857: uracil transport	0.00E+00
4	GO:0032509: endosome transport via multivesicular body sorting pathway	0.00E+00
5	GO:0006144: purine nucleobase metabolic process	0.00E+00
6	GO:0045694: regulation of embryo sac egg cell differentiation	0.00E+00
7	GO:0000578: embryonic axis specification	0.00E+00
8	GO:0090630: activation of GTPase activity	0.00E+00
9	GO:0015791: polyol transport	0.00E+00
10	GO:0045022: early endosome to late endosome transport	0.00E+00
11	GO:0019628: urate catabolic process	0.00E+00
12	GO:0010222: stem vascular tissue pattern formation	0.00E+00
13	GO:0031668: cellular response to extracellular stimulus	0.00E+00
14	GO:0015695: organic cation transport	0.00E+00
15	GO:0015720: allantoin transport	0.00E+00
16	GO:0010288: response to lead ion	0.00E+00
17	GO:0009103: lipopolysaccharide biosynthetic process	0.00E+00
18	GO:0071705: nitrogen compound transport	0.00E+00
19	GO:0010119: regulation of stomatal movement	5.02E-04
20	GO:0006913: nucleocytoplasmic transport	9.80E-04
21	GO:0006367: transcription initiation from RNA polymerase II promoter	1.40E-03
22	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.40E-03
23	GO:0051512: positive regulation of unidimensional cell growth	1.42E-03
24	GO:0030307: positive regulation of cell growth	1.42E-03
25	GO:2000280: regulation of root development	1.42E-03
26	GO:0010587: miRNA catabolic process	1.42E-03
27	GO:0006370: 7-methylguanosine mRNA capping	1.42E-03
28	GO:0009787: regulation of abscisic acid-activated signaling pathway	1.42E-03
29	GO:0009968: negative regulation of signal transduction	1.42E-03
30	GO:0019427: acetyl-CoA biosynthetic process from acetate	1.42E-03
31	GO:0007219: Notch signaling pathway	1.42E-03
32	GO:0043157: response to cation stress	1.42E-03
33	GO:0098655: cation transmembrane transport	1.42E-03
34	GO:0072488: ammonium transmembrane transport	1.42E-03
35	GO:0080141: regulation of jasmonic acid biosynthetic process	1.42E-03
36	GO:0003002: regionalization	1.42E-03
37	GO:0007031: peroxisome organization	1.88E-03
38	GO:0040007: growth	2.41E-03
39	GO:0006886: intracellular protein transport	2.65E-03
40	GO:0006011: UDP-glucose metabolic process	3.19E-03
41	GO:0006083: acetate metabolic process	3.19E-03
42	GO:0034389: lipid particle organization	3.19E-03
43	GO:0071577: zinc II ion transmembrane transport	3.19E-03
44	GO:0010109: regulation of photosynthesis	3.19E-03
45	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	4.59E-03
46	GO:0006471: protein ADP-ribosylation	5.42E-03
47	GO:0048831: regulation of shoot system development	5.42E-03
48	GO:0010152: pollen maturation	5.42E-03
49	GO:0046836: glycolipid transport	5.42E-03
50	GO:0006491: N-glycan processing	5.42E-03
51	GO:0010227: floral organ abscission	5.42E-03
52	GO:0007032: endosome organization	5.42E-03
53	GO:0007264: small GTPase mediated signal transduction	6.10E-03
54	GO:0046470: phosphatidylcholine metabolic process	8.04E-03
55	GO:0016485: protein processing	8.04E-03
56	GO:0006790: sulfur compound metabolic process	8.04E-03
57	GO:0035434: copper ion transmembrane transport	8.04E-03
58	GO:0006401: RNA catabolic process	8.04E-03
59	GO:0006750: glutathione biosynthetic process	8.04E-03
60	GO:0015031: protein transport	1.02E-02
61	GO:0070588: calcium ion transmembrane transport	1.10E-02
62	GO:0010072: primary shoot apical meristem specification	1.10E-02
63	GO:0033044: regulation of chromosome organization	1.10E-02
64	GO:0034755: iron ion transmembrane transport	1.10E-02
65	GO:0009913: epidermal cell differentiation	1.43E-02
66	GO:0009410: response to xenobiotic stimulus	1.43E-02
67	GO:0006561: proline biosynthetic process	1.43E-02
68	GO:0019432: triglyceride biosynthetic process	1.43E-02
69	GO:0051276: chromosome organization	1.43E-02
70	GO:0045132: meiotic chromosome segregation	1.43E-02
71	GO:0006783: heme biosynthetic process	1.43E-02
72	GO:0006470: protein dephosphorylation	1.55E-02
73	GO:0009867: jasmonic acid mediated signaling pathway	1.58E-02
74	GO:0009751: response to salicylic acid	1.75E-02
75	GO:0009738: abscisic acid-activated signaling pathway	1.75E-02
76	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	1.78E-02
77	GO:0006084: acetyl-CoA metabolic process	1.78E-02
78	GO:0033014: tetrapyrrole biosynthetic process	1.78E-02
79	GO:0016925: protein sumoylation	1.78E-02
80	GO:0030422: production of siRNA involved in RNA interference	1.78E-02
81	GO:0006325: chromatin organization	1.78E-02
82	GO:0010025: wax biosynthetic process	1.78E-02
83	GO:0007155: cell adhesion	1.78E-02
84	GO:0010205: photoinhibition	1.78E-02
85	GO:0015914: phospholipid transport	1.78E-02
86	GO:0016132: brassinosteroid biosynthetic process	1.78E-02
87	GO:0009845: seed germination	1.93E-02
88	GO:0010310: regulation of hydrogen peroxide metabolic process	2.17E-02
89	GO:0009615: response to virus	2.17E-02
90	GO:0005985: sucrose metabolic process	2.17E-02
91	GO:0009628: response to abiotic stimulus	2.17E-02
92	GO:0048449: floral organ formation	2.17E-02
93	GO:0000741: karyogamy	2.17E-02
94	GO:0010074: maintenance of meristem identity	2.17E-02
95	GO:0006012: galactose metabolic process	2.17E-02
96	GO:0016567: protein ubiquitination	2.29E-02
97	GO:0000165: MAPK cascade	2.31E-02
98	GO:0015977: carbon fixation	2.59E-02
99	GO:0048765: root hair cell differentiation	2.59E-02
100	GO:0006002: fructose 6-phosphate metabolic process	2.59E-02
101	GO:0009072: aromatic amino acid family metabolic process	2.59E-02
102	GO:0010029: regulation of seed germination	2.59E-02
103	GO:0042138: meiotic DNA double-strand break formation	2.59E-02
104	GO:0010118: stomatal movement	3.03E-02
105	GO:0008284: positive regulation of cell proliferation	3.03E-02
106	GO:0010051: xylem and phloem pattern formation	3.03E-02
107	GO:0006826: iron ion transport	3.03E-02
108	GO:0016192: vesicle-mediated transport	3.10E-02
109	GO:0009860: pollen tube growth	3.45E-02
110	GO:0006499: N-terminal protein myristoylation	3.49E-02
111	GO:0045010: actin nucleation	3.49E-02
112	GO:0006312: mitotic recombination	3.49E-02
113	GO:0042732: D-xylose metabolic process	3.49E-02
114	GO:0009816: defense response to bacterium, incompatible interaction	3.49E-02
115	GO:0007165: signal transduction	3.61E-02
116	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	3.98E-02
117	GO:0006779: porphyrin-containing compound biosynthetic process	3.98E-02
118	GO:0019915: lipid storage	3.98E-02
119	GO:0009408: response to heat	4.23E-02
120	GO:0009414: response to water deprivation	4.39E-02
121	GO:0016571: histone methylation	4.50E-02
122	GO:0035335: peptidyl-tyrosine dephosphorylation	4.50E-02
123	GO:0007034: vacuolar transport	4.50E-02
124	GO:0046854: phosphatidylinositol phosphorylation	4.50E-02
125	GO:0006661: phosphatidylinositol biosynthetic process	4.50E-02
126	GO:0016042: lipid catabolic process	4.50E-02
127	GO:0007033: vacuole organization	4.50E-02

Rank	GO Term	Adjusted P value
1	GO:0004484: mRNA guanylyltransferase activity	0.00E+00
2	GO:0010175: sphingosine transmembrane transporter activity	0.00E+00
3	GO:0009918: sterol delta7 reductase activity	0.00E+00
4	GO:0008690: 3-deoxy-manno-octulosonate cytidylyltransferase activity	0.00E+00
5	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	0.00E+00
6	GO:0004651: polynucleotide 5'-phosphatase activity	0.00E+00
7	GO:0032791: lead ion binding	0.00E+00
8	GO:0005274: allantoin uptake transmembrane transporter activity	0.00E+00
9	GO:0015505: uracil:cation symporter activity	0.00E+00
10	GO:0042907: xanthine transmembrane transporter activity	0.00E+00
11	GO:0004846: urate oxidase activity	0.00E+00
12	GO:0008430: selenium binding	5.70E-05
13	GO:0016881: acid-amino acid ligase activity	1.08E-03
14	GO:0035299: inositol pentakisphosphate 2-kinase activity	1.42E-03
15	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	1.42E-03
16	GO:0003968: RNA-directed 5'-3' RNA polymerase activity	1.42E-03
17	GO:0070300: phosphatidic acid binding	1.42E-03
18	GO:0004363: glutathione synthase activity	1.42E-03
19	GO:0016208: AMP binding	1.42E-03
20	GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity	1.42E-03
21	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	1.42E-03
22	GO:0015210: uracil transmembrane transporter activity	1.42E-03
23	GO:0004197: cysteine-type endopeptidase activity	1.88E-03
24	GO:0046873: metal ion transmembrane transporter activity	3.04E-03
25	GO:0004350: glutamate-5-semialdehyde dehydrogenase activity	3.19E-03
26	GO:0005385: zinc ion transmembrane transporter activity	3.19E-03
27	GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity	3.19E-03
28	GO:0004559: alpha-mannosidase activity	3.19E-03
29	GO:0019204: obsolete nucleotide phosphatase activity	3.19E-03
30	GO:0004325: ferrochelatase activity	3.19E-03
31	GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity	3.19E-03
32	GO:0031418: L-ascorbic acid binding	3.78E-03
33	GO:0000062: fatty-acyl-CoA binding	5.42E-03
34	GO:0051861: glycolipid binding	5.42E-03
35	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	5.42E-03
36	GO:0003987: acetate-CoA ligase activity	5.42E-03
37	GO:0004630: phospholipase D activity	5.42E-03
38	GO:0017089: glycolipid transporter activity	5.42E-03
39	GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	5.42E-03
40	GO:0004602: glutathione peroxidase activity	5.42E-03
41	GO:0052692: raffinose alpha-galactosidase activity	5.42E-03
42	GO:0070569: uridylyltransferase activity	8.04E-03
43	GO:0005375: copper ion transmembrane transporter activity	8.04E-03
44	GO:0008964: phosphoenolpyruvate carboxylase activity	8.04E-03
45	GO:0005388: calcium-transporting ATPase activity	8.04E-03
46	GO:0048040: UDP-glucuronate decarboxylase activity	1.10E-02
47	GO:0003978: UDP-glucose 4-epimerase activity	1.10E-02
48	GO:0005381: iron ion transmembrane transporter activity	1.10E-02
49	GO:0008536: Ran GTPase binding	1.43E-02
50	GO:0019789: SUMO transferase activity	1.43E-02
51	GO:0031072: heat shock protein binding	1.58E-02
52	GO:0004143: diacylglycerol kinase activity	1.78E-02
53	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.94E-02
54	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.17E-02
55	GO:0019904: protein domain specific binding	2.17E-02
56	GO:0004722: protein serine/threonine phosphatase activity	2.93E-02
57	GO:0003872: 6-phosphofructokinase activity	3.03E-02
58	GO:0003951: NAD+ kinase activity	3.03E-02
59	GO:0004190: aspartic-type endopeptidase activity	3.45E-02
60	GO:0004707: MAP kinase activity	3.98E-02
61	GO:0043531: ADP binding	3.98E-02
62	GO:0003690: double-stranded DNA binding	3.98E-02
63	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	3.98E-02
64	GO:0016874: ligase activity	4.22E-02
65	GO:0043169: cation binding	4.25E-02
66	GO:0004842: ubiquitin-protein transferase activity	4.78E-02
67	GO:0016791: phosphatase activity	4.83E-02

Rank	GO Term	Adjusted P value
1	GO:0005673: transcription factor TFIIE complex	0.00E+00
2	GO:0010009: cytoplasmic side of endosome membrane	0.00E+00
3	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	0.00E+00
4	GO:0005769: early endosome	1.42E-03
5	GO:0031307: integral component of mitochondrial outer membrane	1.42E-03
6	GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)	1.42E-03
7	GO:0005886: plasma membrane	2.67E-03
8	GO:0005669: transcription factor TFIID complex	3.19E-03
9	GO:0030176: integral component of endoplasmic reticulum membrane	3.19E-03
10	GO:0030136: clathrin-coated vesicle	8.04E-03
11	GO:0031969: chloroplast membrane	8.04E-03
12	GO:0000323: lytic vacuole	1.10E-02
13	GO:0005789: endoplasmic reticulum membrane	1.18E-02
14	GO:0005771: multivesicular body	1.43E-02
15	GO:0005945: 6-phosphofructokinase complex	2.59E-02
16	GO:0000139: Golgi membrane	2.97E-02
17	GO:0005794: Golgi apparatus	3.39E-02
18	GO:0005681: spliceosomal complex	3.98E-02