co-expression network

GO Enrichment Analysis of Co-expressed Genes with

GRMZM2G082998

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0071486: cellular response to high light intensity	0.00E+00
2	GO:0009234: menaquinone biosynthetic process	0.00E+00
3	GO:0006412: translation	3.79E-09
4	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	6.66E-08
5	GO:0032544: plastid translation	2.73E-06
6	GO:0045036: protein targeting to chloroplast	1.45E-05
7	GO:0010207: photosystem II assembly	1.01E-04
8	GO:0010206: photosystem II repair	1.07E-04
9	GO:0008361: regulation of cell size	2.62E-04
10	GO:0006573: valine metabolic process	2.62E-04
11	GO:0019253: reductive pentose-phosphate cycle	2.62E-04
12	GO:0019676: ammonia assimilation cycle	2.62E-04
13	GO:0006098: pentose-phosphate shunt	3.09E-04
14	GO:0006354: DNA-templated transcription, elongation	3.27E-04
15	GO:0042372: phylloquinone biosynthetic process	6.18E-04
16	GO:0048653: anther development	6.18E-04
17	GO:0044272: sulfur compound biosynthetic process	6.18E-04
18	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	6.18E-04
19	GO:0015995: chlorophyll biosynthetic process	6.64E-04
20	GO:0019684: photosynthesis, light reaction	8.90E-04
21	GO:0010155: regulation of proton transport	1.01E-03
22	GO:0006733: oxidoreduction coenzyme metabolic process	1.06E-03
23	GO:0034599: cellular response to oxidative stress	1.06E-03
24	GO:0007389: pattern specification process	1.55E-03
25	GO:0019216: regulation of lipid metabolic process	1.55E-03
26	GO:0009117: nucleotide metabolic process	1.55E-03
27	GO:0000096: sulfur amino acid metabolic process	2.08E-03
28	GO:0009088: threonine biosynthetic process	2.08E-03
29	GO:0050790: regulation of catalytic activity	2.08E-03
30	GO:0019748: secondary metabolic process	2.08E-03
31	GO:0007568: aging	2.08E-03
32	GO:0006662: glycerol ether metabolic process	2.63E-03
33	GO:0006542: glutamine biosynthetic process	2.65E-03
34	GO:0000105: histidine biosynthetic process	2.65E-03
35	GO:0016117: carotenoid biosynthetic process	2.84E-03
36	GO:0009637: response to blue light	2.84E-03
37	GO:0010114: response to red light	3.30E-03
38	GO:0009108: coenzyme biosynthetic process	3.31E-03
39	GO:0006801: superoxide metabolic process	3.31E-03
40	GO:0009926: auxin polar transport	3.31E-03
41	GO:0009106: lipoate metabolic process	3.31E-03
42	GO:0010205: photoinhibition	3.31E-03
43	GO:0006766: vitamin metabolic process	3.31E-03
44	GO:0009411: response to UV	3.31E-03
45	GO:0010218: response to far red light	3.80E-03
46	GO:0008295: spermidine biosynthetic process	4.02E-03
47	GO:0040007: growth	4.77E-03
48	GO:0010015: root morphogenesis	4.77E-03
49	GO:0015977: carbon fixation	4.77E-03
50	GO:0048868: pollen tube development	4.77E-03
51	GO:0009072: aromatic amino acid family metabolic process	4.77E-03
52	GO:0009407: toxin catabolic process	5.55E-03
53	GO:0010411: xyloglucan metabolic process	5.55E-03
54	GO:0009832: plant-type cell wall biogenesis	5.55E-03
55	GO:0008652: cellular amino acid biosynthetic process	5.80E-03
56	GO:0006073: cellular glucan metabolic process	6.38E-03
57	GO:0016556: mRNA modification	6.38E-03
58	GO:0006546: glycine catabolic process	7.27E-03
59	GO:0042546: cell wall biogenesis	8.18E-03
60	GO:0006655: phosphatidylglycerol biosynthetic process	9.13E-03
61	GO:0009767: photosynthetic electron transport chain	9.13E-03
62	GO:0031408: oxylipin biosynthetic process	9.13E-03
63	GO:0042793: transcription from plastid promoter	9.13E-03
64	GO:0007030: Golgi organization	1.01E-02
65	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	1.01E-02
66	GO:0010075: regulation of meristem growth	1.01E-02
67	GO:0009750: response to fructose	1.11E-02
68	GO:0006833: water transport	1.11E-02
69	GO:0006972: hyperosmotic response	1.11E-02
70	GO:0009416: response to light stimulus	1.17E-02
71	GO:0010027: thylakoid membrane organization	1.17E-02
72	GO:0009749: response to glucose	1.22E-02
73	GO:0009664: plant-type cell wall organization	1.33E-02
74	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	1.33E-02
75	GO:0035304: regulation of protein dephosphorylation	1.56E-02
76	GO:0046777: protein autophosphorylation	1.56E-02
77	GO:0006807: nitrogen compound metabolic process	1.56E-02
78	GO:0009817: defense response to fungus, incompatible interaction	1.68E-02
79	GO:0009695: jasmonic acid biosynthetic process	1.68E-02
80	GO:0009853: photorespiration	2.07E-02
81	GO:0009902: chloroplast relocation	2.20E-02
82	GO:0006520: cellular amino acid metabolic process	2.20E-02
83	GO:0045454: cell redox homeostasis	2.26E-02
84	GO:0009735: response to cytokinin	2.48E-02
85	GO:0006364: rRNA processing	2.68E-02
86	GO:0019344: cysteine biosynthetic process	2.76E-02
87	GO:0009790: embryo development	2.91E-02
88	GO:0009409: response to cold	3.20E-02
89	GO:0000023: maltose metabolic process	3.53E-02
90	GO:0009658: chloroplast organization	3.69E-02
91	GO:0009744: response to sucrose	4.03E-02
92	GO:0009644: response to high light intensity	4.72E-02
93	GO:0030001: metal ion transport	4.90E-02
94	GO:0022900: electron transport chain	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0030267: glyoxylate reductase (NADP) activity	0.00E+00
2	GO:0046863: ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity	0.00E+00
3	GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity	0.00E+00
4	GO:0004802: transketolase activity	0.00E+00
5	GO:0004399: histidinol dehydrogenase activity	0.00E+00
6	GO:0003735: structural constituent of ribosome	1.12E-08
7	GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity	2.62E-04
8	GO:0004795: threonine synthase activity	2.62E-04
9	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	6.18E-04
10	GO:0045485: omega-6 fatty acid desaturase activity	6.18E-04
11	GO:0016984: ribulose-bisphosphate carboxylase activity	1.55E-03
12	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	2.08E-03
13	GO:0030234: enzyme regulator activity	2.08E-03
14	GO:0004356: glutamate-ammonia ligase activity	2.65E-03
15	GO:0004784: superoxide dismutase activity	4.02E-03
16	GO:0042578: phosphoric ester hydrolase activity	4.77E-03
17	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	5.55E-03
18	GO:0016762: xyloglucan:xyloglucosyl transferase activity	6.38E-03
19	GO:0043531: ADP binding	7.27E-03
20	GO:0003993: acid phosphatase activity	8.18E-03
21	GO:0015035: protein disulfide oxidoreductase activity	9.09E-03
22	GO:0051287: NAD binding	9.94E-03
23	GO:0019901: protein kinase binding	1.11E-02
24	GO:0051537: 2 iron, 2 sulfur cluster binding	1.68E-02
25	GO:0019843: rRNA binding	2.07E-02
26	GO:0009055: electron carrier activity	3.85E-02
27	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	4.72E-02

Rank	GO Term	Adjusted P value
1	GO:0009570: chloroplast stroma	3.37E-21
2	GO:0009507: chloroplast	5.85E-20
3	GO:0009941: chloroplast envelope	3.95E-16
4	GO:0005840: ribosome	3.88E-10
5	GO:0009579: thylakoid	4.27E-09
6	GO:0009535: chloroplast thylakoid membrane	1.54E-06
7	GO:0030529: intracellular ribonucleoprotein complex	2.99E-05
8	GO:0000311: plastid large ribosomal subunit	2.62E-04
9	GO:0009543: chloroplast thylakoid lumen	5.72E-04
10	GO:0005622: intracellular	2.24E-03
11	GO:0048046: apoplast	2.37E-03
12	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	2.65E-03
13	GO:0015935: small ribosomal subunit	3.55E-03
14	GO:0009295: nucleoid	7.27E-03
15	GO:0009536: plastid	2.15E-02
16	GO:0010319: stromule	3.06E-02
17	GO:0015934: large ribosomal subunit	3.06E-02
18	GO:0031977: thylakoid lumen	3.22E-02
19	GO:0009534: chloroplast thylakoid	4.55E-02
20	GO:0010287: plastoglobule	4.55E-02